RNA–Protein interactions for RNA: YOR227W

HER1, Transcript of Protein of unknown function, yeastyeast

Gene HER1, Length 3,741 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HER1YOR227W BTT1P40314 149 aaPredicted RBP1.79□□□□□ -2.12
HER1YOR227W SCD6P45978 349 aaKnown RBP RIP-Chip data1.79□□□□□ -2.12not detected
HER1YOR227W IMD3P50095 523 aaKnown RBP1.79□□□□□ -2.12
HER1YOR227W YDC1Q02896 317 aa1.79□□□□□ -2.12
HER1YOR227W SEC13Q04491 297 aaKnown RBP1.79□□□□□ -2.12
HER1YOR227W SNF8Q12483 233 aa1.79□□□□□ -2.12
HER1YOR227W SEY1Q99287 776 aa1.79□□□□□ -2.12
HER1YOR227W RPL40AP0CH08 128 aaKnown RBP1.78□□□□□ -2.12
HER1YOR227W RPL40BP0CH09 128 aaKnown RBP1.78□□□□□ -2.12
HER1YOR227W RFA3P26755 122 aaKnown RBP1.78□□□□□ -2.12
HER1YOR227W ATP7P30902 174 aa1.78□□□□□ -2.12
HER1YOR227W TSA1P34760 196 aaKnown RBP1.78□□□□□ -2.12
HER1YOR227W DTR1P38125 572 aa1.78□□□□□ -2.12
HER1YOR227W IST2P38250 946 aa1.78□□□□□ -2.12
HER1YOR227W HIS2P38635 335 aa1.78□□□□□ -2.12
HER1YOR227W EGD2P38879 174 aaKnown RBP1.78□□□□□ -2.12
HER1YOR227W EXO1P39875 702 aa1.78□□□□□ -2.12
HER1YOR227W FMP52P40008 231 aa1.78□□□□□ -2.12
HER1YOR227W NIF3P53081 288 aa1.78□□□□□ -2.12
HER1YOR227W YIP3P53633 176 aa1.78□□□□□ -2.12
HER1YOR227W MPS1P54199 764 aa1.78□□□□□ -2.12
HER1YOR227W PRP38Q00723 242 aaPredicted RBP1.78□□□□□ -2.12
HER1YOR227W PIR3Q03180 325 aa1.78□□□□□ -2.12
HER1YOR227W GCN5Q03330 439 aa1.78□□□□□ -2.12
HER1YOR227W TRS23Q03784 219 aa1.78□□□□□ -2.12
HER1YOR227W SMP3Q04174 516 aa1.78□□□□□ -2.12
HER1YOR227W VBA1Q04301 562 aa1.78□□□□□ -2.12
HER1YOR227W ARO10Q06408 635 aa1.78□□□□□ -2.12
HER1YOR227W YOR338WQ99326 363 aa1.78□□□□□ -2.12
HER1YOR227W MDN1Q12019 4910 aaKnown RBP1.78□□□□□ -2.12
HER1YOR227W YBR056W-AI2HB52 66 aa1.78□□□□□ -2.12
HER1YOR227W BI2P03873 423 aa1.78□□□□□ -2.12
HER1YOR227W ASP3-2P0CX77 362 aa1.78□□□□□ -2.12
HER1YOR227W ASP3-3P0CX78 362 aa1.78□□□□□ -2.12
HER1YOR227W ASP3-4P0CX79 362 aa1.78□□□□□ -2.12
HER1YOR227W ASP3-1P0CZ17 362 aa1.78□□□□□ -2.12
HER1YOR227W BAR1P12630 587 aa1.78□□□□□ -2.12
HER1YOR227W CYS4P32582 507 aaKnown RBP1.78□□□□□ -2.12
HER1YOR227W MAL32P38158 584 aa1.78□□□□□ -2.12
HER1YOR227W ALG8P40351 577 aa1.78□□□□□ -2.12
HER1YOR227W PTR3P43606 678 aa1.78□□□□□ -2.12
HER1YOR227W RTT101P47050 842 aa1.78□□□□□ -2.12
HER1YOR227W MIG2P53035 382 aa1.78□□□□□ -2.12
HER1YOR227W GND2P53319 492 aa1.78□□□□□ -2.12
HER1YOR227W MAL12P53341 584 aa1.78□□□□□ -2.12
HER1YOR227W MRP51Q02950 344 aa1.78□□□□□ -2.12
HER1YOR227W MSS11Q03825 758 aa1.78□□□□□ -2.12
HER1YOR227W YMR166CQ03829 368 aa1.78□□□□□ -2.12
HER1YOR227W ARP10Q04549 284 aa1.78□□□□□ -2.12
HER1YOR227W ORT1Q12375 292 aa1.78□□□□□ -2.12
HER1YOR227W BI3Q9ZZW7 517 aa1.78□□□□□ -2.12
HER1YOR227W TYR1P20049 452 aa1.78□□□□□ -2.13
HER1YOR227W MEI4P29467 408 aa1.78□□□□□ -2.13
HER1YOR227W DEP1P31385 405 aa1.78□□□□□ -2.13
HER1YOR227W YKL063CP35725 167 aa1.78□□□□□ -2.13
HER1YOR227W MIC12P38341 106 aa1.78□□□□□ -2.13
HER1YOR227W SMB1P40018 196 aaKnown RBP1.78□□□□□ -2.13
HER1YOR227W ENB1Q08299 606 aa1.78□□□□□ -2.13
HER1YOR227W BTS1Q12051 335 aa1.78□□□□□ -2.13
HER1YOR227W YLR108CQ12259 485 aa1.78□□□□□ -2.13
HER1YOR227W DET1Q99288 334 aaKnown RBP1.78□□□□□ -2.13
HER1YOR227W NAM2P11325 894 aa1.77□□□□□ -2.13
HER1YOR227W SPO12P17123 173 aa1.77□□□□□ -2.13
HER1YOR227W KIN3P22209 435 aa1.77□□□□□ -2.13
HER1YOR227W CSM1P25651 190 aa1.77□□□□□ -2.13
HER1YOR227W VMA6P32366 345 aaKnown RBP1.77□□□□□ -2.13
HER1YOR227W SAC1P32368 623 aaKnown RBP1.77□□□□□ -2.13
HER1YOR227W MRPL6P32904 214 aa1.77□□□□□ -2.13
HER1YOR227W CHK1P38147 527 aa1.77□□□□□ -2.13
HER1YOR227W YBR096WP38256 230 aa1.77□□□□□ -2.13
HER1YOR227W DBP8P38719 431 aa1.77□□□□□ -2.13
HER1YOR227W FRT2P39734 528 aa1.77□□□□□ -2.13
HER1YOR227W FAU1P40099 211 aa1.77□□□□□ -2.13
HER1YOR227W RFC4P40339 323 aaKnown RBP1.77□□□□□ -2.13
HER1YOR227W YKE4P40544 346 aa1.77□□□□□ -2.13
HER1YOR227W AGP3P43548 558 aa1.77□□□□□ -2.13
HER1YOR227W YNL040WP53960 456 aaPredicted RBP1.77□□□□□ -2.13
HER1YOR227W CTF19Q02732 369 aa1.77□□□□□ -2.13
HER1YOR227W YDR387CQ04162 555 aa1.77□□□□□ -2.13
HER1YOR227W TDA6Q06466 467 aa1.77□□□□□ -2.13
HER1YOR227W GAT3Q07928 141 aa1.77□□□□□ -2.13
HER1YOR227W LDS2Q08218 356 aa1.77□□□□□ -2.13
HER1YOR227W YOR387CQ08910 206 aa1.77□□□□□ -2.13
HER1YOR227W ATG34Q12292 412 aa1.77□□□□□ -2.13
HER1YOR227W TRP3P00937 484 aa1.77□□□□□ -2.13
HER1YOR227W GAL4P04386 881 aa1.77□□□□□ -2.13
HER1YOR227W MTF1P14908 341 aaKnown RBP1.77□□□□□ -2.13
HER1YOR227W PPA2P28239 310 aa1.77□□□□□ -2.13
HER1YOR227W SKN1P33336 771 aa1.77□□□□□ -2.13
HER1YOR227W DHH1P39517 506 aaKnown RBP1.77□□□□□ -2.13
HER1YOR227W YNL194CP40169 301 aa1.77□□□□□ -2.13
HER1YOR227W RHO4Q00246 291 aa1.77□□□□□ -2.13
HER1YOR227W BNA7Q04066 261 aa1.77□□□□□ -2.13
HER1YOR227W FAR8Q05040 523 aa1.77□□□□□ -2.13
HER1YOR227W BNA5Q05979 453 aa1.77□□□□□ -2.13
HER1YOR227W MCA1Q08601 432 aa1.77□□□□□ -2.13
HER1YOR227W BRR1Q99177 341 aaPredicted RBP1.77□□□□□ -2.13
HER1YOR227W YPL229WQ99395 206 aa1.77□□□□□ -2.13
HER1YOR227W HEM2P05373 342 aa1.77□□□□□ -2.13
HER1YOR227W RAD7P06779 565 aa1.77□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 10.6 ms