RNA–Protein interactions for RNA: YMR183C

SSO2, Transcript of Plasma membrane t-SNARE, yeastyeast

Gene SSO2, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSO2YMR183C MET5P47169 1442 aa3.38□□□□□ -1.87
SSO2YMR183C THP2O13539 261 aaKnown RBP3.38□□□□□ -1.87
SSO2YMR183C ILV1P00927 576 aaKnown RBP3.38□□□□□ -1.87
SSO2YMR183C TEF1P02994 458 aaKnown RBP3.38□□□□□ -1.87
SSO2YMR183C YCR100CP25606 316 aa3.38□□□□□ -1.87
SSO2YMR183C ITR2P30606 609 aa3.38□□□□□ -1.87
SSO2YMR183C VMA6P32366 345 aaKnown RBP3.38□□□□□ -1.87
SSO2YMR183C IES6P32617 166 aa3.38□□□□□ -1.87
SSO2YMR183C ZRT1P32804 376 aa3.38□□□□□ -1.87
SSO2YMR183C PTR2P32901 601 aa3.38□□□□□ -1.87
SSO2YMR183C ECM15P35195 104 aa3.38□□□□□ -1.87
SSO2YMR183C CBT1P36038 271 aaPredicted RBP3.38□□□□□ -1.87
SSO2YMR183C RIB1P38066 345 aa3.38□□□□□ -1.87
SSO2YMR183C MIC12P38341 106 aa3.38□□□□□ -1.87
SSO2YMR183C UTP18P40362 594 aaPredicted RBP3.38□□□□□ -1.87
SSO2YMR183C CSM2P40465 213 aa3.38□□□□□ -1.87
SSO2YMR183C YRB1P41920 201 aaKnown RBP3.38□□□□□ -1.87
SSO2YMR183C YGL082WP53155 381 aa3.38□□□□□ -1.87
SSO2YMR183C YNR048WP53740 393 aa3.38□□□□□ -1.87
SSO2YMR183C NUP116Q02630 1113 aa3.38□□□□□ -1.87
SSO2YMR183C IRC4Q03036 179 aa3.38□□□□□ -1.87
SSO2YMR183C KRE28Q04431 385 aa3.38□□□□□ -1.87
SSO2YMR183C CSM3Q04659 317 aa3.38□□□□□ -1.87
SSO2YMR183C DCR2Q05924 578 aa3.38□□□□□ -1.87
SSO2YMR183C POM152P39685 1337 aa3.38□□□□□ -1.87
SSO2YMR183C TAF2P23255 1407 aa3.37□□□□□ -1.87
SSO2YMR183C HIS1P00498 297 aaKnown RBP3.37□□□□□ -1.87
SSO2YMR183C ATP6P00854 259 aa3.37□□□□□ -1.87
SSO2YMR183C PAB1P04147 577 aaKnown RBP RIP-Chip data3.37□□□□□ -1.87not detected
SSO2YMR183C CBF1P17106 351 aa3.37□□□□□ -1.87
SSO2YMR183C MKK1P32490 508 aa3.37□□□□□ -1.87
SSO2YMR183C YEF1P32622 495 aa3.37□□□□□ -1.87
SSO2YMR183C MCR1P36060 302 aaKnown RBP3.37□□□□□ -1.87
SSO2YMR183C GEP4P38812 185 aa3.37□□□□□ -1.87
SSO2YMR183C YIA6P40556 373 aa3.37□□□□□ -1.87
SSO2YMR183C KEG1P43614 200 aa3.37□□□□□ -1.87
SSO2YMR183C YJR030CP47101 745 aa3.37□□□□□ -1.87
SSO2YMR183C SAM50P53969 484 aa3.37□□□□□ -1.87
SSO2YMR183C IRC15Q02733 499 aa3.37□□□□□ -1.87
SSO2YMR183C MRPL51Q06090 140 aaPredicted RBP3.37□□□□□ -1.87
SSO2YMR183C ASR1Q06834 288 aa3.37□□□□□ -1.87
SSO2YMR183C THI20Q08224 551 aa3.37□□□□□ -1.87
SSO2YMR183C TIM18Q08749 192 aa3.37□□□□□ -1.87
SSO2YMR183C MUM3Q08750 479 aa3.37□□□□□ -1.87
SSO2YMR183C YOR387CQ08910 206 aa3.37□□□□□ -1.87
SSO2YMR183C TPT1Q12272 230 aaKnown RBP3.37□□□□□ -1.87
SSO2YMR183C MEX67Q99257 599 aaKnown RBP3.37□□□□□ -1.87
SSO2YMR183C DET1Q99288 334 aaKnown RBP3.37□□□□□ -1.87
