RNA–Protein interactions for RNA: ENSMUST00000005749.5

Ctr9-201, Transcript of RNA polymerase-associated protein CTR9 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctr9, Length 4,300 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9-201ENSMUST00000005749 Med7Q9CZB6 233 aa12.91□□□□□ -0.34
Ctr9-201ENSMUST00000005749 Drc3Q9D5E4 523 aa12.91□□□□□ -0.34
Ctr9-201ENSMUST00000005749 Klra10Q9R1G6 266 aa12.91□□□□□ -0.34
Ctr9-201ENSMUST00000005749 Gm8994E9PV04 411 aaKnown RBP12.91□□□□□ -0.34
Ctr9-201ENSMUST00000005749 CraddO88843 199 aa12.91□□□□□ -0.34
Ctr9-201ENSMUST00000005749 Bcat1P24288 386 aa12.91□□□□□ -0.34
Ctr9-201ENSMUST00000005749 Stmn4P63042 189 aa12.91□□□□□ -0.34
Ctr9-201ENSMUST00000005749 Cdr2P97817 455 aa12.91□□□□□ -0.34
Ctr9-201ENSMUST00000005749 Map3k9Q3U1V8 1077 aa12.91□□□□□ -0.34
Ctr9-201ENSMUST00000005749 Ice2Q3UZ18 988 aaKnown RBP12.91□□□□□ -0.34
Ctr9-201ENSMUST00000005749 Btg1-ps1Q3V0S2 161 aa12.91□□□□□ -0.34
Ctr9-201ENSMUST00000005749 Btg1-ps2Q3V0X0 161 aa12.91□□□□□ -0.34
Ctr9-201ENSMUST00000005749 Srrm1Q52KI8 946 aaKnown RBP12.91□□□□□ -0.34
Ctr9-201ENSMUST00000005749 Tubb2aQ7TMM9 445 aa12.91□□□□□ -0.34
Ctr9-201ENSMUST00000005749 Prpf31Q8CCF0 499 aaKnown RBP12.91□□□□□ -0.34
Ctr9-201ENSMUST00000005749 MafaQ8CF90 359 aa12.91□□□□□ -0.34
Ctr9-201ENSMUST00000005749 Fam49bQ921M7 324 aa12.91□□□□□ -0.34
Ctr9-201ENSMUST00000005749 Golph3Q9CRA5 298 aa12.91□□□□□ -0.34
Ctr9-201ENSMUST00000005749 Tubb2bQ9CWF2 445 aa12.91□□□□□ -0.34
Ctr9-201ENSMUST00000005749 Fam114a1Q9D281 569 aa12.91□□□□□ -0.34
Ctr9-201ENSMUST00000005749 Pacsin2Q9WVE8 486 aaKnown RBP12.91□□□□□ -0.34
Ctr9-201ENSMUST00000005749 Usp31E9Q6Y8 1344 aa12.9□□□□□ -0.34
Ctr9-201ENSMUST00000005749 Rnf19aP50636 840 aa12.9□□□□□ -0.34
Ctr9-201ENSMUST00000005749 Atp8a1P70704 1164 aa12.9□□□□□ -0.34
Ctr9-201ENSMUST00000005749 Neurl1bQ0MW30 546 aa12.9□□□□□ -0.34
Ctr9-201ENSMUST00000005749 Sh3gl1Q62419 368 aa12.9□□□□□ -0.34
Ctr9-201ENSMUST00000005749 Slc38a7Q8BWH0 463 aa12.9□□□□□ -0.34
Ctr9-201ENSMUST00000005749 RadxQ8C779 850 aa12.9□□□□□ -0.34
Ctr9-201ENSMUST00000005749 Sirt2Q8VDQ8 389 aa12.9□□□□□ -0.34
Ctr9-201ENSMUST00000005749 Tlr3Q99MB1 905 aa12.9□□□□□ -0.34
Ctr9-201ENSMUST00000005749 Krt27Q9Z320 448 aa12.9□□□□□ -0.34
Ctr9-201ENSMUST00000005749 Slit2Q9R1B9 1521 aa12.9□□□□□ -0.34
Ctr9-201ENSMUST00000005749 Myo1eE9Q634 1107 aa12.9□□□□□ -0.34
Ctr9-201ENSMUST00000005749 Efna5O08543 228 aa12.9□□□□□ -0.34
Ctr9-201ENSMUST00000005749 PgfP49764 158 aa12.9□□□□□ -0.34
Ctr9-201ENSMUST00000005749 YwhagP61982 247 aaKnown RBP12.9□□□□□ -0.34
Ctr9-201ENSMUST00000005749 Gm10488Q4KL05 212 aa12.9□□□□□ -0.34
Ctr9-201ENSMUST00000005749 Krt12Q64291 487 aa12.9□□□□□ -0.34
Ctr9-201ENSMUST00000005749 Cplx4Q80WM3 160 aa12.9□□□□□ -0.34
Ctr9-201ENSMUST00000005749 Gga3Q8BMI3 718 aa12.9□□□□□ -0.34
Ctr9-201ENSMUST00000005749 Rassf9Q8K342 435 aa12.9□□□□□ -0.34
Ctr9-201ENSMUST00000005749 Ssx2ipQ8VC66 615 aa12.9□□□□□ -0.34
Ctr9-201ENSMUST00000005749 Rab3il1Q8VDV3 383 aa12.9□□□□□ -0.34
Ctr9-201ENSMUST00000005749 Maged2Q9ER67 616 aa12.9□□□□□ -0.34
Ctr9-201ENSMUST00000005749 Trp53inp1Q9QXE4 239 aa12.9□□□□□ -0.34
Ctr9-201ENSMUST00000005749 Aldh18a1Q9Z110 795 aa12.9□□□□□ -0.34
Ctr9-201ENSMUST00000005749 Efcab12V9GXH0 673 aa12.9□□□□□ -0.34
Ctr9-201ENSMUST00000005749 Zc3h4Q6ZPZ3 1304 aaKnown RBP12.9□□□□□ -0.34
Ctr9-201ENSMUST00000005749 Magea8O89012 320 aa12.9□□□□□ -0.34
Ctr9-201ENSMUST00000005749 Atf2P16951 487 aaKnown RBP12.9□□□□□ -0.34
Ctr9-201ENSMUST00000005749 Eef1dP57776 281 aaKnown RBP12.9□□□□□ -0.34
Ctr9-201ENSMUST00000005749 FerP70451 823 aa12.9□□□□□ -0.34
Ctr9-201ENSMUST00000005749 Ccz1Q8C1Y8 480 aa12.9□□□□□ -0.34
