RNA–Protein interactions for RNA: YLR403W

SFP1, Transcript of Regulates transcription of ribosomal protein and biogenesis genes, yeastyeast

Gene SFP1, Length 2,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFP1YLR403W YNR021WP53723 404 aaKnown RBP8.5□□□□□ -1.05
SFP1YLR403W YNL034WP53963 612 aa8.5□□□□□ -1.05
SFP1YLR403W YNL018CP53976 612 aa8.5□□□□□ -1.05
SFP1YLR403W ARA2Q04212 335 aa8.5□□□□□ -1.05
SFP1YLR403W YMR253CQ04835 414 aa8.5□□□□□ -1.05
SFP1YLR403W CDD1Q06549 142 aa8.5□□□□□ -1.05
SFP1YLR403W MSF1P08425 469 aa8.49□□□□□ -1.05
SFP1YLR403W ATP5P09457 212 aa8.49□□□□□ -1.05
SFP1YLR403W NAM2P11325 894 aa8.49□□□□□ -1.05
SFP1YLR403W SNF6P18888 332 aa8.49□□□□□ -1.05
SFP1YLR403W SNC1P31109 117 aa8.49□□□□□ -1.05
SFP1YLR403W RIB5P38145 238 aa8.49□□□□□ -1.05
SFP1YLR403W PFS1P38872 237 aa8.49□□□□□ -1.05
SFP1YLR403W SNM1P40993 198 aa8.49□□□□□ -1.05
SFP1YLR403W ASN2P49090 572 aaKnown RBP8.49□□□□□ -1.05
SFP1YLR403W TRM9P49957 279 aa8.49□□□□□ -1.05
SFP1YLR403W SGF73P53165 657 aa8.49□□□□□ -1.05
SFP1YLR403W YGR151CP53287 111 aa8.49□□□□□ -1.05
SFP1YLR403W GIS1Q03833 894 aa8.49□□□□□ -1.05
SFP1YLR403W RIF2Q06208 395 aa8.49□□□□□ -1.05
SFP1YLR403W MED7Q08278 222 aa8.49□□□□□ -1.05
SFP1YLR403W MHT1Q12525 324 aa8.49□□□□□ -1.05
SFP1YLR403W COX2P00410 251 aa8.49□□□□□ -1.05
SFP1YLR403W WBP1P33767 430 aaKnown RBP8.49□□□□□ -1.05
SFP1YLR403W MCH2P36032 473 aa8.49□□□□□ -1.05
SFP1YLR403W DOA1P36037 715 aa8.49□□□□□ -1.05
SFP1YLR403W IRS4P36115 615 aaKnown RBP8.49□□□□□ -1.05
SFP1YLR403W LSM5P40089 93 aaKnown RBP8.49□□□□□ -1.05
SFP1YLR403W MRPL19P53875 158 aa8.49□□□□□ -1.05
SFP1YLR403W YDR132CQ03900 495 aa8.49□□□□□ -1.05
SFP1YLR403W CTK1Q03957 528 aaKnown RBP8.49□□□□□ -1.05
SFP1YLR403W ECM30Q06673 1274 aa8.49□□□□□ -1.05
SFP1YLR403W LEA1Q08963 238 aaPredicted RBP8.49□□□□□ -1.05
SFP1YLR403W SRL2Q12020 392 aa8.49□□□□□ -1.05
SFP1YLR403W AIM45Q12480 344 aaKnown RBP8.49□□□□□ -1.05
SFP1YLR403W RMD5Q12508 421 aa8.49□□□□□ -1.05
SFP1YLR403W SLO1Q3E784 85 aa8.49□□□□□ -1.05
SFP1YLR403W YDL085C-AQ3E7B7 68 aaKnown RBP8.49□□□□□ -1.05
SFP1YLR403W PPH21P23594 369 aa8.48□□□□□ -1.05
SFP1YLR403W MRPL28P36527 147 aa8.48□□□□□ -1.05
SFP1YLR403W ARP1P38696 384 aa8.48□□□□□ -1.05
SFP1YLR403W YHR035WP38769 630 aa8.48□□□□□ -1.05
SFP1YLR403W PHO90P39535 881 aa8.48□□□□□ -1.05
SFP1YLR403W HXT8P40886 569 aa8.48□□□□□ -1.05
SFP1YLR403W SMK1P41808 388 aa8.48□□□□□ -1.05
SFP1YLR403W GLR1P41921 483 aaKnown RBP8.48□□□□□ -1.05
SFP1YLR403W GWT1P47026 490 aa8.48□□□□□ -1.05
SFP1YLR403W ARG5,6Q01217 863 aa8.48□□□□□ -1.05
SFP1YLR403W YVH1Q02256 364 aaKnown RBP8.48□□□□□ -1.05
SFP1YLR403W CUE4Q04201 117 aaPredicted RBP8.48□□□□□ -1.05
SFP1YLR403W RRP45Q05636 305 aaKnown RBP8.48□□□□□ -1.05
SFP1YLR403W MRPL35Q06678 367 aa8.48□□□□□ -1.05
SFP1YLR403W ASR1Q06834 288 aa8.48□□□□□ -1.05
SFP1YLR403W PUN1Q06991 263 aa8.48□□□□□ -1.05
SFP1YLR403W YPL245WQ12179 454 aaKnown RBP8.48□□□□□ -1.05
SFP1YLR403W PDH1Q12428 516 aaKnown RBP8.48□□□□□ -1.05
SFP1YLR403W YRF1-1P0CX20 1796 aa8.48□□□□□ -1.05
SFP1YLR403W YRF1-5P0CX21 1796 aa8.48□□□□□ -1.05
SFP1YLR403W YRF1-8P0CX22 1796 aa8.48□□□□□ -1.05
SFP1YLR403W QCR2P07257 368 aa8.47□□□□□ -1.05
SFP1YLR403W SCL1P21243 252 aaKnown RBP8.47□□□□□ -1.05
SFP1YLR403W EHD3P28817 500 aa8.47□□□□□ -1.05
SFP1YLR403W UGX2P32772 223 aa8.47□□□□□ -1.05
SFP1YLR403W MTH1P35198 433 aa8.47□□□□□ -1.05
SFP1YLR403W DTR1P38125 572 aa8.47□□□□□ -1.05
SFP1YLR403W PNT1P38969 423 aa8.47□□□□□ -1.05
SFP1YLR403W YER188WP40103 239 aa8.47□□□□□ -1.05
SFP1YLR403W RPA49Q01080 415 aaPredicted RBP8.47□□□□□ -1.05
SFP1YLR403W TRM44Q02648 567 aaKnown RBP8.47□□□□□ -1.05
SFP1YLR403W CGI121Q03705 181 aaKnown RBP8.47□□□□□ -1.05
SFP1YLR403W POM33Q12164 279 aa8.47□□□□□ -1.05
SFP1YLR403W COX5BP00425 151 aa8.47□□□□□ -1.05
SFP1YLR403W RHO2P06781 192 aa8.47□□□□□ -1.05
SFP1YLR403W ERR1P0CX10 437 aa8.47□□□□□ -1.05
SFP1YLR403W ERR2P0CX11 437 aa8.47□□□□□ -1.05
SFP1YLR403W ATG15P25641 520 aa8.47□□□□□ -1.05
SFP1YLR403W AAR2P32357 355 aaPredicted RBP8.47□□□□□ -1.05
SFP1YLR403W GPI16P38875 610 aa8.47□□□□□ -1.05
SFP1YLR403W CKB2P38930 258 aa8.47□□□□□ -1.05
SFP1YLR403W GDI1P39958 451 aaKnown RBP8.47□□□□□ -1.05
SFP1YLR403W AVT2P39981 480 aa8.47□□□□□ -1.05
SFP1YLR403W NPP2P39997 493 aa8.47□□□□□ -1.05
SFP1YLR403W LTP1P40347 161 aa8.47□□□□□ -1.05
SFP1YLR403W ERR3P42222 437 aa8.47□□□□□ -1.05
SFP1YLR403W PMT6P42934 759 aa8.47□□□□□ -1.05
SFP1YLR403W PFD1P46988 109 aa8.47□□□□□ -1.05
SFP1YLR403W DAN1P47178 298 aa8.47□□□□□ -1.05
SFP1YLR403W PUS6P53294 404 aa8.47□□□□□ -1.05
SFP1YLR403W YNL134CP53912 376 aaKnown RBP8.47□□□□□ -1.05
SFP1YLR403W CTS2Q06350 511 aa8.47□□□□□ -1.05
SFP1YLR403W PPM2Q08282 695 aa8.47□□□□□ -1.05
SFP1YLR403W RKI1Q12189 258 aa8.47□□□□□ -1.05
SFP1YLR403W YLL058WQ12198 575 aa8.47□□□□□ -1.05
SFP1YLR403W COX6P00427 148 aa8.46□□□□□ -1.05
SFP1YLR403W ADH3P07246 375 aaKnown RBP8.46□□□□□ -1.05
SFP1YLR403W ACO1P19414 778 aaKnown RBP RIP-Chip data8.46□□□□□ -1.05not detected
SFP1YLR403W PRE9P23638 258 aaKnown RBP8.46□□□□□ -1.05
SFP1YLR403W PET18P25362 215 aa8.46□□□□□ -1.05
SFP1YLR403W KAR4P25583 335 aa8.46□□□□□ -1.05
SFP1YLR403W GLN1P32288 370 aaKnown RBP8.46□□□□□ -1.05
Retrieved 100 of 5,963 RNA–protein pairs in 10.5 ms