RNA–Protein interactions for RNA: YNL079C

TPM1, Transcript of Major isoform of tropomyosin, yeastyeast

Gene TPM1, Length 600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TPM1YNL079C GPH1P06738 902 aaKnown RBP3.28□□□□□ -1.88
TPM1YNL079C REV1P12689 985 aa3.28□□□□□ -1.88
TPM1YNL079C CCA1P21269 546 aa3.28□□□□□ -1.88
TPM1YNL079C MRPS28P21771 286 aa3.28□□□□□ -1.88
TPM1YNL079C PRP21P32524 280 aaPredicted RBP3.28□□□□□ -1.88
TPM1YNL079C COX13P32799 129 aa3.28□□□□□ -1.88
TPM1YNL079C YME2P32843 850 aa3.28□□□□□ -1.88
TPM1YNL079C RPS1AP33442 255 aaKnown RBP3.28□□□□□ -1.88
TPM1YNL079C TIP20P33891 701 aa3.28□□□□□ -1.88
TPM1YNL079C RSM22P36056 628 aa3.28□□□□□ -1.88
TPM1YNL079C CAF4P36130 643 aa3.28□□□□□ -1.88
TPM1YNL079C IST2P38250 946 aa3.28□□□□□ -1.88
TPM1YNL079C CYC2P38909 366 aa3.28□□□□□ -1.88
TPM1YNL079C HEM14P40012 539 aa3.28□□□□□ -1.88
TPM1YNL079C GCD10P41814 478 aa3.28□□□□□ -1.88
TPM1YNL079C TIS11P47977 285 aa3.28□□□□□ -1.88
TPM1YNL079C VMA10P48836 114 aaKnown RBP3.28□□□□□ -1.88
TPM1YNL079C NAS6P50086 228 aa3.28□□□□□ -1.88
TPM1YNL079C PRM1P53835 661 aa3.28□□□□□ -1.88
TPM1YNL079C MMT1Q03218 510 aa3.28□□□□□ -1.88
TPM1YNL079C GMC2Q06201 188 aa3.28□□□□□ -1.88
TPM1YNL079C ISN1Q99312 450 aa3.28□□□□□ -1.88
TPM1YNL079C YOR338WQ99326 363 aa3.28□□□□□ -1.88
TPM1YNL079C VPS13Q07878 3144 aa3.27□□□□□ -1.89
TPM1YNL079C SPT3P06844 337 aa3.27□□□□□ -1.89
TPM1YNL079C BCY1P07278 416 aaKnown RBP3.27□□□□□ -1.89
TPM1YNL079C RIP1P08067 215 aa3.27□□□□□ -1.89
TPM1YNL079C RSR1P13856 272 aa3.27□□□□□ -1.89
TPM1YNL079C MSS116P15424 664 aaKnown RBP3.27□□□□□ -1.89
TPM1YNL079C UGA1P17649 471 aa3.27□□□□□ -1.89
TPM1YNL079C UBA1P22515 1024 aaKnown RBP3.27□□□□□ -1.89
TPM1YNL079C RVS161P25343 265 aaKnown RBP3.27□□□□□ -1.89
TPM1YNL079C PUT3P25502 979 aaPredicted RBP3.27□□□□□ -1.89
TPM1YNL079C CIN8P27895 1000 aa3.27□□□□□ -1.89
TPM1YNL079C AGA1P32323 725 aa3.27□□□□□ -1.89
TPM1YNL079C SPS19P32573 292 aaKnown RBP3.27□□□□□ -1.89
TPM1YNL079C REC114P32841 428 aa3.27□□□□□ -1.89
TPM1YNL079C PRP18P33411 251 aaPredicted RBP3.27□□□□□ -1.89
TPM1YNL079C SLM4P38247 162 aa3.27□□□□□ -1.89
TPM1YNL079C KRE9P39005 276 aa3.27□□□□□ -1.89
TPM1YNL079C TIM17P39515 158 aa3.27□□□□□ -1.89
TPM1YNL079C NPT1P39683 429 aaKnown RBP3.27□□□□□ -1.89
TPM1YNL079C ISC1P40015 477 aaKnown RBP3.27□□□□□ -1.89
TPM1YNL079C YER034WP40022 185 aaKnown RBP3.27□□□□□ -1.89
TPM1YNL079C PDS1P40316 373 aaPredicted RBP3.27□□□□□ -1.89
TPM1YNL079C SNL1P40548 159 aa3.27□□□□□ -1.89
TPM1YNL079C FMP32P43557 207 aa3.27□□□□□ -1.89
TPM1YNL079C YPT32P51996 222 aaKnown RBP3.27□□□□□ -1.89
TPM1YNL079C OGG1P53397 376 aaPredicted RBP3.27□□□□□ -1.89
TPM1YNL079C FRE4P53746 719 aa3.27□□□□□ -1.89
TPM1YNL079C VAC7P53950 1165 aa3.27□□□□□ -1.89
TPM1YNL079C YNL033WP53964 284 aa3.27□□□□□ -1.89
TPM1YNL079C YNL019CP53975 284 aa3.27□□□□□ -1.89
TPM1YNL079C SKI8Q02793 397 aaPredicted RBP3.27□□□□□ -1.89
TPM1YNL079C SPO19Q03029 223 aa3.27□□□□□ -1.89
TPM1YNL079C ECM11Q04110 302 aa3.27□□□□□ -1.89
TPM1YNL079C YMR111CQ04461 462 aaPredicted RBP3.27□□□□□ -1.89
TPM1YNL079C YDR124WQ04608 324 aa3.27□□□□□ -1.89
TPM1YNL079C BCH1Q05029 724 aa3.27□□□□□ -1.89
TPM1YNL079C CLP1Q08685 445 aaPredicted RBP3.27□□□□□ -1.89
TPM1YNL079C SLF1Q12034 447 aaKnown RBP3.27□□□□□ -1.89
TPM1YNL079C PER33Q12144 273 aa3.27□□□□□ -1.89
TPM1YNL079C YOR012WQ12351 137 aa3.27□□□□□ -1.89
TPM1YNL079C GTT2Q12390 233 aa3.27□□□□□ -1.89
TPM1YNL079C THP2O13539 261 aaKnown RBP3.26□□□□□ -1.89
TPM1YNL079C CBP2P03874 630 aaPredicted RBP3.26□□□□□ -1.89
TPM1YNL079C CDC21P06785 304 aa3.26□□□□□ -1.89
TPM1YNL079C YAR066WP0CX18 203 aa3.26□□□□□ -1.89
TPM1YNL079C YHR214WP0CX19 203 aa3.26□□□□□ -1.89
TPM1YNL079C SEC63P14906 663 aa3.26□□□□□ -1.89
TPM1YNL079C PDX1P16451 410 aa3.26□□□□□ -1.89
TPM1YNL079C RNA14P25298 677 aaKnown RBP3.26□□□□□ -1.89
TPM1YNL079C YCR100CP25606 316 aa3.26□□□□□ -1.89
TPM1YNL079C BRF1P29056 596 aa3.26□□□□□ -1.89
TPM1YNL079C CRM1P30822 1084 aaKnown RBP3.26□□□□□ -1.89
TPM1YNL079C CBF5P33322 483 aaKnown RBP RIP-Chip data3.26□□□□□ -1.89not detected
TPM1YNL079C PXA2P34230 853 aa3.26□□□□□ -1.89
TPM1YNL079C YPT52P36018 234 aaKnown RBP3.26□□□□□ -1.89
TPM1YNL079C MRPL17P36528 281 aa3.26□□□□□ -1.89
TPM1YNL079C LRP1P38801 184 aaKnown RBP3.26□□□□□ -1.89
TPM1YNL079C TDA11P38854 504 aa3.26□□□□□ -1.89
TPM1YNL079C YHR218WP38899 603 aa3.26□□□□□ -1.89
TPM1YNL079C FAD1P38913 306 aa3.26□□□□□ -1.89
TPM1YNL079C FAA2P39518 744 aa3.26□□□□□ -1.89
TPM1YNL079C AYR1P40471 297 aa3.26□□□□□ -1.89
TPM1YNL079C MOB1P40484 314 aa3.26□□□□□ -1.89
TPM1YNL079C ERG10P41338 398 aaKnown RBP3.26□□□□□ -1.89
TPM1YNL079C SSU1P41930 458 aa3.26□□□□□ -1.89
TPM1YNL079C GLG2P47011 380 aa3.26□□□□□ -1.89
TPM1YNL079C GTO1P48239 356 aa3.26□□□□□ -1.89
TPM1YNL079C VEL1P53058 206 aa3.26□□□□□ -1.89
TPM1YNL079C EMC4P53073 190 aa3.26□□□□□ -1.89
TPM1YNL079C FLC3P53121 802 aa3.26□□□□□ -1.89
TPM1YNL079C YNL095CP53932 642 aa3.26□□□□□ -1.89
TPM1YNL079C RRP45Q05636 305 aaKnown RBP3.26□□□□□ -1.89
TPM1YNL079C GET4Q12125 312 aa3.26□□□□□ -1.89
TPM1YNL079C YOR342CQ12182 319 aa3.26□□□□□ -1.89
TPM1YNL079C PSY3Q12318 242 aa3.26□□□□□ -1.89
TPM1YNL079C JLP1Q12358 412 aa3.26□□□□□ -1.89
TPM1YNL079C YKL018C-AQ3E7A7 99 aa3.26□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 30.9 ms