RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 ABHD2P08910 425 aa7.02□□□□□ -1.29
TRIM38-201ENST00000357085 SNX1Q13596 522 aa7.02□□□□□ -1.29
TRIM38-201ENST00000357085 PRR23CQ6ZRP0 262 aa7.02□□□□□ -1.29
TRIM38-201ENST00000357085 ILDR1Q86SU0 546 aaPredicted RBP7.02□□□□□ -1.29
TRIM38-201ENST00000357085 AP1M1Q9BXS5 423 aa7.02□□□□□ -1.29
TRIM38-201ENST00000357085 CHMP2BQ9UQN3 213 aa7.02□□□□□ -1.29
TRIM38-201ENST00000357085 NDUFB9Q9Y6M9 179 aa7.02□□□□□ -1.29
TRIM38-201ENST00000357085 C4AP0C0L4 1744 aa7.02□□□□□ -1.29
TRIM38-201ENST00000357085 C4BP0C0L5 1744 aa7.02□□□□□ -1.29
TRIM38-201ENST00000357085 ARHGAP42A6NI28 874 aa7.01□□□□□ -1.29
TRIM38-201ENST00000357085 COBLO75128 1261 aa7.01□□□□□ -1.29
TRIM38-201ENST00000357085 KIAA1755Q5JYT7 1200 aa7.01□□□□□ -1.29
TRIM38-201ENST00000357085 ZNF804AQ7Z570 1209 aa7.01□□□□□ -1.29
TRIM38-201ENST00000357085 DGKHQ86XP1 1220 aa7.01□□□□□ -1.29
TRIM38-201ENST00000357085 LRRC34Q8IZ02 419 aa7.01□□□□□ -1.29
TRIM38-201ENST00000357085 USHBP1Q8N6Y0 703 aa7.01□□□□□ -1.29
TRIM38-201ENST00000357085 MAGEB6Q8N7X4 407 aa7.01□□□□□ -1.29
TRIM38-201ENST00000357085 RIN3Q8TB24 985 aa7.01□□□□□ -1.29
TRIM38-201ENST00000357085 SMCR8Q8TEV9 937 aaPredicted RBP7.01□□□□□ -1.29
TRIM38-201ENST00000357085 STAMQ92783 540 aa7.01□□□□□ -1.29
TRIM38-201ENST00000357085 MYL10Q9BUA6 226 aa7.01□□□□□ -1.29
TRIM38-201ENST00000357085 MKNK1Q9BUB5 465 aa7.01□□□□□ -1.29
TRIM38-201ENST00000357085 TBCCD1Q9NVR7 557 aa7.01□□□□□ -1.29
TRIM38-201ENST00000357085 SEL1LQ9UBV2 794 aa7.01□□□□□ -1.29
TRIM38-201ENST00000357085 RBAK-RBAKDNI3L0D1 243 aa7.01□□□□□ -1.29
TRIM38-201ENST00000357085 EXOC3O60645 756 aa7.01□□□□□ -1.29
TRIM38-201ENST00000357085 UBOX5O94941 541 aa7.01□□□□□ -1.29
TRIM38-201ENST00000357085 FOSP01100 380 aaPredicted RBP7.01□□□□□ -1.29
TRIM38-201ENST00000357085 VIL1P09327 827 aaKnown RBP7.01□□□□□ -1.29
TRIM38-201ENST00000357085 CDC27P30260 824 aa7.01□□□□□ -1.29
TRIM38-201ENST00000357085 HDAC4P56524 1084 aa7.01□□□□□ -1.29
TRIM38-201ENST00000357085 PPP2R5CQ13362 524 aa7.01□□□□□ -1.29
TRIM38-201ENST00000357085 NEK10Q6ZWH5 1172 aa7.01□□□□□ -1.29
TRIM38-201ENST00000357085 TMC3Q7Z5M5 1100 aa7.01□□□□□ -1.29
TRIM38-201ENST00000357085 TSEN2Q8NCE0 465 aaKnown RBP7.01□□□□□ -1.29
TRIM38-201ENST00000357085 CYP39A1Q9NYL5 469 aa7.01□□□□□ -1.29
TRIM38-201ENST00000357085 ZNF532Q9HCE3 1301 aa7.01□□□□□ -1.29
TRIM38-201ENST00000357085 RAD51CO43502 376 aa7.01□□□□□ -1.29
TRIM38-201ENST00000357085 RFC5P40937 340 aa7.01□□□□□ -1.29
TRIM38-201ENST00000357085 HERVK_113P62684 666 aa7.01□□□□□ -1.29
TRIM38-201ENST00000357085 RNF43Q68DV7 783 aa7.01□□□□□ -1.29
TRIM38-201ENST00000357085 ATP11CQ8NB49 1132 aa7.01□□□□□ -1.29
TRIM38-201ENST00000357085 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.01□□□□□ -1.29
TRIM38-201ENST00000357085 CHP1Q99653 195 aa7.01□□□□□ -1.29
TRIM38-201ENST00000357085 UNC45AQ9H3U1 944 aa7.01□□□□□ -1.29
TRIM38-201ENST00000357085 SLX4Q8IY92 1834 aa7.01□□□□□ -1.29
TRIM38-201ENST00000357085 MAN1A2O60476 641 aa7.01□□□□□ -1.29
TRIM38-201ENST00000357085 MLH1P40692 756 aa7.01□□□□□ -1.29
TRIM38-201ENST00000357085 CDCA2Q69YH5 1023 aaPredicted RBP7.01□□□□□ -1.29