Ctr9-201ENSMUST00000005749 Ifi205aQ8CGE8 404 aa12.9□□□□□ -0.34
Ctr9-201ENSMUST00000005749 Msantd4Q91YU3 345 aa12.9□□□□□ -0.34
Ctr9-201ENSMUST00000005749 Dbndd2Q9CRD4 158 aa12.9□□□□□ -0.34
Ctr9-201ENSMUST00000005749 Tlr2Q9QUN7 784 aa12.9□□□□□ -0.34
Ctr9-201ENSMUST00000005749 Rps6ka2Q9WUT3 733 aa12.9□□□□□ -0.34
Ctr9-201ENSMUST00000005749 Rabgap1A2AWA9 1064 aa12.89□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Cops5O35864 334 aa12.89□□□□□ -0.35
Ctr9-201ENSMUST00000005749 CstaP56567 97 aa12.89□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Arl4aP61213 200 aa12.89□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Psmc1P62192 440 aa12.89□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Zhx1P70121 873 aa12.89□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Fgfr4Q03142 799 aa12.89□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Frmd8Q3UFK8 466 aa12.89□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Retreg2Q6NS82 541 aa12.89□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Dnph1Q80VJ3 173 aa12.89□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Sh2b1Q91ZM2 756 aa12.89□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Gps1Q99LD4 471 aaKnown RBP12.89□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Nudt12Q9DCN1 462 aa12.89□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Krt36B1AQ75 473 aa12.89□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Usp17ldG5E8G2 545 aa12.89□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Usp17lcG5E8I7 545 aa12.89□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Serpina1aP07758 413 aa12.89□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Serpina1bP22599 413 aa12.89□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Serpina1cQ00896 412 aa12.89□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Serpina1dQ00897 413 aa12.89□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Gbp1Q01514 589 aa12.89□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Spink5Q148R4 1017 aa12.89□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Brip1Q5SXJ3 1174 aa12.89□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Q6PD19 689 aa12.89□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Calhm6Q8C9E8 313 aa12.89□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Golga1Q9CW79 758 aa12.89□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Zcchc8Q9CYA6 709 aaKnown RBP12.89□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Fmnl1Q9JL26 1094 aa12.89□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Gm3095E9Q058 166 aa12.89□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Aknad1E9Q8N6 675 aa12.89□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Trim55G3X8Y1 545 aa12.89□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Ccr1P51675 355 aa12.89□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Sycp3P70281 254 aa12.89□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Sox13Q04891 613 aa12.89□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Ppm1kQ8BXN7 372 aa12.89□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Map1sQ8C052 973 aa12.89□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Rab44Q8CB87 725 aa12.89□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Fam20aQ8CID3 541 aa12.89□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Lrrc63A6H694 637 aa12.89□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Ccdc152E9PX14 254 aa12.89□□□□□ -0.35
Ctr9-201ENSMUST00000005749 MafgO54790 162 aa12.89□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Gnrh1P13562 90 aa12.89□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 22.5 ms