RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 NDC80O14777 642 aa13.68□□□□□ -0.22
DNMT3A-202ENST00000321117 RASA4O43374 803 aa13.68□□□□□ -0.22
DNMT3A-202ENST00000321117 MED24O75448 989 aa13.68□□□□□ -0.22
DNMT3A-202ENST00000321117 SERPINB2P05120 415 aa13.68□□□□□ -0.22
DNMT3A-202ENST00000321117 CASP4P49662 377 aa13.68□□□□□ -0.22
DNMT3A-202ENST00000321117 GPSM2P81274 684 aa13.68□□□□□ -0.22
DNMT3A-202ENST00000321117 MAPK7Q13164 816 aa13.68□□□□□ -0.22
DNMT3A-202ENST00000321117 TMEM119Q4V9L6 283 aa13.68□□□□□ -0.22
DNMT3A-202ENST00000321117 ANKRD20A8PQ5CZ79 823 aa13.68□□□□□ -0.22
DNMT3A-202ENST00000321117 CCDC89Q8N998 374 aa13.68□□□□□ -0.22
DNMT3A-202ENST00000321117 FBXO25Q8TCJ0 367 aa13.68□□□□□ -0.22
DNMT3A-202ENST00000321117 MORC4Q8TE76 937 aa13.68□□□□□ -0.22
DNMT3A-202ENST00000321117 C1orf54Q8WWF1 131 aa13.68□□□□□ -0.22
DNMT3A-202ENST00000321117 MTMR9Q96QG7 549 aa13.68□□□□□ -0.22
DNMT3A-202ENST00000321117 SLC24A3Q9HC58 644 aa13.68□□□□□ -0.22
DNMT3A-202ENST00000321117 OSGEPQ9NPF4 335 aa13.68□□□□□ -0.22
DNMT3A-202ENST00000321117 SPATS2LQ9NUQ6 558 aaKnown RBP13.68□□□□□ -0.22
DNMT3A-202ENST00000321117 SALL4Q9UJQ4 1053 aa13.68□□□□□ -0.22
DNMT3A-202ENST00000321117 ARFGEF2Q9Y6D5 1785 aa13.68□□□□□ -0.22
DNMT3A-202ENST00000321117 LRRD1A4D1F6 860 aa13.68□□□□□ -0.22
DNMT3A-202ENST00000321117 ECM2O94769 699 aaPredicted RBP13.68□□□□□ -0.22
DNMT3A-202ENST00000321117 PHBP35232 272 aa13.68□□□□□ -0.22
DNMT3A-202ENST00000321117 NFIXQ14938 502 aa13.68□□□□□ -0.22
DNMT3A-202ENST00000321117 COBLL1Q53SF7 1204 aa13.68□□□□□ -0.22
DNMT3A-202ENST00000321117 SPATA21Q7Z572 469 aa13.68□□□□□ -0.22
DNMT3A-202ENST00000321117 XXYLT1Q8NBI6 393 aa13.68□□□□□ -0.22
DNMT3A-202ENST00000321117 TRIM11Q96F44 468 aa13.68□□□□□ -0.22
DNMT3A-202ENST00000321117 FAM129AQ9BZQ8 928 aa13.68□□□□□ -0.22
DNMT3A-202ENST00000321117 BCS1LQ9Y276 419 aa13.68□□□□□ -0.22
DNMT3A-202ENST00000321117 VAMP7P51809 220 aa13.67□□□□□ -0.22
DNMT3A-202ENST00000321117 BPIFB4P59827 614 aa13.67□□□□□ -0.22
DNMT3A-202ENST00000321117 TRADDQ15628 312 aa13.67□□□□□ -0.22
DNMT3A-202ENST00000321117 LONRF1Q17RB8 773 aa13.67□□□□□ -0.22
DNMT3A-202ENST00000321117 BARGINQ6ZT62 677 aa13.67□□□□□ -0.22
DNMT3A-202ENST00000321117 SHISA4Q96DD7 197 aa13.67□□□□□ -0.22
DNMT3A-202ENST00000321117 ARL2BPQ9Y2Y0 163 aa13.67□□□□□ -0.22
DNMT3A-202ENST00000321117 DAGLAQ9Y4D2 1042 aa13.67□□□□□ -0.22
DNMT3A-202ENST00000321117 MAPK13O15264 365 aa13.67□□□□□ -0.22
DNMT3A-202ENST00000321117 AKAP3O75969 853 aa13.67□□□□□ -0.22
DNMT3A-202ENST00000321117 CACNB3P54284 484 aa13.67□□□□□ -0.22
DNMT3A-202ENST00000321117 NPEPPSP55786 919 aa13.67□□□□□ -0.22
DNMT3A-202ENST00000321117 BFSP1Q12934 665 aa13.67□□□□□ -0.22
DNMT3A-202ENST00000321117 PALM2Q8IXS6 379 aa13.67□□□□□ -0.22
DNMT3A-202ENST00000321117 SYT2Q8N9I0 419 aaPredicted RBP13.67□□□□□ -0.22
DNMT3A-202ENST00000321117 FGFR1OP2Q9NVK5 253 aa13.67□□□□□ -0.22
DNMT3A-202ENST00000321117 DCCP43146 1447 aa13.67□□□□□ -0.22
DNMT3A-202ENST00000321117 TNS2Q63HR2 1409 aa13.67□□□□□ -0.22
DNMT3A-202ENST00000321117 A0A0A6YYK5 440 aaPredicted RBP13.67□□□□□ -0.22
DNMT3A-202ENST00000321117 TBX3O15119 743 aa13.67□□□□□ -0.22
DNMT3A-202ENST00000321117 KCNJ1P48048 391 aa13.67□□□□□ -0.22
DNMT3A-202ENST00000321117 HEMGNQ9BXL5 484 aa13.67□□□□□ -0.22
DNMT3A-202ENST00000321117 SRRM3A6NNA2 597 aaPredicted RBP13.67□□□□□ -0.22