TRIM38-201ENST00000357085 ALKBH5Q6P6C2 394 aaKnown RBP7.01□□□□□ -1.29
TRIM38-201ENST00000357085 LENG1Q96BZ8 264 aaPredicted RBP7.01□□□□□ -1.29
TRIM38-201ENST00000357085 ERP44Q9BS26 406 aa7.01□□□□□ -1.29
TRIM38-201ENST00000357085 TBC1D7Q9P0N9 293 aa7.01□□□□□ -1.29
TRIM38-201ENST00000357085 BTBD7Q9P203 1132 aa7.01□□□□□ -1.29
TRIM38-201ENST00000357085 PYGLP06737 847 aa7.01□□□□□ -1.29
TRIM38-201ENST00000357085 RARGP13631 454 aa7.01□□□□□ -1.29
TRIM38-201ENST00000357085 ATF3P18847 181 aa7.01□□□□□ -1.29
TRIM38-201ENST00000357085 CDC25AP30304 524 aa7.01□□□□□ -1.29
TRIM38-201ENST00000357085 SERPINB6P35237 376 aa7.01□□□□□ -1.29
TRIM38-201ENST00000357085 WDR44Q5JSH3 913 aa7.01□□□□□ -1.29
TRIM38-201ENST00000357085 ZFP1Q6P2D0 407 aa7.01□□□□□ -1.29
TRIM38-201ENST00000357085 C16orf87Q6PH81 154 aa7.01□□□□□ -1.29
TRIM38-201ENST00000357085 VPS50Q96JG6 964 aa7.01□□□□□ -1.29
TRIM38-201ENST00000357085 PSMC3IPQ9P2W1 217 aaPredicted RBP7.01□□□□□ -1.29
TRIM38-201ENST00000357085 PCDHB6Q9Y5E3 794 aa7.01□□□□□ -1.29
TRIM38-201ENST00000357085 MICAL3Q7RTP6 2002 aa7.01□□□□□ -1.29
TRIM38-201ENST00000357085 EYA4O95677 639 aa7.01□□□□□ -1.29
TRIM38-201ENST00000357085 PBX1P40424 430 aa7.01□□□□□ -1.29
TRIM38-201ENST00000357085 ANKS1AQ92625 1134 aa7.01□□□□□ -1.29
TRIM38-201ENST00000357085 EDC3Q96F86 508 aaKnown RBP7.01□□□□□ -1.29
TRIM38-201ENST00000357085 NDNQ99608 321 aa7.01□□□□□ -1.29
TRIM38-201ENST00000357085 ROBO3Q96MS0 1386 aa7.01□□□□□ -1.29
TRIM38-201ENST00000357085 PPP1R3GB7ZBB8 358 aa7.01□□□□□ -1.29
TRIM38-201ENST00000357085 TTLL1O95922 423 aa7.01□□□□□ -1.29
TRIM38-201ENST00000357085 ADD2P35612 726 aa7.01□□□□□ -1.29
TRIM38-201ENST00000357085 ARL4CP56559 192 aa7.01□□□□□ -1.29
TRIM38-201ENST00000357085 DIXDC1Q155Q3 683 aa7.01□□□□□ -1.29
TRIM38-201ENST00000357085 TRIM72Q6ZMU5 477 aa7.01□□□□□ -1.29
TRIM38-201ENST00000357085 TMCO5AQ8N6Q1 288 aa7.01□□□□□ -1.29
TRIM38-201ENST00000357085 TTC13Q8NBP0 860 aa7.01□□□□□ -1.29
TRIM38-201ENST00000357085 OR2W6PQ8NHA6 318 aa7.01□□□□□ -1.29
TRIM38-201ENST00000357085 CASP10Q92851 521 aa7.01□□□□□ -1.29
TRIM38-201ENST00000357085 ERP27Q96DN0 273 aa7.01□□□□□ -1.29
TRIM38-201ENST00000357085 MCF2P10911 925 aa7□□□□□ -1.29
TRIM38-201ENST00000357085 SLC1A4P43007 532 aa7□□□□□ -1.29
TRIM38-201ENST00000357085 ENOSF1Q7L5Y1 443 aa7□□□□□ -1.29
TRIM38-201ENST00000357085 EPSTI1Q96J88 318 aa7□□□□□ -1.29
TRIM38-201ENST00000357085 MRPL47Q9HD33 250 aaKnown RBP7□□□□□ -1.29
TRIM38-201ENST00000357085 NLRC4Q9NPP4 1024 aa7□□□□□ -1.29
TRIM38-201ENST00000357085 V9GY48 417 aaPredicted RBP7□□□□□ -1.29
TRIM38-201ENST00000357085 METP08581 1390 aa7□□□□□ -1.29
TRIM38-201ENST00000357085 ESYT2A0FGR8 921 aa7□□□□□ -1.29
TRIM38-201ENST00000357085 AGPSO00116 658 aa7□□□□□ -1.29
TRIM38-201ENST00000357085 NUP107P57740 925 aa7□□□□□ -1.29
TRIM38-201ENST00000357085 PFKFB3Q16875 520 aaPredicted RBP7□□□□□ -1.29
TRIM38-201ENST00000357085 CREG2Q8IUH2 290 aa7□□□□□ -1.29
TRIM38-201ENST00000357085 IFNL3Q8IZI9 196 aa7□□□□□ -1.29
TRIM38-201ENST00000357085 PDIK1LQ8N165 341 aa7□□□□□ -1.29
TRIM38-201ENST00000357085 WDR60Q8WVS4 1066 aa7□□□□□ -1.29
TRIM38-201ENST00000357085 CCT6BQ92526 530 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms