RNA–Protein interactions for RNA: ENST00000331728.8

LIMK2-201, Transcript of LIM domain kinase 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIMK2, Length 3,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-201ENST00000331728 PPM1KQ8N3J5 372 aa9.4□□□□□ -0.9
LIMK2-201ENST00000331728 FBXO25Q8TCJ0 367 aa9.4□□□□□ -0.9
LIMK2-201ENST00000331728 FAM163AQ96GL9 167 aaPredicted RBP9.4□□□□□ -0.9
LIMK2-201ENST00000331728 COA1Q9GZY4 146 aa9.4□□□□□ -0.9
LIMK2-201ENST00000331728 THAP2Q9H0W7 228 aa9.4□□□□□ -0.9
LIMK2-201ENST00000331728 PABPC3Q9H361 631 aaKnown RBP9.4□□□□□ -0.9
LIMK2-201ENST00000331728 NKIRAS1Q9NYS0 192 aa9.4□□□□□ -0.9
LIMK2-201ENST00000331728 ZBTB21Q9ULJ3 1066 aa9.4□□□□□ -0.9
LIMK2-201ENST00000331728 BCS1LQ9Y276 419 aa9.4□□□□□ -0.9
LIMK2-201ENST00000331728 GAKO14976 1311 aa9.4□□□□□ -0.9
LIMK2-201ENST00000331728 A0A1W2PRG0 241 aa9.4□□□□□ -0.9
LIMK2-201ENST00000331728 GTPBP10A4D1E9 387 aaKnown RBP9.4□□□□□ -0.9
LIMK2-201ENST00000331728 PHF2O75151 1096 aa9.4□□□□□ -0.9
LIMK2-201ENST00000331728 SNHG28P0DPA3 235 aa9.4□□□□□ -0.9
LIMK2-201ENST00000331728 KCNA1Q09470 495 aa9.4□□□□□ -0.9
LIMK2-201ENST00000331728 MAPK7Q13164 816 aa9.4□□□□□ -0.9
LIMK2-201ENST00000331728 CCDC38Q502W7 563 aa9.4□□□□□ -0.9
LIMK2-201ENST00000331728 CCDC174Q6PII3 467 aa9.4□□□□□ -0.9
LIMK2-201ENST00000331728 MOXD1Q6UVY6 613 aa9.4□□□□□ -0.9
LIMK2-201ENST00000331728 OTUD6AQ7L8S5 288 aa9.4□□□□□ -0.9
LIMK2-201ENST00000331728 ZNF653Q96CK0 615 aa9.4□□□□□ -0.9
LIMK2-201ENST00000331728 TLCD1Q96CP7 247 aa9.4□□□□□ -0.9
LIMK2-201ENST00000331728 IFT74Q96LB3 600 aa9.4□□□□□ -0.9
LIMK2-201ENST00000331728 AGPAT1Q99943 283 aa9.4□□□□□ -0.9
LIMK2-201ENST00000331728 CCDC77Q9BR77 488 aa9.4□□□□□ -0.9
LIMK2-201ENST00000331728 DDX4Q9NQI0 724 aaKnown RBP9.4□□□□□ -0.9
LIMK2-201ENST00000331728 ALG6Q9Y672 507 aa9.4□□□□□ -0.9
LIMK2-201ENST00000331728 KIAA1551Q9HCM1 1747 aa9.4□□□□□ -0.91
LIMK2-201ENST00000331728 PPEF1O14829 653 aaPredicted RBP9.4□□□□□ -0.91
LIMK2-201ENST00000331728 PPIP5K2O43314 1243 aa9.4□□□□□ -0.91
LIMK2-201ENST00000331728 ECEL1O95672 775 aa9.4□□□□□ -0.91
LIMK2-201ENST00000331728 BMP3P12645 472 aa9.4□□□□□ -0.91
LIMK2-201ENST00000331728 SHMT1P34896 483 aa9.4□□□□□ -0.91
LIMK2-201ENST00000331728 GJC1P36383 396 aa9.4□□□□□ -0.91
LIMK2-201ENST00000331728 VPS41P49754 854 aa9.4□□□□□ -0.91
LIMK2-201ENST00000331728 SLC29A2Q14542 456 aa9.4□□□□□ -0.91
LIMK2-201ENST00000331728 ZKSCAN8Q15776 578 aaPredicted RBP9.4□□□□□ -0.91
LIMK2-201ENST00000331728 ABCB5Q2M3G0 1257 aa9.4□□□□□ -0.91
LIMK2-201ENST00000331728 RBM26Q5T8P6 1007 aaKnown RBP9.4□□□□□ -0.91
LIMK2-201ENST00000331728 CCDC137Q6PK04 289 aaKnown RBP9.4□□□□□ -0.91
LIMK2-201ENST00000331728 LNX1Q8TBB1 728 aaPredicted RBP9.4□□□□□ -0.91
LIMK2-201ENST00000331728 NACC1Q96RE7 527 aa9.4□□□□□ -0.91
LIMK2-201ENST00000331728 TRIM6Q9C030 488 aaPredicted RBP9.4□□□□□ -0.91
LIMK2-201ENST00000331728 TMOD2Q9NZR1 351 aa9.4□□□□□ -0.91
LIMK2-201ENST00000331728 CTDP1Q9Y5B0 961 aaPredicted RBP9.4□□□□□ -0.91
LIMK2-201ENST00000331728 PCDHA2Q9Y5H9 948 aa9.4□□□□□ -0.91
LIMK2-201ENST00000331728 ASTN1O14525 1302 aa9.39□□□□□ -0.91
LIMK2-201ENST00000331728 BHMG1C9JSJ3 638 aaPredicted RBP9.39□□□□□ -0.91
LIMK2-201ENST00000331728 F5H6K3 240 aa9.39□□□□□ -0.91
LIMK2-201ENST00000331728 MSH4O15457 936 aa9.39□□□□□ -0.91
LIMK2-201ENST00000331728 PPFIA2O75334 1257 aa9.39□□□□□ -0.91
LIMK2-201ENST00000331728 ECM2O94769 699 aaPredicted RBP9.39□□□□□ -0.91
LIMK2-201ENST00000331728 SUN1O94901 812 aa9.39□□□□□ -0.91
LIMK2-201ENST00000331728 ACSL3O95573 720 aa9.39□□□□□ -0.91
LIMK2-201ENST00000331728 AGTP01019 485 aa9.39□□□□□ -0.91
LIMK2-201ENST00000331728 CLK2P49760 499 aaKnown RBP9.39□□□□□ -0.91
LIMK2-201ENST00000331728 GPC5P78333 572 aa9.39□□□□□ -0.91
LIMK2-201ENST00000331728 KLRC3Q07444 240 aa9.39□□□□□ -0.91
LIMK2-201ENST00000331728 ITIH4Q14624 930 aa9.39□□□□□ -0.91
LIMK2-201ENST00000331728 PPP2R5AQ15172 486 aa9.39□□□□□ -0.91
LIMK2-201ENST00000331728 SPDYCQ5MJ68 293 aa9.39□□□□□ -0.91
LIMK2-201ENST00000331728 RINT1Q6NUQ1 792 aa9.39□□□□□ -0.91
LIMK2-201ENST00000331728 RPUSD2Q8IZ73 545 aaKnown RBP9.39□□□□□ -0.91
LIMK2-201ENST00000331728 RASGEF1CQ8N431 466 aa9.39□□□□□ -0.91
LIMK2-201ENST00000331728 HES6Q96HZ4 224 aa9.39□□□□□ -0.91
LIMK2-201ENST00000331728 PRMT1Q99873 361 aaKnown RBP9.39□□□□□ -0.91
LIMK2-201ENST00000331728 LARSQ9P2J5 1176 aaKnown RBP9.39□□□□□ -0.91
LIMK2-201ENST00000331728 ZNF219Q9P2Y4 722 aaPredicted RBP9.39□□□□□ -0.91
LIMK2-201ENST00000331728 POLLQ9UGP5 575 aa9.39□□□□□ -0.91
LIMK2-201ENST00000331728 CFAP73A6NFT4 308 aa9.39□□□□□ -0.91
LIMK2-201ENST00000331728 EIF3DO15371 548 aaKnown RBP eCLIP9.39□□□□□ -0.91
LIMK2-201ENST00000331728 ASAP2O43150 1006 aa9.39□□□□□ -0.91
LIMK2-201ENST00000331728 STX2P32856 288 aa9.39□□□□□ -0.91
LIMK2-201ENST00000331728 CETN2P41208 172 aa9.39□□□□□ -0.91
LIMK2-201ENST00000331728 LACTBP83111 547 aaPredicted RBP9.39□□□□□ -0.91
LIMK2-201ENST00000331728 SNX1Q13596 522 aa9.39□□□□□ -0.91
LIMK2-201ENST00000331728 EP400NLQ6ZTU2 488 aa9.39□□□□□ -0.91
LIMK2-201ENST00000331728 LRRC34Q8IZ02 419 aa9.39□□□□□ -0.91
LIMK2-201ENST00000331728 CCHCR1Q8TD31 782 aa9.39□□□□□ -0.91
LIMK2-201ENST00000331728 C18orf8Q96DM3 657 aa9.39□□□□□ -0.91
LIMK2-201ENST00000331728 ARHGEF26Q96DR7 871 aa9.39□□□□□ -0.91
LIMK2-201ENST00000331728 MKNK1Q9BUB5 465 aa9.39□□□□□ -0.91
LIMK2-201ENST00000331728 SEL1LQ9UBV2 794 aa9.39□□□□□ -0.91
LIMK2-201ENST00000331728 PFASO15067 1338 aa9.39□□□□□ -0.91
LIMK2-201ENST00000331728 COL14A1Q05707 1796 aaKnown RBP9.39□□□□□ -0.91
LIMK2-201ENST00000331728 GAS8O95995 478 aa9.38□□□□□ -0.91
LIMK2-201ENST00000331728 POLR2MP0CAP2 368 aa9.38□□□□□ -0.91
LIMK2-201ENST00000331728 KRT5P13647 590 aa9.38□□□□□ -0.91
LIMK2-201ENST00000331728 PAX7P23759 505 aa9.38□□□□□ -0.91
LIMK2-201ENST00000331728 GCLMP48507 274 aa9.38□□□□□ -0.91
LIMK2-201ENST00000331728 MXI1P50539 228 aa9.38□□□□□ -0.91
LIMK2-201ENST00000331728 PDE6CP51160 858 aa9.38□□□□□ -0.91
LIMK2-201ENST00000331728 MYO1EQ12965 1108 aa9.38□□□□□ -0.91
LIMK2-201ENST00000331728 SGO2Q562F6 1265 aa9.38□□□□□ -0.91
LIMK2-201ENST00000331728 CDC42EP5Q6NZY7 148 aa9.38□□□□□ -0.91
LIMK2-201ENST00000331728 C15orf52Q6ZUT6 534 aaKnown RBP9.38□□□□□ -0.91
LIMK2-201ENST00000331728 VTI1AQ96AJ9 217 aa9.38□□□□□ -0.91
LIMK2-201ENST00000331728 DNAJC17Q9NVM6 304 aaKnown RBP9.38□□□□□ -0.91
LIMK2-201ENST00000331728 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.38□□□□□ -0.912e-13■■□□□ 14.2
LIMK2-201ENST00000331728 ATF5Q9Y2D1 282 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms