RNA–Protein interactions for RNA: YPL003W

ULA1, Transcript of Protein that activates Rub1p (NEDD8) before neddylation, yeast

Gene ULA1, Length 1,389 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ULA1	YPL003W	YIL067C	P40514	678 aa		4.85	□□□□□ -1.63
ULA1	YPL003W	LEM3	P42838	414 aa		4.85	□□□□□ -1.63
ULA1	YPL003W	PPT1	P53043	513 aa		4.85	□□□□□ -1.63
ULA1	YPL003W	YGL235W	P53071	178 aa		4.85	□□□□□ -1.63
ULA1	YPL003W	YNR040W	P53736	256 aa		4.85	□□□□□ -1.63
ULA1	YPL003W	NCE101	Q02820	53 aa		4.85	□□□□□ -1.63
ULA1	YPL003W	INP1	Q03694	420 aa		4.85	□□□□□ -1.63
ULA1	YPL003W	OST6	Q03723	332 aa		4.85	□□□□□ -1.63
ULA1	YPL003W	YMR087W	Q04299	284 aa		4.85	□□□□□ -1.63
ULA1	YPL003W	MGR3	Q04472	501 aa		4.85	□□□□□ -1.63
ULA1	YPL003W	ERB1	Q04660	807 aa	Known RBP	4.85	□□□□□ -1.63
ULA1	YPL003W	ELP6	Q04868	273 aa		4.85	□□□□□ -1.63
ULA1	YPL003W	SNT309	Q06091	175 aa	Predicted RBP	4.85	□□□□□ -1.63
ULA1	YPL003W	MLC2	Q06580	163 aa		4.85	□□□□□ -1.63
ULA1	YPL003W	MDM36	Q06820	579 aa		4.85	□□□□□ -1.63
ULA1	YPL003W	GUP2	Q08929	609 aa		4.85	□□□□□ -1.63
ULA1	YPL003W	SPC3	Q12133	184 aa		4.85	□□□□□ -1.63
ULA1	YPL003W	PCL9	Q12477	304 aa		4.85	□□□□□ -1.63
ULA1	YPL003W	FAS1	P07149	2051 aa	Known RBP	4.84	□□□□□ -1.63
ULA1	YPL003W	CDC26	P14724	124 aa		4.84	□□□□□ -1.63
ULA1	YPL003W	GLK1	P17709	500 aa	Known RBP	4.84	□□□□□ -1.63
ULA1	YPL003W	PHO80	P20052	293 aa		4.84	□□□□□ -1.63
ULA1	YPL003W	PRP28	P23394	588 aa		4.84	□□□□□ -1.63
ULA1	YPL003W	NAR1	P23503	491 aa	Known RBP	4.84	□□□□□ -1.63
ULA1	YPL003W	GIT1	P25346	518 aa		4.84	□□□□□ -1.63
ULA1	YPL003W	FAA1	P30624	700 aa	Known RBP	4.84	□□□□□ -1.63
ULA1	YPL003W	LST4	P34239	828 aa		4.84	□□□□□ -1.63
ULA1	YPL003W	YBR139W	P38109	508 aa		4.84	□□□□□ -1.63
ULA1	YPL003W	ALG3	P38179	458 aa		4.84	□□□□□ -1.63
ULA1	YPL003W	CHL4	P38907	458 aa		4.84	□□□□□ -1.63
ULA1	YPL003W	SPG5	P42933	373 aa		4.84	□□□□□ -1.63
ULA1	YPL003W	IRC7	P43623	340 aa		4.84	□□□□□ -1.63
ULA1	YPL003W	YJR141W	P47172	347 aa	Predicted RBP	4.84	□□□□□ -1.63
ULA1	YPL003W	LSG1	P53145	640 aa	Known RBP	4.84	□□□□□ -1.63
ULA1	YPL003W	YGR067C	P53243	804 aa		4.84	□□□□□ -1.63
ULA1	YPL003W	YLR460C	P54007	376 aa		4.84	□□□□□ -1.63
ULA1	YPL003W	CIK1	Q01649	594 aa		4.84	□□□□□ -1.63
ULA1	YPL003W	YMR210W	Q03649	449 aa		4.84	□□□□□ -1.63
ULA1	YPL003W	SPC19	Q03954	165 aa		4.84	□□□□□ -1.63
ULA1	YPL003W	YPR127W	Q06494	345 aa		4.84	□□□□□ -1.63
ULA1	YPL003W	SOG2	Q08817	791 aa		4.84	□□□□□ -1.63
ULA1	YPL003W	MED2	Q12124	431 aa		4.84	□□□□□ -1.63
ULA1	YPL003W	PAR32	Q12515	295 aa	Known RBP	4.84	□□□□□ -1.63
ULA1	YPL003W	DCP1	Q12517	231 aa	Predicted RBP	4.84	□□□□□ -1.63
ULA1	YPL003W	DFG16	Q99234	619 aa		4.84	□□□□□ -1.63
ULA1	YPL003W	YSF3	P0C074	85 aa	Predicted RBP	4.83	□□□□□ -1.64
ULA1	YPL003W	SEC12	P11655	471 aa		4.83	□□□□□ -1.64
ULA1	YPL003W	SAC7	P17121	654 aa		4.83	□□□□□ -1.64
ULA1	YPL003W	ERD2	P18414	219 aa		4.83	□□□□□ -1.64
ULA1	YPL003W	KGD1	P20967	1014 aa	Known RBP	4.83	□□□□□ -1.64
ULA1	YPL003W	RPL24B	P24000	155 aa	Known RBP	4.83	□□□□□ -1.64
ULA1	YPL003W	PMT2	P31382	759 aa		4.83	□□□□□ -1.64
ULA1	YPL003W	NDC1	P32500	655 aa		4.83	□□□□□ -1.64
ULA1	YPL003W	GPX1	P36014	167 aa		4.83	□□□□□ -1.64
ULA1	YPL003W	JEN1	P36035	616 aa		4.83	□□□□□ -1.64
ULA1	YPL003W	MCM7	P38132	845 aa		4.83	□□□□□ -1.64
ULA1	YPL003W	AMN1	P38285	549 aa	Predicted RBP	4.83	□□□□□ -1.64
ULA1	YPL003W	NVJ1	P38881	321 aa		4.83	□□□□□ -1.64
ULA1	YPL003W	YNL195C	P40168	261 aa		4.83	□□□□□ -1.64
ULA1	YPL003W	MDV1	P47025	714 aa		4.83	□□□□□ -1.64
ULA1	YPL003W	SEH1	P53011	349 aa	Known RBP	4.83	□□□□□ -1.64
ULA1	YPL003W	MAK3	Q03503	176 aa		4.83	□□□□□ -1.64
ULA1	YPL003W	PLM2	Q04383	521 aa		4.83	□□□□□ -1.64
ULA1	YPL003W	YMR315W	Q04869	349 aa	Known RBP	4.83	□□□□□ -1.64
ULA1	YPL003W	SNO4	Q04902	237 aa		4.83	□□□□□ -1.64
ULA1	YPL003W	HSP33	Q08914	237 aa	Known RBP	4.83	□□□□□ -1.64
ULA1	YPL003W	FMP40	Q08968	688 aa	Predicted RBP	4.83	□□□□□ -1.64
ULA1	YPL003W	HSP32	Q08992	237 aa		4.83	□□□□□ -1.64
ULA1	YPL003W	YOR289W	Q12012	251 aa	Predicted RBP	4.83	□□□□□ -1.64
ULA1	YPL003W	YDL177C	Q12257	170 aa		4.83	□□□□□ -1.64
ULA1	YPL003W	YOS9	Q99220	542 aa		4.83	□□□□□ -1.64
ULA1	YPL003W	MET2	P08465	486 aa		4.82	□□□□□ -1.64
ULA1	YPL003W	YGL041W-A	P0C5N3	154 aa		4.82	□□□□□ -1.64
ULA1	YPL003W	ERD1	P16151	362 aa		4.82	□□□□□ -1.64
ULA1	YPL003W	STP22	P25604	385 aa		4.82	□□□□□ -1.64
ULA1	YPL003W	CWH43	P25618	953 aa		4.82	□□□□□ -1.64
ULA1	YPL003W	TIM12	P32830	109 aa		4.82	□□□□□ -1.64
ULA1	YPL003W	RPS0A	P32905	252 aa	Known RBP	4.82	□□□□□ -1.64
ULA1	YPL003W	MDL1	P33310	695 aa		4.82	□□□□□ -1.64
ULA1	YPL003W	HIS7	P33734	552 aa	Known RBP	4.82	□□□□□ -1.64
ULA1	YPL003W	MRPL16	P38064	232 aa		4.82	□□□□□ -1.64
ULA1	YPL003W	YBR063C	P38083	404 aa		4.82	□□□□□ -1.64
ULA1	YPL003W	SHE1	P38200	338 aa		4.82	□□□□□ -1.64
ULA1	YPL003W	RTC2	P38279	296 aa		4.82	□□□□□ -1.64
ULA1	YPL003W	RRP4	P38792	359 aa	Known RBP	4.82	□□□□□ -1.64
ULA1	YPL003W	NSG1	P38837	291 aa		4.82	□□□□□ -1.64
ULA1	YPL003W	SKN7	P38889	622 aa		4.82	□□□□□ -1.64
ULA1	YPL003W	YHR210C	P38893	341 aa		4.82	□□□□□ -1.64
ULA1	YPL003W	PCL6	P40038	420 aa		4.82	□□□□□ -1.64
ULA1	YPL003W	SHR5	P41912	237 aa		4.82	□□□□□ -1.64
ULA1	YPL003W	STB1	P42845	420 aa		4.82	□□□□□ -1.64
ULA1	YPL003W	QRI7	P43122	407 aa		4.82	□□□□□ -1.64
ULA1	YPL003W	DUG1	P43616	481 aa	Known RBP	4.82	□□□□□ -1.64
ULA1	YPL003W	RCF1	Q03713	159 aa		4.82	□□□□□ -1.64
ULA1	YPL003W	GPI17	Q04080	534 aa		4.82	□□□□□ -1.64
ULA1	YPL003W	YPS7	Q06325	596 aa		4.82	□□□□□ -1.64
ULA1	YPL003W	CDA2	Q06703	312 aa		4.82	□□□□□ -1.64
ULA1	YPL003W	THP3	Q12049	470 aa	Known RBP	4.82	□□□□□ -1.64
ULA1	YPL003W	YDL109C	Q12103	647 aa		4.82	□□□□□ -1.64
ULA1	YPL003W	NPC2	Q12408	173 aa		4.82	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 18 ms