RNA–Protein interactions for RNA: YNL224C

SQS1, Transcript of Protein that stimulates the ATPase and helicase activities of Prp43p, yeast

Gene SQS1, Length 2,304 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SQS1	YNL224C	SPP2	Q02521	185 aa		3.09	□□□□□ -1.91
SQS1	YNL224C	PFA5	Q03289	374 aa		3.09	□□□□□ -1.91
SQS1	YNL224C	HSP31	Q04432	237 aa		3.09	□□□□□ -1.91
SQS1	YNL224C	APC4	Q04601	652 aa		3.09	□□□□□ -1.91
SQS1	YNL224C	MRPL35	Q06678	367 aa		3.09	□□□□□ -1.91
SQS1	YNL224C	COS7	Q07788	383 aa		3.09	□□□□□ -1.91
SQS1	YNL224C	TPO1	Q07824	586 aa		3.09	□□□□□ -1.91
SQS1	YNL224C	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	3.09	□□□□□ -1.91	not detected
SQS1	YNL224C	ATX2	Q12067	313 aa		3.09	□□□□□ -1.91
SQS1	YNL224C	DCP1	Q12517	231 aa	Predicted RBP	3.09	□□□□□ -1.91
SQS1	YNL224C	YOR111W	Q99210	232 aa		3.09	□□□□□ -1.91
SQS1	YNL224C	POM152	P39685	1337 aa		3.09	□□□□□ -1.91
SQS1	YNL224C	GEA2	P39993	1459 aa	Known RBP	3.09	□□□□□ -1.91
SQS1	YNL224C	SSK2	P53599	1579 aa		3.09	□□□□□ -1.91
SQS1	YNL224C	RPL24A	P04449	155 aa	Known RBP	3.09	□□□□□ -1.92
SQS1	YNL224C	ILV5	P06168	395 aa	Known RBP	3.09	□□□□□ -1.92
SQS1	YNL224C	IMA3	P0CW40	589 aa		3.09	□□□□□ -1.92
SQS1	YNL224C	IMA4	P0CW41	589 aa		3.09	□□□□□ -1.92
SQS1	YNL224C	CCA1	P21269	546 aa		3.09	□□□□□ -1.92
SQS1	YNL224C	YCR015C	P25616	317 aa		3.09	□□□□□ -1.92
SQS1	YNL224C	APE2	P32454	952 aa	Known RBP	3.09	□□□□□ -1.92
SQS1	YNL224C	NDC1	P32500	655 aa		3.09	□□□□□ -1.92
SQS1	YNL224C	ISC10	P32645	267 aa		3.09	□□□□□ -1.92
SQS1	YNL224C	FRE1	P32791	686 aa		3.09	□□□□□ -1.92
SQS1	YNL224C	REC104	P33323	182 aa		3.09	□□□□□ -1.92
SQS1	YNL224C	ECT1	P33412	323 aa		3.09	□□□□□ -1.92
SQS1	YNL224C	MRPL3	P36516	390 aa		3.09	□□□□□ -1.92
SQS1	YNL224C	PRS4	P38063	326 aa	Predicted RBP	3.09	□□□□□ -1.92
SQS1	YNL224C	RRN10	P38204	145 aa		3.09	□□□□□ -1.92
SQS1	YNL224C	TRS20	P38334	175 aa		3.09	□□□□□ -1.92
SQS1	YNL224C	COS8	P38723	381 aa		3.09	□□□□□ -1.92
SQS1	YNL224C	YHL044W	P38727	235 aa		3.09	□□□□□ -1.92
SQS1	YNL224C	PHO90	P39535	881 aa		3.09	□□□□□ -1.92
SQS1	YNL224C	YIL060W	P40519	144 aa		3.09	□□□□□ -1.92
SQS1	YNL224C	GAT1	P43574	510 aa		3.09	□□□□□ -1.92
SQS1	YNL224C	MSO1	P53604	210 aa	Known RBP	3.09	□□□□□ -1.92
SQS1	YNL224C	ERG5	P54781	538 aa		3.09	□□□□□ -1.92
SQS1	YNL224C	YML096W	Q04489	525 aa		3.09	□□□□□ -1.92
SQS1	YNL224C	ECM30	Q06673	1274 aa		3.09	□□□□□ -1.92
SQS1	YNL224C	ASR1	Q06834	288 aa		3.09	□□□□□ -1.92
SQS1	YNL224C	IMA2	Q08295	589 aa		3.09	□□□□□ -1.92
SQS1	YNL224C	SYC1	Q08553	188 aa	Predicted RBP	3.09	□□□□□ -1.92
SQS1	YNL224C	FEX1	Q08913	375 aa		3.09	□□□□□ -1.92
SQS1	YNL224C	BTS1	Q12051	335 aa		3.09	□□□□□ -1.92
SQS1	YNL224C	GRE2	Q12068	342 aa	Known RBP	3.09	□□□□□ -1.92
SQS1	YNL224C	ERG27	Q12452	347 aa	Known RBP	3.09	□□□□□ -1.92
SQS1	YNL224C	RPN13	O13563	156 aa		3.08	□□□□□ -1.92
SQS1	YNL224C	DED1	P06634	604 aa	Known RBP	3.08	□□□□□ -1.92
SQS1	YNL224C	HAP2	P06774	265 aa		3.08	□□□□□ -1.92
SQS1	YNL224C	HTS1	P07263	546 aa	Known RBP	3.08	□□□□□ -1.92
SQS1	YNL224C	ERG11	P10614	530 aa		3.08	□□□□□ -1.92
SQS1	YNL224C	ADH7	P25377	361 aa		3.08	□□□□□ -1.92
SQS1	YNL224C	GAC1	P28006	793 aa		3.08	□□□□□ -1.92
SQS1	YNL224C	ARP2	P32381	391 aa	Known RBP	3.08	□□□□□ -1.92
SQS1	YNL224C	UTR2	P32623	467 aa		3.08	□□□□□ -1.92
SQS1	YNL224C	SKG6	P32900	734 aa	Predicted RBP	3.08	□□□□□ -1.92
SQS1	YNL224C	YPT7	P32939	208 aa		3.08	□□□□□ -1.92
SQS1	YNL224C	KTI12	P34253	313 aa	Known RBP	3.08	□□□□□ -1.92
SQS1	YNL224C	YKR041W	P36134	250 aa		3.08	□□□□□ -1.92
SQS1	YNL224C	YBR056W	P38081	501 aa		3.08	□□□□□ -1.92
SQS1	YNL224C	SLM4	P38247	162 aa		3.08	□□□□□ -1.92
SQS1	YNL224C	YPT35	P38815	214 aa	Known RBP	3.08	□□□□□ -1.92
SQS1	YNL224C	ELO1	P39540	310 aa		3.08	□□□□□ -1.92
SQS1	YNL224C	PFK26	P40433	827 aa	Known RBP	3.08	□□□□□ -1.92
SQS1	YNL224C	TIR3	P40552	269 aa		3.08	□□□□□ -1.92
SQS1	YNL224C	AAD14	P42884	376 aa		3.08	□□□□□ -1.92
SQS1	YNL224C	MIC19	P43594	170 aa		3.08	□□□□□ -1.92
SQS1	YNL224C	RPA34	P47006	233 aa	Predicted RBP	3.08	□□□□□ -1.92
SQS1	YNL224C	SPT20	P50875	604 aa		3.08	□□□□□ -1.92
SQS1	YNL224C	YPT32	P51996	222 aa	Known RBP	3.08	□□□□□ -1.92
SQS1	YNL224C	ERV14	P53173	138 aa		3.08	□□□□□ -1.92
SQS1	YNL224C	GET1	P53192	235 aa		3.08	□□□□□ -1.92
SQS1	YNL224C	GTR2	P53290	341 aa		3.08	□□□□□ -1.92
SQS1	YNL224C	BOR1	P53838	576 aa		3.08	□□□□□ -1.92
SQS1	YNL224C	YNL260C	P53846	198 aa		3.08	□□□□□ -1.92
SQS1	YNL224C	SEN15	Q04675	128 aa		3.08	□□□□□ -1.92
SQS1	YNL224C	ATG39	Q06159	398 aa		3.08	□□□□□ -1.92
SQS1	YNL224C	MRI1	Q06489	411 aa	Known RBP	3.08	□□□□□ -1.92
SQS1	YNL224C	VPS15	P22219	1454 aa		3.08	□□□□□ -1.92
SQS1	YNL224C	TY1A-DR4	O74302	440 aa		3.08	□□□□□ -1.92
SQS1	YNL224C	ARG82	P07250	355 aa		3.08	□□□□□ -1.92
SQS1	YNL224C	LYS2	P07702	1392 aa		3.08	□□□□□ -1.92
SQS1	YNL224C	TY1A-A	P0CX57	440 aa		3.08	□□□□□ -1.92
SQS1	YNL224C	TY1A-PR1	P0CX58	440 aa		3.08	□□□□□ -1.92
SQS1	YNL224C	TY1A-OR	P0CX59	440 aa		3.08	□□□□□ -1.92
SQS1	YNL224C	TY1A-PR2	P0CX60	440 aa		3.08	□□□□□ -1.92
SQS1	YNL224C	TY1A-DR5	P0CX65	440 aa		3.08	□□□□□ -1.92
SQS1	YNL224C	TY1A-ER2	P0CX66	440 aa		3.08	□□□□□ -1.92
SQS1	YNL224C	TY1A-GR3	P0CX67	440 aa		3.08	□□□□□ -1.92
SQS1	YNL224C	TY1A-LR1	P0CX68	440 aa		3.08	□□□□□ -1.92
SQS1	YNL224C	TY1A-MR2	P0CX69	440 aa		3.08	□□□□□ -1.92
SQS1	YNL224C	STP22	P25604	385 aa		3.08	□□□□□ -1.92
SQS1	YNL224C	ILV6	P25605	309 aa	Known RBP	3.08	□□□□□ -1.92
SQS1	YNL224C	TIR2	P33890	251 aa		3.08	□□□□□ -1.92
SQS1	YNL224C	YPT53	P36019	220 aa		3.08	□□□□□ -1.92
SQS1	YNL224C	PET10	P36139	283 aa		3.08	□□□□□ -1.92
SQS1	YNL224C	TFA2	P36145	328 aa		3.08	□□□□□ -1.92
SQS1	YNL224C	CBP4	P37267	147 aa		3.08	□□□□□ -1.92
SQS1	YNL224C	MRPL16	P38064	232 aa		3.08	□□□□□ -1.92
SQS1	YNL224C	ARA1	P38115	344 aa		3.08	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 48.9 ms