DNMT3A-202ENST00000321117 LCA5LO95447 670 aa13.67□□□□□ -0.22
DNMT3A-202ENST00000321117 PRELPP51888 382 aa13.67□□□□□ -0.22
DNMT3A-202ENST00000321117 KRT17Q04695 432 aa13.67□□□□□ -0.22
DNMT3A-202ENST00000321117 DMP1Q13316 513 aaPredicted RBP13.67□□□□□ -0.22
DNMT3A-202ENST00000321117 ZC2HC1CQ53FD0 456 aaPredicted RBP13.67□□□□□ -0.22
DNMT3A-202ENST00000321117 EPM2AIP1Q7L775 607 aaPredicted RBP13.67□□□□□ -0.22
DNMT3A-202ENST00000321117 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.67□□□□□ -0.22
DNMT3A-202ENST00000321117 THAP2Q9H0W7 228 aa13.67□□□□□ -0.22
DNMT3A-202ENST00000321117 KDM4CQ9H3R0 1056 aa13.67□□□□□ -0.22
DNMT3A-202ENST00000321117 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.67□□□□□ -0.22
DNMT3A-202ENST00000321117 F5H6K3 240 aa13.66□□□□□ -0.22
DNMT3A-202ENST00000321117 STAT2P52630 851 aa13.66□□□□□ -0.22
DNMT3A-202ENST00000321117 CAV1Q03135 178 aa13.66□□□□□ -0.22
DNMT3A-202ENST00000321117 KLRC3Q07444 240 aa13.66□□□□□ -0.22
DNMT3A-202ENST00000321117 ALCAMQ13740 583 aa13.66□□□□□ -0.22
DNMT3A-202ENST00000321117 TRMT10CQ7L0Y3 403 aaKnown RBP13.66□□□□□ -0.22
DNMT3A-202ENST00000321117 KCNV2Q8TDN2 545 aa13.66□□□□□ -0.22
DNMT3A-202ENST00000321117 COA1Q9GZY4 146 aa13.66□□□□□ -0.22
DNMT3A-202ENST00000321117 GGA2Q9UJY4 613 aa13.66□□□□□ -0.22
DNMT3A-202ENST00000321117 RSPH10B2B2RC85 870 aa13.66□□□□□ -0.22
DNMT3A-202ENST00000321117 ADAMTS3O15072 1205 aa13.66□□□□□ -0.22
DNMT3A-202ENST00000321117 RTN2O75298 545 aa13.66□□□□□ -0.22
DNMT3A-202ENST00000321117 RSPH10BP0C881 870 aa13.66□□□□□ -0.22
DNMT3A-202ENST00000321117 COMTP21964 271 aa13.66□□□□□ -0.22
DNMT3A-202ENST00000321117 SPARCL1Q14515 664 aa13.66□□□□□ -0.22
DNMT3A-202ENST00000321117 TMEM179Q6ZVK1 233 aa13.66□□□□□ -0.22
DNMT3A-202ENST00000321117 COL23A1Q86Y22 540 aaPredicted RBP13.66□□□□□ -0.22
DNMT3A-202ENST00000321117 FUKQ8N0W3 1084 aa13.66□□□□□ -0.22
DNMT3A-202ENST00000321117 MARCH10Q8NA82 808 aaPredicted RBP13.66□□□□□ -0.22
DNMT3A-202ENST00000321117 ARHGEF1Q92888 912 aaKnown RBP13.66□□□□□ -0.22
DNMT3A-202ENST00000321117 N4BP2Q86UW6 1770 aaPredicted RBP13.66□□□□□ -0.22
DNMT3A-202ENST00000321117 TMEM120BA0PK00 339 aa13.66□□□□□ -0.22
DNMT3A-202ENST00000321117 PPEF1O14829 653 aaPredicted RBP13.66□□□□□ -0.22
DNMT3A-202ENST00000321117 HNRNPDLO14979 420 aaKnown RBP13.66□□□□□ -0.22
DNMT3A-202ENST00000321117 DIAPH2O60879 1101 aa13.66□□□□□ -0.22
DNMT3A-202ENST00000321117 GIT2Q14161 759 aa13.66□□□□□ -0.22
DNMT3A-202ENST00000321117 SLC10A5Q5PT55 438 aa13.66□□□□□ -0.22
DNMT3A-202ENST00000321117 HGSNATQ68CP4 663 aa13.66□□□□□ -0.22
DNMT3A-202ENST00000321117 MKNK1Q9BUB5 465 aa13.66□□□□□ -0.22
DNMT3A-202ENST00000321117 I3L4J1 428 aa13.65□□□□□ -0.22
DNMT3A-202ENST00000321117 DKC1O60832 514 aaKnown RBP eCLIP13.65□□□□□ -0.221e-5■■■■□ 25.7
DNMT3A-202ENST00000321117 PTENP60484 403 aa13.65□□□□□ -0.22
DNMT3A-202ENST00000321117 MKRN4PQ13434 485 aaPredicted RBP13.65□□□□□ -0.22
DNMT3A-202ENST00000321117 PADI6Q6TGC4 694 aa13.65□□□□□ -0.22
DNMT3A-202ENST00000321117 TAB3Q8N5C8 712 aaPredicted RBP13.65□□□□□ -0.22
DNMT3A-202ENST00000321117 LINC00116Q8NCU8 138 aa13.65□□□□□ -0.22
DNMT3A-202ENST00000321117 SNF8Q96H20 258 aa13.65□□□□□ -0.22
DNMT3A-202ENST00000321117 MAK16Q9BXY0 300 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms