RNA–Protein interactions for RNA: YLR396C

VPS33, Transcript of ATP-binding protein that is a subunit of the HOPS and CORVET complexes, yeast

Gene VPS33, Length 2,076 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS33	YLR396C	PCA1	P38360	1216 aa		3.08	□□□□□ -1.92
VPS33	YLR396C	IPI1	P38803	334 aa	Predicted RBP	3.08	□□□□□ -1.92
VPS33	YLR396C	AVT2	P39981	480 aa		3.08	□□□□□ -1.92
VPS33	YLR396C	YIL054W	P40524	105 aa		3.08	□□□□□ -1.92
VPS33	YLR396C	YKE4	P40544	346 aa		3.08	□□□□□ -1.92
VPS33	YLR396C	LCB2	P40970	561 aa		3.08	□□□□□ -1.92
VPS33	YLR396C	IRC18	P47056	224 aa		3.08	□□□□□ -1.92
VPS33	YLR396C	YDL186W	P48568	277 aa		3.08	□□□□□ -1.92
VPS33	YLR396C	BIO3	P50277	480 aa		3.08	□□□□□ -1.92
VPS33	YLR396C	YPT32	P51996	222 aa	Known RBP	3.08	□□□□□ -1.92
VPS33	YLR396C	TPN1	P53099	579 aa		3.08	□□□□□ -1.92
VPS33	YLR396C	CGR1	P53188	120 aa		3.08	□□□□□ -1.92
VPS33	YLR396C	RCF2	P53721	224 aa		3.08	□□□□□ -1.92
VPS33	YLR396C	ARK1	P53974	638 aa		3.08	□□□□□ -1.92
VPS33	YLR396C	YDR249C	Q03787	373 aa		3.08	□□□□□ -1.92
VPS33	YLR396C	RVB1	Q03940	463 aa	Known RBP	3.08	□□□□□ -1.92
VPS33	YLR396C	PRM6	Q04705	352 aa		3.08	□□□□□ -1.92
VPS33	YLR396C	YNG1	Q08465	219 aa		3.08	□□□□□ -1.92
VPS33	YLR396C	APC5	Q08683	685 aa		3.08	□□□□□ -1.92
VPS33	YLR396C	FEX1	Q08913	375 aa		3.08	□□□□□ -1.92
VPS33	YLR396C	ATG34	Q12292	412 aa		3.08	□□□□□ -1.92
VPS33	YLR396C	ATP14	Q12349	124 aa		3.08	□□□□□ -1.92
VPS33	YLR396C	STE3	P06783	470 aa		3.07	□□□□□ -1.92
VPS33	YLR396C	RPL20A	P0CX23	172 aa	Known RBP	3.07	□□□□□ -1.92
VPS33	YLR396C	RPL20B	P0CX24	172 aa	Predicted RBP	3.07	□□□□□ -1.92
VPS33	YLR396C	MET16	P18408	261 aa	Predicted RBP	3.07	□□□□□ -1.92
VPS33	YLR396C	CNB1	P25296	175 aa		3.07	□□□□□ -1.92
VPS33	YLR396C	CHA1	P25379	360 aa	Known RBP	3.07	□□□□□ -1.92
VPS33	YLR396C	ADK2	P26364	225 aa		3.07	□□□□□ -1.92
VPS33	YLR396C	KRE2	P27809	442 aa		3.07	□□□□□ -1.92
VPS33	YLR396C	UBC8	P28263	218 aa		3.07	□□□□□ -1.92
VPS33	YLR396C	NDI1	P32340	513 aa		3.07	□□□□□ -1.92
VPS33	YLR396C	PMU1	P36069	295 aa		3.07	□□□□□ -1.92
VPS33	YLR396C	CBP4	P37267	147 aa		3.07	□□□□□ -1.92
VPS33	YLR396C	GPX2	P38143	162 aa		3.07	□□□□□ -1.92
VPS33	YLR396C	RRF1	P38771	230 aa		3.07	□□□□□ -1.92
VPS33	YLR396C	YHK8	P38776	514 aa		3.07	□□□□□ -1.92
VPS33	YLR396C	GAA1	P39012	614 aa		3.07	□□□□□ -1.92
VPS33	YLR396C	TIR3	P40552	269 aa		3.07	□□□□□ -1.92
VPS33	YLR396C	AIM23	P47015	356 aa		3.07	□□□□□ -1.92
VPS33	YLR396C	HSH155	P49955	971 aa	Known RBP	3.07	□□□□□ -1.92
VPS33	YLR396C	YNL033W	P53964	284 aa		3.07	□□□□□ -1.92
VPS33	YLR396C	YNL019C	P53975	284 aa		3.07	□□□□□ -1.92
VPS33	YLR396C	MEH1	Q02205	184 aa		3.07	□□□□□ -1.92
VPS33	YLR396C	RPL6A	Q02326	176 aa	Known RBP	3.07	□□□□□ -1.92
VPS33	YLR396C	SCS7	Q03529	384 aa		3.07	□□□□□ -1.92
VPS33	YLR396C	BNA7	Q04066	261 aa		3.07	□□□□□ -1.92
VPS33	YLR396C	CSM3	Q04659	317 aa		3.07	□□□□□ -1.92
VPS33	YLR396C	GMC2	Q06201	188 aa		3.07	□□□□□ -1.92
VPS33	YLR396C	MUM3	Q08750	479 aa		3.07	□□□□□ -1.92
VPS33	YLR396C	FEX2	Q08991	375 aa		3.07	□□□□□ -1.92
VPS33	YLR396C	YDR061W	Q12298	539 aa		3.07	□□□□□ -1.92
VPS33	YLR396C	YPR1	Q12458	312 aa		3.07	□□□□□ -1.92
VPS33	YLR396C	YHR213W-A	Q8TGT4	77 aa		3.07	□□□□□ -1.92
VPS33	YLR396C	HEM2	P05373	342 aa		3.07	□□□□□ -1.92
VPS33	YLR396C	BCY1	P07278	416 aa	Known RBP	3.07	□□□□□ -1.92
VPS33	YLR396C	CAP2	P13517	287 aa		3.07	□□□□□ -1.92
VPS33	YLR396C	NSP1	P14907	823 aa	Known RBP	3.07	□□□□□ -1.92
VPS33	YLR396C	RPL24B	P24000	155 aa	Known RBP	3.07	□□□□□ -1.92
VPS33	YLR396C	ATG22	P25568	528 aa		3.07	□□□□□ -1.92
VPS33	YLR396C	SPT14	P32363	452 aa		3.07	□□□□□ -1.92
VPS33	YLR396C	YBL010C	P32788	280 aa		3.07	□□□□□ -1.92
VPS33	YLR396C	PTC1	P35182	281 aa		3.07	□□□□□ -1.92
VPS33	YLR396C	FRE2	P36033	711 aa		3.07	□□□□□ -1.92
VPS33	YLR396C	SKG1	P36169	355 aa		3.07	□□□□□ -1.92
VPS33	YLR396C	ECM8	P38246	354 aa		3.07	□□□□□ -1.92
VPS33	YLR396C	SRP72	P38688	640 aa	Known RBP	3.07	□□□□□ -1.92
VPS33	YLR396C	YHR218W	P38899	603 aa		3.07	□□□□□ -1.92
VPS33	YLR396C	FHL1	P39521	936 aa		3.07	□□□□□ -1.92
VPS33	YLR396C	ALG8	P40351	577 aa		3.07	□□□□□ -1.92
VPS33	YLR396C	SSU1	P41930	458 aa		3.07	□□□□□ -1.92
VPS33	YLR396C	MNN5	P46982	586 aa		3.07	□□□□□ -1.92
VPS33	YLR396C	RPS12	P48589	143 aa	Known RBP	3.07	□□□□□ -1.92
VPS33	YLR396C	CUS2	P53830	285 aa	Predicted RBP	3.07	□□□□□ -1.92
VPS33	YLR396C	PET117	Q02771	107 aa		3.07	□□□□□ -1.92
VPS33	YLR396C	HSP31	Q04432	237 aa		3.07	□□□□□ -1.92
VPS33	YLR396C	KAP95	Q06142	861 aa	Known RBP	3.07	□□□□□ -1.92
VPS33	YLR396C	SMF3	Q12078	473 aa	Predicted RBP	3.07	□□□□□ -1.92
VPS33	YLR396C	UBR1	P19812	1950 aa		3.06	□□□□□ -1.92
VPS33	YLR396C	RIF1	P29539	1916 aa		3.06	□□□□□ -1.92
VPS33	YLR396C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	3.06	□□□□□ -1.92	RIP-Chip
VPS33	YLR396C	UGA1	P17649	471 aa		3.06	□□□□□ -1.92
VPS33	YLR396C	MCK1	P21965	375 aa	Known RBP	3.06	□□□□□ -1.92
VPS33	YLR396C	RNA14	P25298	677 aa	Known RBP	3.06	□□□□□ -1.92
VPS33	YLR396C	GIT1	P25346	518 aa		3.06	□□□□□ -1.92
VPS33	YLR396C	CAM1	P29547	415 aa	Known RBP	3.06	□□□□□ -1.92
VPS33	YLR396C	PXA2	P34230	853 aa		3.06	□□□□□ -1.92
VPS33	YLR396C	PTK1	P36002	662 aa	Predicted RBP	3.06	□□□□□ -1.92
VPS33	YLR396C	MAK5	P38112	773 aa	Predicted RBP	3.06	□□□□□ -1.92
VPS33	YLR396C	RCY1	P39531	840 aa		3.06	□□□□□ -1.92
VPS33	YLR396C	EDC3	P39998	551 aa	Known RBP	3.06	□□□□□ -1.92
VPS33	YLR396C	YJL213W	P40896	331 aa		3.06	□□□□□ -1.92
VPS33	YLR396C	COS4	P43542	379 aa		3.06	□□□□□ -1.92
VPS33	YLR396C	LSM8	P47093	109 aa	Known RBP	3.06	□□□□□ -1.92
VPS33	YLR396C	RAD17	P48581	401 aa		3.06	□□□□□ -1.92
VPS33	YLR396C	COS1	P53822	381 aa		3.06	□□□□□ -1.92
VPS33	YLR396C	YNL095C	P53932	642 aa		3.06	□□□□□ -1.92
VPS33	YLR396C	SNZ1	Q03148	297 aa		3.06	□□□□□ -1.92
VPS33	YLR396C	ROY1	Q04847	553 aa		3.06	□□□□□ -1.92
VPS33	YLR396C	RTT103	Q05543	409 aa		3.06	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 46.8 ms