RNA–Protein interactions for RNA: YOR276W

CAF20, Transcript of Phosphoprotein of the mRNA cap-binding complex, yeast

Gene CAF20, Length 486 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CAF20	YOR276W	BNS1	P50084	137 aa		3.17	□□□□□ -1.9
CAF20	YOR276W	CLD1	P53264	445 aa		3.17	□□□□□ -1.9
CAF20	YOR276W	CRH1	P53301	507 aa		3.17	□□□□□ -1.9
CAF20	YOR276W	CWC22	P53333	577 aa	Known RBP	3.17	□□□□□ -1.9
CAF20	YOR276W	SED5	Q01590	340 aa		3.17	□□□□□ -1.9
CAF20	YOR276W	APC9	Q12107	265 aa		3.17	□□□□□ -1.9
CAF20	YOR276W	HMS1	Q12398	434 aa		3.17	□□□□□ -1.9
CAF20	YOR276W	SSK22	P25390	1331 aa	Predicted RBP	3.17	□□□□□ -1.9
CAF20	YOR276W	RPL24A	P04449	155 aa	Known RBP	3.16	□□□□□ -1.9
CAF20	YOR276W	RSR1	P13856	272 aa		3.16	□□□□□ -1.9
CAF20	YOR276W	FRS2	P15625	503 aa	Known RBP	3.16	□□□□□ -1.9
CAF20	YOR276W	YSR3	P23501	404 aa		3.16	□□□□□ -1.9
CAF20	YOR276W	MIR1	P23641	311 aa	Known RBP	3.16	□□□□□ -1.9
CAF20	YOR276W	RVS161	P25343	265 aa	Known RBP	3.16	□□□□□ -1.9
CAF20	YOR276W	ATG18	P43601	500 aa		3.16	□□□□□ -1.9
CAF20	YOR276W	SUR7	P54003	302 aa		3.16	□□□□□ -1.9
CAF20	YOR276W	BER1	Q06688	274 aa	Known RBP	3.16	□□□□□ -1.9
CAF20	YOR276W	ATP16	Q12165	160 aa		3.16	□□□□□ -1.9
CAF20	YOR276W	MCT1	Q12283	360 aa		3.16	□□□□□ -1.9
CAF20	YOR276W	JID1	Q12350	301 aa		3.16	□□□□□ -1.9
CAF20	YOR276W	NAG1	Q8TGN9	163 aa		3.16	□□□□□ -1.9
CAF20	YOR276W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	3.15	□□□□□ -1.91	not detected
CAF20	YOR276W	REP1	P03871	373 aa		3.15	□□□□□ -1.91
CAF20	YOR276W	RPB5	P20434	215 aa		3.15	□□□□□ -1.91
CAF20	YOR276W	IMP3	P32899	183 aa	Predicted RBP	3.15	□□□□□ -1.91
CAF20	YOR276W	COY1	P34237	679 aa		3.15	□□□□□ -1.91
CAF20	YOR276W	ANR2	P36090	516 aa	Predicted RBP	3.15	□□□□□ -1.91
CAF20	YOR276W	YHR035W	P38769	630 aa		3.15	□□□□□ -1.91
CAF20	YOR276W	SPT8	P38915	602 aa		3.15	□□□□□ -1.91
CAF20	YOR276W	PET100	P38958	111 aa		3.15	□□□□□ -1.91
CAF20	YOR276W	REE1	P40893	198 aa		3.15	□□□□□ -1.91
CAF20	YOR276W	AGP3	P43548	558 aa		3.15	□□□□□ -1.91
CAF20	YOR276W	AIM23	P47015	356 aa		3.15	□□□□□ -1.91
CAF20	YOR276W	YNL134C	P53912	376 aa	Known RBP	3.15	□□□□□ -1.91
CAF20	YOR276W	YMR027W	Q04371	470 aa		3.15	□□□□□ -1.91
CAF20	YOR276W	COX20	Q04935	205 aa		3.15	□□□□□ -1.91
CAF20	YOR276W	FSH2	Q05015	223 aa		3.15	□□□□□ -1.91
CAF20	YOR276W	GAS2	Q06135	555 aa		3.15	□□□□□ -1.91
CAF20	YOR276W	CMS1	Q07897	291 aa	Known RBP	3.15	□□□□□ -1.91
CAF20	YOR276W	IRC25	Q07951	179 aa		3.15	□□□□□ -1.91
CAF20	YOR276W	FDH1	Q08911	376 aa		3.15	□□□□□ -1.91
CAF20	YOR276W	TAF10	Q12030	206 aa		3.15	□□□□□ -1.91
CAF20	YOR276W	ARO2	P28777	376 aa	Known RBP	3.14	□□□□□ -1.91
CAF20	YOR276W	SKG6	P32900	734 aa	Predicted RBP	3.14	□□□□□ -1.91
CAF20	YOR276W	COS9	P36034	407 aa		3.14	□□□□□ -1.91
CAF20	YOR276W	MRPL10	P36520	322 aa		3.14	□□□□□ -1.91
CAF20	YOR276W	PEX22	P39718	180 aa		3.14	□□□□□ -1.91
CAF20	YOR276W	MOB2	P43563	287 aa		3.14	□□□□□ -1.91
CAF20	YOR276W	MRX5	P47007	382 aa		3.14	□□□□□ -1.91
CAF20	YOR276W	BOR1	P53838	576 aa		3.14	□□□□□ -1.91
CAF20	YOR276W	SNX41	Q04053	625 aa		3.14	□□□□□ -1.91
CAF20	YOR276W	YLR173W	Q06247	608 aa		3.14	□□□□□ -1.91
CAF20	YOR276W	ASR1	Q06834	288 aa		3.14	□□□□□ -1.91
CAF20	YOR276W	YLR012C	Q07927	99 aa		3.14	□□□□□ -1.91
CAF20	YOR276W	RDL2	Q08742	149 aa	Known RBP	3.14	□□□□□ -1.91
CAF20	YOR276W	POM33	Q12164	279 aa		3.14	□□□□□ -1.91
CAF20	YOR276W	CTA1	P15202	515 aa		3.13	□□□□□ -1.91
CAF20	YOR276W	NOP1	P15646	327 aa	Known RBP	3.13	□□□□□ -1.91
CAF20	YOR276W	ERD1	P16151	362 aa		3.13	□□□□□ -1.91
CAF20	YOR276W	GCG1	P32656	232 aa	Known RBP	3.13	□□□□□ -1.91
CAF20	YOR276W	LSM12	P38828	187 aa	Known RBP	3.13	□□□□□ -1.91
CAF20	YOR276W	TDA11	P38854	504 aa		3.13	□□□□□ -1.91
CAF20	YOR276W	PFS1	P38872	237 aa		3.13	□□□□□ -1.91
CAF20	YOR276W	OXA1	P39952	402 aa		3.13	□□□□□ -1.91
CAF20	YOR276W	AIM10	P39965	576 aa	Known RBP	3.13	□□□□□ -1.91
CAF20	YOR276W	PMT4	P46971	762 aa		3.13	□□□□□ -1.91
CAF20	YOR276W	LIA1	P47120	325 aa	Known RBP	3.13	□□□□□ -1.91
CAF20	YOR276W	BIO3	P50277	480 aa		3.13	□□□□□ -1.91
CAF20	YOR276W	VAC7	P53950	1165 aa		3.13	□□□□□ -1.91
CAF20	YOR276W	GRX3	Q03835	250 aa		3.13	□□□□□ -1.91
CAF20	YOR276W	CTS2	Q06350	511 aa		3.13	□□□□□ -1.91
CAF20	YOR276W	BTS1	Q12051	335 aa		3.13	□□□□□ -1.91
CAF20	YOR276W	UTP23	Q12339	254 aa	Known RBP	3.13	□□□□□ -1.91
CAF20	YOR276W	IZH4	Q99393	312 aa		3.13	□□□□□ -1.91
CAF20	YOR276W	ATP6	P00854	259 aa		3.12	□□□□□ -1.91
CAF20	YOR276W	RPL31A	P0C2H8	113 aa	Known RBP	3.12	□□□□□ -1.91
CAF20	YOR276W	POL30	P15873	258 aa	Known RBP	3.12	□□□□□ -1.91
CAF20	YOR276W	GIT1	P25346	518 aa		3.12	□□□□□ -1.91
CAF20	YOR276W	CPR3	P25719	182 aa		3.12	□□□□□ -1.91
CAF20	YOR276W	RPL16B	P26785	198 aa	Known RBP	3.12	□□□□□ -1.91
CAF20	YOR276W	LDS1	P31379	325 aa		3.12	□□□□□ -1.91
CAF20	YOR276W	NUP2	P32499	720 aa		3.12	□□□□□ -1.91
CAF20	YOR276W	KTI12	P34253	313 aa	Known RBP	3.12	□□□□□ -1.91
CAF20	YOR276W	YKL063C	P35725	167 aa		3.12	□□□□□ -1.91
CAF20	YOR276W	YPC1	P38298	316 aa		3.12	□□□□□ -1.91
CAF20	YOR276W	WSC4	P38739	605 aa		3.12	□□□□□ -1.91
CAF20	YOR276W	YHR045W	P38775	560 aa		3.12	□□□□□ -1.91
CAF20	YOR276W	BAT1	P38891	393 aa	Known RBP	3.12	□□□□□ -1.91
CAF20	YOR276W	YER186C	P40101	306 aa		3.12	□□□□□ -1.91
CAF20	YOR276W	SHQ1	P40486	507 aa	Predicted RBP	3.12	□□□□□ -1.91
CAF20	YOR276W	BNA6	P43619	295 aa		3.12	□□□□□ -1.91
CAF20	YOR276W	CDH1	P53197	566 aa		3.12	□□□□□ -1.91
CAF20	YOR276W	PRP38	Q00723	242 aa	Predicted RBP	3.12	□□□□□ -1.91
CAF20	YOR276W	SLT2	Q00772	484 aa		3.12	□□□□□ -1.91
CAF20	YOR276W	GMC2	Q06201	188 aa		3.12	□□□□□ -1.91
CAF20	YOR276W	ARV1	Q06541	321 aa		3.12	□□□□□ -1.91
CAF20	YOR276W	SFM1	Q12314	213 aa		3.12	□□□□□ -1.91
CAF20	YOR276W	ADH2	P00331	348 aa	Known RBP	3.11	□□□□□ -1.91
CAF20	YOR276W	ILV1	P00927	576 aa	Known RBP	3.11	□□□□□ -1.91
CAF20	YOR276W	CDC42	P19073	191 aa		3.11	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 36.5 ms