SSO2YMR183C AI5_BETAQ9ZZX0 354 aa3.37□□□□□ -1.87
SSO2YMR183C SIN3P22579 1536 aa3.37□□□□□ -1.87
SSO2YMR183C RPL27AP0C2H6 136 aaKnown RBP3.36□□□□□ -1.87
SSO2YMR183C RPL27BP0C2H7 136 aaKnown RBP3.36□□□□□ -1.87
SSO2YMR183C SSC1P0CS90 654 aaKnown RBP3.36□□□□□ -1.87
SSO2YMR183C GLN3P18494 730 aa3.36□□□□□ -1.87
SSO2YMR183C DCC1P25559 380 aa3.36□□□□□ -1.87
SSO2YMR183C TIP1P27654 210 aaPredicted RBP3.36□□□□□ -1.87
SSO2YMR183C NUP2P32499 720 aa3.36□□□□□ -1.87
SSO2YMR183C LOS1P33418 1100 aaPredicted RBP3.36□□□□□ -1.87
SSO2YMR183C RTC3P38804 111 aaPredicted RBP3.36□□□□□ -1.87
SSO2YMR183C YPT35P38815 214 aaKnown RBP3.36□□□□□ -1.87
SSO2YMR183C EGD2P38879 174 aaKnown RBP3.36□□□□□ -1.87
SSO2YMR183C VPS52P39904 641 aa3.36□□□□□ -1.87
SSO2YMR183C ERG28P40030 148 aa3.36□□□□□ -1.87
SSO2YMR183C DDI1P40087 428 aa3.36□□□□□ -1.87
SSO2YMR183C AZF1P41696 914 aa3.36□□□□□ -1.87
SSO2YMR183C YCH1P42937 148 aa3.36□□□□□ -1.87
SSO2YMR183C GLG2P47011 380 aa3.36□□□□□ -1.87
SSO2YMR183C RTT101P47050 842 aa3.36□□□□□ -1.87
SSO2YMR183C TAD2P47058 250 aa3.36□□□□□ -1.87
SSO2YMR183C TRM112P53738 135 aaPredicted RBP3.36□□□□□ -1.87
SSO2YMR183C YNL247WP53852 767 aaKnown RBP3.36□□□□□ -1.87
SSO2YMR183C ODC1Q03028 310 aa3.36□□□□□ -1.87
SSO2YMR183C YDR209CQ03480 137 aa3.36□□□□□ -1.87
SSO2YMR183C FUS2Q05670 677 aa3.36□□□□□ -1.87
SSO2YMR183C BNA5Q05979 453 aa3.36□□□□□ -1.87
SSO2YMR183C VPS74Q06385 345 aa3.36□□□□□ -1.87
SSO2YMR183C GAT3Q07928 141 aa3.36□□□□□ -1.87
SSO2YMR183C ALE1Q08548 619 aa3.36□□□□□ -1.87
SSO2YMR183C YLR108CQ12259 485 aa3.36□□□□□ -1.87
SSO2YMR183C SNF8Q12483 233 aa3.36□□□□□ -1.87
SSO2YMR183C CSR2Q12734 1121 aa3.36□□□□□ -1.87
SSO2YMR183C YBL111CQ3E7Y5 667 aa3.36□□□□□ -1.87
SSO2YMR183C NCB2Q92317 146 aa3.36□□□□□ -1.87
SSO2YMR183C LAG2Q92325 660 aa3.36□□□□□ -1.87
SSO2YMR183C IZH4Q99393 312 aa3.36□□□□□ -1.87
SSO2YMR183C LTE1P07866 1435 aa3.36□□□□□ -1.87
SSO2YMR183C SKI3P17883 1432 aaKnown RBP3.36□□□□□ -1.87
SSO2YMR183C DNF1P32660 1571 aa3.35□□□□□ -1.87
SSO2YMR183C TCP1P12612 559 aaKnown RBP3.35□□□□□ -1.87
SSO2YMR183C POX1P13711 748 aa3.35□□□□□ -1.87
SSO2YMR183C SPC34P36131 295 aa3.35□□□□□ -1.87
SSO2YMR183C GPX2P38143 162 aa3.35□□□□□ -1.87
SSO2YMR183C YHR035WP38769 630 aa3.35□□□□□ -1.87
SSO2YMR183C YHK8P38776 514 aa3.35□□□□□ -1.87
SSO2YMR183C THO1P40040 218 aaKnown RBP3.35□□□□□ -1.87
SSO2YMR183C DSN1P40568 576 aa3.35□□□□□ -1.87
SSO2YMR183C GWT1P47026 490 aa3.35□□□□□ -1.87
SSO2YMR183C ABM1P47146 123 aa3.35□□□□□ -1.87
SSO2YMR183C CPD1P53314 239 aa3.35□□□□□ -1.87
SSO2YMR183C ZRG17P53735 605 aa3.35□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms