RNA–Protein interactions for RNA: YMR048W

CSM3, Transcript of Replication fork associated factor, yeastyeast

Gene CSM3, Length 954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSM3YMR048W ARF1P11076 181 aaKnown RBP3.15□□□□□ -1.91
CSM3YMR048W RRT12P25381 491 aa3.15□□□□□ -1.91
CSM3YMR048W KAR9P32526 644 aa3.15□□□□□ -1.91
CSM3YMR048W CSE1P33307 960 aa3.15□□□□□ -1.91
CSM3YMR048W CSE2P33308 149 aa3.15□□□□□ -1.91
CSM3YMR048W SWC5P38326 303 aa3.15□□□□□ -1.91
CSM3YMR048W TVP23P38962 199 aa3.15□□□□□ -1.91
CSM3YMR048W PRM9P39551 298 aa3.15□□□□□ -1.91
CSM3YMR048W SIM1P40472 476 aa3.15□□□□□ -1.91
CSM3YMR048W HAC1P41546 238 aa3.15□□□□□ -1.91
CSM3YMR048W ASN2P49090 572 aaKnown RBP3.15□□□□□ -1.91
CSM3YMR048W TRM112P53738 135 aaPredicted RBP3.15□□□□□ -1.91
CSM3YMR048W ARO80Q04052 950 aa3.15□□□□□ -1.91
CSM3YMR048W NDL1Q06568 189 aa3.15□□□□□ -1.91
CSM3YMR048W EAF3Q12432 401 aa3.15□□□□□ -1.91
CSM3YMR048W HTZ1Q12692 134 aaKnown RBP3.15□□□□□ -1.91
CSM3YMR048W YLR462WO13556 202 aa3.14□□□□□ -1.91
CSM3YMR048W COX4P04037 155 aa3.14□□□□□ -1.91
CSM3YMR048W PIS1P06197 220 aaKnown RBP3.14□□□□□ -1.91
CSM3YMR048W MAS1P10507 462 aa3.14□□□□□ -1.91
CSM3YMR048W SKT5P34226 696 aa3.14□□□□□ -1.91
CSM3YMR048W YHL049CP38722 271 aa3.14□□□□□ -1.91
CSM3YMR048W YEL075CP39972 122 aa3.14□□□□□ -1.91
CSM3YMR048W YER189WP40104 122 aa3.14□□□□□ -1.91
CSM3YMR048W YFL064CP43540 174 aa3.14□□□□□ -1.91
CSM3YMR048W LCB3P47013 409 aa3.14□□□□□ -1.91
CSM3YMR048W YJR079WP47126 109 aa3.14□□□□□ -1.91
CSM3YMR048W CWC22P53333 577 aaKnown RBP3.14□□□□□ -1.91
CSM3YMR048W EOS1P53938 366 aa3.14□□□□□ -1.91
CSM3YMR048W VTI1Q04338 217 aa3.14□□□□□ -1.91
CSM3YMR048W MDM36Q06820 579 aa3.14□□□□□ -1.91
CSM3YMR048W LOT6Q07923 191 aa3.14□□□□□ -1.91
CSM3YMR048W CLP1Q08685 445 aaPredicted RBP3.14□□□□□ -1.91
CSM3YMR048W RNH203Q12338 110 aa3.14□□□□□ -1.91
CSM3YMR048W AHC1Q12433 566 aa3.14□□□□□ -1.91
CSM3YMR048W YBL111CQ3E7Y5 667 aa3.14□□□□□ -1.91
CSM3YMR048W TOM1Q03280 3268 aa3.13□□□□□ -1.91
CSM3YMR048W MRPL25P23369 157 aa3.13□□□□□ -1.91
CSM3YMR048W PUP2P32379 260 aa3.13□□□□□ -1.91
CSM3YMR048W YEF1P32622 495 aa3.13□□□□□ -1.91
CSM3YMR048W RAD5P32849 1169 aaPredicted RBP3.13□□□□□ -1.91
CSM3YMR048W SGE1P33335 543 aa3.13□□□□□ -1.91
CSM3YMR048W GDT1P38301 280 aaPredicted RBP3.13□□□□□ -1.91
CSM3YMR048W ATG12P38316 186 aa3.13□□□□□ -1.91
CSM3YMR048W MMS21P38632 267 aa3.13□□□□□ -1.91
CSM3YMR048W MLH1P38920 769 aa3.13□□□□□ -1.91
CSM3YMR048W UTP18P40362 594 aaPredicted RBP3.13□□□□□ -1.91
CSM3YMR048W YFR057WP43625 151 aa3.13□□□□□ -1.91
CSM3YMR048W AIM24P47127 394 aa3.13□□□□□ -1.91
CSM3YMR048W YMR102CQ03177 834 aa3.13□□□□□ -1.91
CSM3YMR048W KAP95Q06142 861 aaKnown RBP3.13□□□□□ -1.91
CSM3YMR048W ASA1Q06822 443 aa3.13□□□□□ -1.91
CSM3YMR048W AAD15Q08361 143 aa3.13□□□□□ -1.91
CSM3YMR048W YOP1Q12402 180 aa3.13□□□□□ -1.91
CSM3YMR048W FRE6Q12473 712 aa3.13□□□□□ -1.91
CSM3YMR048W SRN2Q99176 213 aa3.13□□□□□ -1.91
CSM3YMR048W SEY1Q99287 776 aa3.13□□□□□ -1.91
CSM3YMR048W QCR6P00127 147 aa3.12□□□□□ -1.91
CSM3YMR048W RPL12AP0CX53 165 aaKnown RBP3.12□□□□□ -1.91
CSM3YMR048W RPL12BP0CX54 165 aa3.12□□□□□ -1.91
CSM3YMR048W RPL4AP10664 362 aaKnown RBP3.12□□□□□ -1.91
CSM3YMR048W RPO26P20435 155 aa3.12□□□□□ -1.91
CSM3YMR048W TRX1P22217 103 aaKnown RBP3.12□□□□□ -1.91
CSM3YMR048W PHA2P32452 334 aa3.12□□□□□ -1.91
CSM3YMR048W GCG1P32656 232 aaKnown RBP3.12□□□□□ -1.91
CSM3YMR048W SRB2P34162 210 aa3.12□□□□□ -1.91
CSM3YMR048W PCH2P38126 564 aa3.12□□□□□ -1.91
CSM3YMR048W ECM13P38195 257 aa3.12□□□□□ -1.91
CSM3YMR048W SPP381P38282 291 aaPredicted RBP3.12□□□□□ -1.91
CSM3YMR048W POP4P38336 279 aa3.12□□□□□ -1.91
CSM3YMR048W YHR131CP38835 850 aa3.12□□□□□ -1.91
CSM3YMR048W LCP5P40079 357 aaPredicted RBP3.12□□□□□ -1.91
CSM3YMR048W MOB1P40484 314 aa3.12□□□□□ -1.91
CSM3YMR048W YJR085CP47131 105 aaKnown RBP3.12□□□□□ -1.91
CSM3YMR048W STE24P47154 453 aa3.12□□□□□ -1.91
CSM3YMR048W RPL4BP49626 362 aaKnown RBP3.12□□□□□ -1.91
CSM3YMR048W PRP3Q03338 469 aaPredicted RBP3.12□□□□□ -1.91
CSM3YMR048W URC2Q04411 772 aa3.12□□□□□ -1.91
CSM3YMR048W YMR114CQ04471 368 aaKnown RBP3.12□□□□□ -1.91
CSM3YMR048W PRM6Q04705 352 aa3.12□□□□□ -1.91
CSM3YMR048W YDR222WQ04925 415 aa3.12□□□□□ -1.91
CSM3YMR048W RTN1Q04947 295 aaKnown RBP3.12□□□□□ -1.91
CSM3YMR048W RIF2Q06208 395 aa3.12□□□□□ -1.91
CSM3YMR048W NOP6Q07623 225 aaKnown RBP3.12□□□□□ -1.91
CSM3YMR048W YGK3Q12222 375 aaPredicted RBP3.12□□□□□ -1.91
CSM3YMR048W EFG1Q3E705 233 aaKnown RBP3.12□□□□□ -1.91
CSM3YMR048W ECM29P38737 1868 aa3.11□□□□□ -1.91
CSM3YMR048W RIF1P29539 1916 aa3.11□□□□□ -1.91
CSM3YMR048W HIS1P00498 297 aaKnown RBP3.11□□□□□ -1.91
CSM3YMR048W DPH5P32469 300 aaPredicted RBP3.11□□□□□ -1.91
CSM3YMR048W MAK5P38112 773 aaPredicted RBP3.11□□□□□ -1.91
CSM3YMR048W ECM8P38246 354 aa3.11□□□□□ -1.91
CSM3YMR048W AIM18P38884 321 aa3.11□□□□□ -1.91
CSM3YMR048W END3P39013 349 aa3.11□□□□□ -1.91
CSM3YMR048W AIM10P39965 576 aaKnown RBP3.11□□□□□ -1.91
CSM3YMR048W YMR134WP40207 237 aa3.11□□□□□ -1.91
CSM3YMR048W SEC9P40357 651 aa3.11□□□□□ -1.91
CSM3YMR048W YIL054WP40524 105 aa3.11□□□□□ -1.91
CSM3YMR048W INA22P40576 216 aa3.11□□□□□ -1.91
CSM3YMR048W BIR1P47134 954 aa3.11□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms