RNA–Protein interactions for RNA: ENST00000255266.9

PDE6A-201, Transcript of phosphodiesterase 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6A, Length 5,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-201ENST00000255266 CBX8Q9HC52 389 aa9.92□□□□□ -0.82
PDE6A-201ENST00000255266 FAM198AQ9UFP1 575 aa9.92□□□□□ -0.82
PDE6A-201ENST00000255266 LTBP4Q8N2S1 1624 aa9.92□□□□□ -0.82
PDE6A-201ENST00000255266 SYNJ2BP-COX16A0A087WUM0 186 aa9.92□□□□□ -0.82
PDE6A-201ENST00000255266 POTEFA5A3E0 1075 aa9.92□□□□□ -0.82
PDE6A-201ENST00000255266 FZD9O00144 591 aa9.92□□□□□ -0.82
PDE6A-201ENST00000255266 GIPC1O14908 333 aa9.92□□□□□ -0.82
PDE6A-201ENST00000255266 POTEIP0CG38 1075 aa9.92□□□□□ -0.82
PDE6A-201ENST00000255266 ODC1P11926 461 aa9.92□□□□□ -0.82
PDE6A-201ENST00000255266 NR1H3Q13133 447 aa9.92□□□□□ -0.82
PDE6A-201ENST00000255266 IKBKEQ14164 716 aa9.92□□□□□ -0.82
PDE6A-201ENST00000255266 TYW1BQ6NUM6 668 aa9.92□□□□□ -0.82
PDE6A-201ENST00000255266 POTEGQ6S5H5 508 aa9.92□□□□□ -0.82
PDE6A-201ENST00000255266 POTEEQ6S8J3 1075 aa9.92□□□□□ -0.82
PDE6A-201ENST00000255266 RAB3IL1Q8TBN0 382 aa9.92□□□□□ -0.82
PDE6A-201ENST00000255266 IFIH1Q9BYX4 1025 aaKnown RBP9.92□□□□□ -0.82
PDE6A-201ENST00000255266 COX16Q9P0S2 106 aa9.92□□□□□ -0.82
PDE6A-201ENST00000255266 GRK4P32298 578 aa9.91□□□□□ -0.82
PDE6A-201ENST00000255266 VAV2P52735 878 aa9.91□□□□□ -0.82
PDE6A-201ENST00000255266 RNASE9P60153 205 aaKnown RBP9.91□□□□□ -0.82
PDE6A-201ENST00000255266 PPP1R21Q6ZMI0 780 aa9.91□□□□□ -0.82
PDE6A-201ENST00000255266 ANAPC5Q9UJX4 755 aa9.91□□□□□ -0.82
PDE6A-201ENST00000255266 COL1A1P02452 1464 aaPredicted RBP9.91□□□□□ -0.82
PDE6A-201ENST00000255266 OR1G1P47890 313 aa9.91□□□□□ -0.82
PDE6A-201ENST00000255266 SLC12A2P55011 1212 aa9.91□□□□□ -0.82
PDE6A-201ENST00000255266 CCDC15Q0P6D6 951 aa9.91□□□□□ -0.82
PDE6A-201ENST00000255266 PTPROQ16827 1216 aa9.91□□□□□ -0.82
PDE6A-201ENST00000255266 COL16A1Q07092 1604 aaPredicted RBP9.91□□□□□ -0.82
PDE6A-201ENST00000255266 MYO1FO00160 1098 aa9.91□□□□□ -0.82
PDE6A-201ENST00000255266 IRF6O14896 467 aa9.91□□□□□ -0.82
PDE6A-201ENST00000255266 PRPSAP2O60256 369 aa9.91□□□□□ -0.82
PDE6A-201ENST00000255266 CD58P19256 250 aa9.91□□□□□ -0.82
PDE6A-201ENST00000255266 SREBF1P36956 1147 aa9.91□□□□□ -0.82
PDE6A-201ENST00000255266 Q4G0T1 1027 aa9.91□□□□□ -0.82
PDE6A-201ENST00000255266 ERICH1Q86X53 443 aa9.91□□□□□ -0.82
PDE6A-201ENST00000255266 BBOF1Q8ND07 529 aa9.91□□□□□ -0.82
PDE6A-201ENST00000255266 KAZALD1Q96I82 304 aa9.91□□□□□ -0.82
PDE6A-201ENST00000255266 KCNQ5Q9NR82 932 aa9.91□□□□□ -0.82
PDE6A-201ENST00000255266 FBXO28Q9NVF7 368 aa9.91□□□□□ -0.82
PDE6A-201ENST00000255266 LRP6O75581 1613 aa9.91□□□□□ -0.82
PDE6A-201ENST00000255266 NWD2Q9ULI1 1742 aa9.91□□□□□ -0.82
PDE6A-201ENST00000255266 A8MXQ7 604 aa9.91□□□□□ -0.82
PDE6A-201ENST00000255266 SLC16A3O15427 465 aaKnown RBP9.91□□□□□ -0.82
PDE6A-201ENST00000255266 CALB1P05937 261 aa9.91□□□□□ -0.82
PDE6A-201ENST00000255266 PTGISQ16647 500 aa9.91□□□□□ -0.82
PDE6A-201ENST00000255266 NAPGQ99747 312 aaPredicted RBP9.91□□□□□ -0.82
PDE6A-201ENST00000255266 SENP6Q9GZR1 1112 aaPredicted RBP9.91□□□□□ -0.82
PDE6A-201ENST00000255266 RANBP17Q9H2T7 1088 aaKnown RBP9.91□□□□□ -0.82
PDE6A-201ENST00000255266 TRPV2Q9Y5S1 764 aa9.91□□□□□ -0.82
PDE6A-201ENST00000255266 SPDYE16A6NNV3 312 aaPredicted RBP9.91□□□□□ -0.82
PDE6A-201ENST00000255266 PLA2G6O60733 806 aa9.91□□□□□ -0.82
PDE6A-201ENST00000255266 MAP2K2P36507 400 aa9.91□□□□□ -0.82
PDE6A-201ENST00000255266 VAMP7P51809 220 aa9.91□□□□□ -0.82
PDE6A-201ENST00000255266 RAD51Q06609 339 aa9.91□□□□□ -0.82
PDE6A-201ENST00000255266 VGLL2Q8N8G2 317 aa9.91□□□□□ -0.82
PDE6A-201ENST00000255266 MKL1Q969V6 931 aa9.91□□□□□ -0.82
PDE6A-201ENST00000255266 CCDC68Q9H2F9 335 aa9.91□□□□□ -0.82
PDE6A-201ENST00000255266 NMRK2Q9NPI5 230 aa9.91□□□□□ -0.82
PDE6A-201ENST00000255266 CYP26B1Q9NR63 512 aa9.91□□□□□ -0.82
PDE6A-201ENST00000255266 MAN1B1Q9UKM7 699 aa9.91□□□□□ -0.82
PDE6A-201ENST00000255266 UBQLN1Q9UMX0 589 aaKnown RBP9.91□□□□□ -0.82
PDE6A-201ENST00000255266 TCRBV5S4A2TA0A5A2 114 aa9.9□□□□□ -0.82
PDE6A-201ENST00000255266 FAM117BQ6P1L5 589 aa9.9□□□□□ -0.82
PDE6A-201ENST00000255266 TRIM72Q6ZMU5 477 aa9.9□□□□□ -0.82
PDE6A-201ENST00000255266 TMEM35BQ8NCS4 154 aa9.9□□□□□ -0.82
PDE6A-201ENST00000255266 SYTL5Q8TDW5 730 aaPredicted RBP9.9□□□□□ -0.82
PDE6A-201ENST00000255266 AIFM3Q96NN9 605 aa9.9□□□□□ -0.82
PDE6A-201ENST00000255266 PCDHB8Q9UN66 801 aa9.9□□□□□ -0.82
PDE6A-201ENST00000255266 IKBKBO14920 756 aa9.9□□□□□ -0.82
PDE6A-201ENST00000255266 ARHGAP6O43182 974 aa9.9□□□□□ -0.82
PDE6A-201ENST00000255266 PPFIA4O75335 1185 aa9.9□□□□□ -0.82
PDE6A-201ENST00000255266 CLTAP09496 248 aa9.9□□□□□ -0.82
PDE6A-201ENST00000255266 GRIK1P39086 918 aa9.9□□□□□ -0.82
PDE6A-201ENST00000255266 NOLC1Q14978 699 aaKnown RBP eCLIP9.9□□□□□ -0.82
PDE6A-201ENST00000255266 NOL9Q5SY16 702 aaKnown RBP9.9□□□□□ -0.82
PDE6A-201ENST00000255266 RFX6Q8HWS3 928 aa9.9□□□□□ -0.82
PDE6A-201ENST00000255266 FAM217BQ9NTX9 383 aaPredicted RBP9.9□□□□□ -0.82
PDE6A-201ENST00000255266 FXR2P51116 673 aaKnown RBP eCLIP9.9□□□□□ -0.82
PDE6A-201ENST00000255266 CYP27A1Q02318 531 aa9.9□□□□□ -0.82
PDE6A-201ENST00000255266 PTPAQ15257 358 aa9.9□□□□□ -0.82
PDE6A-201ENST00000255266 KRT39Q6A163 491 aa9.9□□□□□ -0.82
PDE6A-201ENST00000255266 ZNF410Q86VK4 478 aa9.9□□□□□ -0.82
PDE6A-201ENST00000255266 TTC30AQ86WT1 665 aa9.9□□□□□ -0.82
PDE6A-201ENST00000255266 DDX27Q96GQ7 796 aaKnown RBP9.9□□□□□ -0.82
PDE6A-201ENST00000255266 ZCCHC17Q9NP64 241 aaKnown RBP9.9□□□□□ -0.82
PDE6A-201ENST00000255266 SETD1AO15047 1707 aaKnown RBP9.9□□□□□ -0.82
PDE6A-201ENST00000255266 ZMYM2Q9UBW7 1377 aa9.9□□□□□ -0.83
PDE6A-201ENST00000255266 TMEM143Q96AN5 459 aa9.9□□□□□ -0.83
PDE6A-201ENST00000255266 C16orf45Q96MC5 204 aaPredicted RBP9.9□□□□□ -0.83
PDE6A-201ENST00000255266 CCSER1Q9C0I3 900 aa9.9□□□□□ -0.83
PDE6A-201ENST00000255266 TSPYL1Q9H0U9 437 aa9.9□□□□□ -0.83
PDE6A-201ENST00000255266 DYRK4Q9NR20 520 aa9.9□□□□□ -0.83
PDE6A-201ENST00000255266 SEPT10Q9P0V9 454 aa9.9□□□□□ -0.83
PDE6A-201ENST00000255266 STK39Q9UEW8 545 aa9.9□□□□□ -0.83
PDE6A-201ENST00000255266 EMSYQ7Z589 1322 aa9.9□□□□□ -0.83
PDE6A-201ENST00000255266 SFI1A8K8P3 1242 aa9.89□□□□□ -0.83
PDE6A-201ENST00000255266 EIF3DO15371 548 aaKnown RBP eCLIP9.89□□□□□ -0.83
PDE6A-201ENST00000255266 TBC1D8O95759 1140 aa9.89□□□□□ -0.83
PDE6A-201ENST00000255266 CYP2C19P33261 490 aa9.89□□□□□ -0.83
PDE6A-201ENST00000255266 PGM5Q15124 567 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms