RNA–Protein interactions for RNA: YOR129C

AFI1, Transcript of Arf3p polarization-specific docking factor, yeastyeast

Gene AFI1, Length 2,682 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFI1YOR129C SKT5P34226 696 aa2.09□□□□□ -2.07
AFI1YOR129C PRS4P38063 326 aaPredicted RBP2.09□□□□□ -2.07
AFI1YOR129C HEK2P38199 381 aaKnown RBP RIP-Chip data2.09□□□□□ -2.07not detected
AFI1YOR129C VHC1P38329 1120 aa2.09□□□□□ -2.07
AFI1YOR129C ERG28P40030 148 aa2.09□□□□□ -2.07
AFI1YOR129C VHS2P40463 436 aa2.09□□□□□ -2.07
AFI1YOR129C YGR201CP42936 225 aa2.09□□□□□ -2.07
AFI1YOR129C FMP33P46998 180 aa2.09□□□□□ -2.07
AFI1YOR129C VPS25P47142 202 aa2.09□□□□□ -2.07
AFI1YOR129C NQM1P53228 333 aaPredicted RBP2.09□□□□□ -2.07
AFI1YOR129C TRM112P53738 135 aaPredicted RBP2.09□□□□□ -2.07
AFI1YOR129C YNL140CP53910 189 aa2.09□□□□□ -2.07
AFI1YOR129C ALG11P53954 548 aaKnown RBP2.09□□□□□ -2.07
AFI1YOR129C RHO4Q00246 291 aa2.09□□□□□ -2.07
AFI1YOR129C CWC27Q02770 301 aa2.09□□□□□ -2.07
AFI1YOR129C PLP1Q04004 230 aa2.09□□□□□ -2.07
AFI1YOR129C CSM3Q04659 317 aa2.09□□□□□ -2.07
AFI1YOR129C ADH6Q04894 360 aaKnown RBP2.09□□□□□ -2.07
AFI1YOR129C DIC1Q06143 298 aa2.09□□□□□ -2.07
AFI1YOR129C RKM5Q12367 367 aa2.09□□□□□ -2.07
AFI1YOR129C AGC1Q12482 902 aa2.09□□□□□ -2.07
AFI1YOR129C UBA3Q99344 299 aa2.09□□□□□ -2.07
AFI1YOR129C STH1P32597 1359 aa2.09□□□□□ -2.07
AFI1YOR129C COX3P00420 269 aa2.09□□□□□ -2.08
AFI1YOR129C ILV6P25605 309 aaKnown RBP2.09□□□□□ -2.08
AFI1YOR129C NDC1P32500 655 aa2.09□□□□□ -2.08
AFI1YOR129C FRE1P32791 686 aa2.09□□□□□ -2.08
AFI1YOR129C CLG1P35190 452 aa2.09□□□□□ -2.08
AFI1YOR129C UPS2P35200 230 aa2.09□□□□□ -2.08
AFI1YOR129C SHE3P38272 425 aaKnown RBP2.09□□□□□ -2.08
AFI1YOR129C MIC12P38341 106 aa2.09□□□□□ -2.08
AFI1YOR129C LAG1P38703 411 aa2.09□□□□□ -2.08
AFI1YOR129C FLO5P38894 1075 aa2.09□□□□□ -2.08
AFI1YOR129C YAT2P40017 923 aa2.09□□□□□ -2.08
AFI1YOR129C FCY21P40039 528 aa2.09□□□□□ -2.08
AFI1YOR129C RGI1P40043 161 aaPredicted RBP2.09□□□□□ -2.08
AFI1YOR129C COX15P40086 486 aa2.09□□□□□ -2.08
AFI1YOR129C YIL024CP40543 189 aa2.09□□□□□ -2.08
AFI1YOR129C SNL1P40548 159 aa2.09□□□□□ -2.08
AFI1YOR129C YJR111CP47148 283 aaKnown RBP2.09□□□□□ -2.08
AFI1YOR129C YJR141WP47172 347 aaPredicted RBP2.09□□□□□ -2.08
AFI1YOR129C CWC23P52868 283 aaPredicted RBP2.09□□□□□ -2.08
AFI1YOR129C SHY1P53266 389 aa2.09□□□□□ -2.08
AFI1YOR129C IZH1Q03419 316 aa2.09□□□□□ -2.08
AFI1YOR129C DXO1Q06349 442 aa2.09□□□□□ -2.08
AFI1YOR129C POS5Q06892 414 aa2.09□□□□□ -2.08
AFI1YOR129C AAD15Q08361 143 aa2.09□□□□□ -2.08
AFI1YOR129C TMS1Q12116 473 aa2.09□□□□□ -2.08
AFI1YOR129C NSL1Q12143 216 aa2.09□□□□□ -2.08
AFI1YOR129C FYV7Q12247 151 aa2.09□□□□□ -2.08
AFI1YOR129C RRP42Q12277 265 aaPredicted RBP2.09□□□□□ -2.08
AFI1YOR129C WTM1Q12363 437 aaKnown RBP2.09□□□□□ -2.08
AFI1YOR129C PAA1Q12447 191 aaKnown RBP2.09□□□□□ -2.08
AFI1YOR129C WIP1Q2V2P8 89 aa2.09□□□□□ -2.08
AFI1YOR129C YKL068W-AQ3E826 78 aa2.09□□□□□ -2.08
AFI1YOR129C REP1P03871 373 aa2.08□□□□□ -2.08
AFI1YOR129C DST1P07273 309 aa2.08□□□□□ -2.08
AFI1YOR129C MRP1P10662 321 aaKnown RBP2.08□□□□□ -2.08
AFI1YOR129C PMR1P13586 950 aa2.08□□□□□ -2.08
AFI1YOR129C RAD57P25301 460 aa2.08□□□□□ -2.08
AFI1YOR129C FUN19P28003 413 aaPredicted RBP2.08□□□□□ -2.08
AFI1YOR129C TRR1P29509 319 aaKnown RBP2.08□□□□□ -2.08
AFI1YOR129C VAM7P32912 316 aa2.08□□□□□ -2.08
AFI1YOR129C COS9P36034 407 aa2.08□□□□□ -2.08
AFI1YOR129C BIG1P38813 335 aa2.08□□□□□ -2.08
AFI1YOR129C BDH1P39714 382 aa2.08□□□□□ -2.08
AFI1YOR129C YNL194CP40169 301 aa2.08□□□□□ -2.08
AFI1YOR129C SNO3P43544 222 aa2.08□□□□□ -2.08
AFI1YOR129C RPC17P47076 161 aa2.08□□□□□ -2.08
AFI1YOR129C MOG1P47123 218 aa2.08□□□□□ -2.08
AFI1YOR129C STE24P47154 453 aa2.08□□□□□ -2.08
AFI1YOR129C RPL15BP54780 204 aaPredicted RBP2.08□□□□□ -2.08
AFI1YOR129C CTL1Q03220 320 aaKnown RBP2.08□□□□□ -2.08
AFI1YOR129C IPK1Q06667 281 aa2.08□□□□□ -2.08
AFI1YOR129C SSK1Q07084 712 aa2.08□□□□□ -2.08
AFI1YOR129C THP3Q12049 470 aaKnown RBP2.08□□□□□ -2.08
AFI1YOR129C PRP46Q12417 451 aaPredicted RBP2.08□□□□□ -2.08
AFI1YOR129C YCL001W-BQ96VH2 84 aa2.08□□□□□ -2.08
AFI1YOR129C SCEIP03882 235 aa2.08□□□□□ -2.08
AFI1YOR129C RPL25P04456 142 aaKnown RBP2.08□□□□□ -2.08
AFI1YOR129C PUT1P09368 476 aa2.08□□□□□ -2.08
AFI1YOR129C RPS28BP0C0X0 67 aaKnown RBP2.08□□□□□ -2.08
AFI1YOR129C YER190C-BP0CX94 160 aa2.08□□□□□ -2.08
AFI1YOR129C YEL077W-AP0CX95 160 aa2.08□□□□□ -2.08
AFI1YOR129C YGR296C-BP0CX96 160 aa2.08□□□□□ -2.08
AFI1YOR129C YPL283W-BP0CX97 160 aa2.08□□□□□ -2.08
AFI1YOR129C YPR204C-AP0CX98 160 aa2.08□□□□□ -2.08
AFI1YOR129C POX1P13711 748 aa2.08□□□□□ -2.08
AFI1YOR129C HPR1P17629 752 aaKnown RBP2.08□□□□□ -2.08
AFI1YOR129C SEC14P24280 304 aaKnown RBP2.08□□□□□ -2.08
AFI1YOR129C CPR4P25334 318 aa2.08□□□□□ -2.08
AFI1YOR129C PUT3P25502 979 aaPredicted RBP2.08□□□□□ -2.08
AFI1YOR129C ITR2P30606 609 aa2.08□□□□□ -2.08
AFI1YOR129C SNC1P31109 117 aa2.08□□□□□ -2.08
AFI1YOR129C RIM1P32445 135 aaKnown RBP2.08□□□□□ -2.08
AFI1YOR129C UTR4P32626 227 aa2.08□□□□□ -2.08
AFI1YOR129C RTC2P38279 296 aa2.08□□□□□ -2.08
AFI1YOR129C SHG1P38337 142 aa2.08□□□□□ -2.08
AFI1YOR129C YER130CP39959 443 aa2.08□□□□□ -2.08
AFI1YOR129C RMD6P39975 231 aa2.08□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms