RNA–Protein interactions for RNA: YLR181C

VTA1, Transcript of Multivesicular body (MVB) protein, yeast

Gene VTA1, Length 993 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VTA1	YLR181C	FYV8	P46949	817 aa	Known RBP	4.11	□□□□□ -1.75
VTA1	YLR181C	HAL1	Q01766	294 aa		4.11	□□□□□ -1.75
VTA1	YLR181C	YOL075C	Q08234	1294 aa		4.11	□□□□□ -1.75
VTA1	YLR181C	DET1	Q99288	334 aa	Known RBP	4.11	□□□□□ -1.75
VTA1	YLR181C	CKI1	P20485	582 aa		4.1	□□□□□ -1.75
VTA1	YLR181C	IME2	P32581	645 aa		4.1	□□□□□ -1.75
VTA1	YLR181C	PFS1	P38872	237 aa		4.1	□□□□□ -1.75
VTA1	YLR181C	TIM17	P39515	158 aa		4.1	□□□□□ -1.75
VTA1	YLR181C	RRB1	Q04225	511 aa	Known RBP	4.1	□□□□□ -1.75
VTA1	YLR181C	ARR1	Q06596	294 aa		4.1	□□□□□ -1.75
VTA1	YLR181C	YDL109C	Q12103	647 aa		4.1	□□□□□ -1.75
VTA1	YLR181C	PMD1	P32634	1753 aa		4.09	□□□□□ -1.75
VTA1	YLR181C	DUR1,2	P32528	1835 aa	Known RBP	4.09	□□□□□ -1.75
VTA1	YLR181C	RNR2	P09938	399 aa	Known RBP	4.09	□□□□□ -1.75
VTA1	YLR181C	FAR1	P21268	830 aa		4.09	□□□□□ -1.75
VTA1	YLR181C	HXT2	P23585	541 aa		4.09	□□□□□ -1.75
VTA1	YLR181C	IES6	P32617	166 aa		4.09	□□□□□ -1.75
VTA1	YLR181C	UTH1	P36135	365 aa		4.09	□□□□□ -1.75
VTA1	YLR181C	YHR122W	P38829	231 aa		4.09	□□□□□ -1.75
VTA1	YLR181C	KEG1	P43614	200 aa		4.09	□□□□□ -1.75
VTA1	YLR181C	YJR030C	P47101	745 aa		4.09	□□□□□ -1.75
VTA1	YLR181C	CWC22	P53333	577 aa	Known RBP	4.09	□□□□□ -1.75
VTA1	YLR181C	HST1	P53685	503 aa		4.09	□□□□□ -1.75
VTA1	YLR181C	MSC3	Q05812	728 aa		4.09	□□□□□ -1.75
VTA1	YLR181C	DIB1	Q06819	143 aa	Predicted RBP	4.09	□□□□□ -1.75
VTA1	YLR181C	HEM4	P06174	275 aa		4.08	□□□□□ -1.76
VTA1	YLR181C	VMA2	P16140	517 aa	Known RBP	4.08	□□□□□ -1.76
VTA1	YLR181C	ZRC1	P20107	442 aa		4.08	□□□□□ -1.76
VTA1	YLR181C	TRX1	P22217	103 aa	Known RBP	4.08	□□□□□ -1.76
VTA1	YLR181C	GIT1	P25346	518 aa		4.08	□□□□□ -1.76
VTA1	YLR181C	YHC3	P47040	408 aa		4.08	□□□□□ -1.76
VTA1	YLR181C	LST7	P53237	242 aa		4.08	□□□□□ -1.76
VTA1	YLR181C	TSA2	Q04120	196 aa		4.08	□□□□□ -1.76
VTA1	YLR181C	MCT1	Q12283	360 aa		4.08	□□□□□ -1.76
VTA1	YLR181C	PRB1	P09232	635 aa		4.07	□□□□□ -1.76
VTA1	YLR181C	DEP1	P31385	405 aa		4.07	□□□□□ -1.76
VTA1	YLR181C	ZUO1	P32527	433 aa	Known RBP	4.07	□□□□□ -1.76
VTA1	YLR181C	MRPS5	P33759	307 aa		4.07	□□□□□ -1.76
VTA1	YLR181C	YPT35	P38815	214 aa	Known RBP	4.07	□□□□□ -1.76
VTA1	YLR181C	ATG7	P38862	630 aa		4.07	□□□□□ -1.76
VTA1	YLR181C	HEM14	P40012	539 aa		4.07	□□□□□ -1.76
VTA1	YLR181C	SHE4	P51534	789 aa		4.07	□□□□□ -1.76
VTA1	YLR181C	NAT4	Q04751	285 aa		4.07	□□□□□ -1.76
VTA1	YLR181C	APC5	Q08683	685 aa		4.07	□□□□□ -1.76
VTA1	YLR181C	COX4	P04037	155 aa		4.06	□□□□□ -1.76
VTA1	YLR181C	RPL23A	P0CX41	137 aa	Known RBP	4.06	□□□□□ -1.76
VTA1	YLR181C	RPL23B	P0CX42	137 aa	Known RBP	4.06	□□□□□ -1.76
VTA1	YLR181C	HSP26	P15992	214 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
VTA1	YLR181C	MXR2	P25566	168 aa		4.06	□□□□□ -1.76
VTA1	YLR181C	KRR1	P25586	316 aa	Predicted RBP	4.06	□□□□□ -1.76
VTA1	YLR181C	YKR015C	P36111	568 aa		4.06	□□□□□ -1.76
VTA1	YLR181C	ALP1	P38971	573 aa		4.06	□□□□□ -1.76
VTA1	YLR181C	RBG1	P39729	369 aa		4.06	□□□□□ -1.76
VTA1	YLR181C	ENT5	Q03769	411 aa	Known RBP	4.06	□□□□□ -1.76
VTA1	YLR181C	UBA3	Q99344	299 aa		4.06	□□□□□ -1.76
VTA1	YLR181C	STE7	P06784	515 aa		4.05	□□□□□ -1.76
VTA1	YLR181C	YLL053C	P0CD98	152 aa		4.05	□□□□□ -1.76
VTA1	YLR181C	CMK2	P22517	447 aa		4.05	□□□□□ -1.76
VTA1	YLR181C	IGD1	P43598	195 aa		4.05	□□□□□ -1.76
VTA1	YLR181C	YNL146W	P53906	100 aa		4.05	□□□□□ -1.76
VTA1	YLR181C	VAC7	P53950	1165 aa		4.05	□□□□□ -1.76
VTA1	YLR181C	PRP38	Q00723	242 aa	Predicted RBP	4.05	□□□□□ -1.76
VTA1	YLR181C	FSH2	Q05015	223 aa		4.05	□□□□□ -1.76
VTA1	YLR181C	SPH1	Q06160	661 aa		4.05	□□□□□ -1.76
VTA1	YLR181C	SFM1	Q12314	213 aa		4.05	□□□□□ -1.76
VTA1	YLR181C	ARF2	P19146	181 aa	Known RBP	4.04	□□□□□ -1.76
VTA1	YLR181C	LDS1	P31379	325 aa		4.04	□□□□□ -1.76
VTA1	YLR181C	IST2	P38250	946 aa		4.04	□□□□□ -1.76
VTA1	YLR181C	WSC4	P38739	605 aa		4.04	□□□□□ -1.76
VTA1	YLR181C	PRP39	P39682	629 aa	Known RBP	4.04	□□□□□ -1.76
VTA1	YLR181C	VPS20	Q04272	221 aa		4.04	□□□□□ -1.76
VTA1	YLR181C	ATP16	Q12165	160 aa		4.04	□□□□□ -1.76
VTA1	YLR181C	SPO24	Q3E752	67 aa		4.04	□□□□□ -1.76
VTA1	YLR181C	HKR1	P41809	1802 aa		4.04	□□□□□ -1.76
VTA1	YLR181C	SOD1	P00445	154 aa	Known RBP	4.03	□□□□□ -1.76
VTA1	YLR181C	SOL2	P37262	315 aa		4.03	□□□□□ -1.76
VTA1	YLR181C	GPI18	P38211	433 aa		4.03	□□□□□ -1.76
VTA1	YLR181C	YMR134W	P40207	237 aa		4.03	□□□□□ -1.76
VTA1	YLR181C	YGL114W	P53134	725 aa		4.03	□□□□□ -1.76
VTA1	YLR181C	MRPS16	Q02608	121 aa		4.03	□□□□□ -1.76
VTA1	YLR181C	UBX2	Q04228	584 aa		4.03	□□□□□ -1.76
VTA1	YLR181C	DNL4	Q08387	944 aa	Predicted RBP	4.03	□□□□□ -1.76
VTA1	YLR181C	RGS2	Q99188	309 aa		4.03	□□□□□ -1.76
VTA1	YLR181C	FLO1	P32768	1537 aa		4.03	□□□□□ -1.76
VTA1	YLR181C	FAS2	P19097	1887 aa	Known RBP	4.03	□□□□□ -1.77
VTA1	YLR181C	UTR1	P21373	530 aa		4.02	□□□□□ -1.77
VTA1	YLR181C	MIR1	P23641	311 aa	Known RBP	4.02	□□□□□ -1.77
VTA1	YLR181C	CIN8	P27895	1000 aa		4.02	□□□□□ -1.77
VTA1	YLR181C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.02	□□□□□ -1.77	not detected
VTA1	YLR181C	BMT2	P38278	337 aa		4.02	□□□□□ -1.77
VTA1	YLR181C	SPL2	P38839	148 aa		4.02	□□□□□ -1.77
VTA1	YLR181C	LIN1	P38852	340 aa	Predicted RBP	4.02	□□□□□ -1.77
VTA1	YLR181C	POP2	P39008	433 aa		4.02	□□□□□ -1.77
VTA1	YLR181C	ALD5	P40047	520 aa	Known RBP	4.02	□□□□□ -1.77
VTA1	YLR181C	ARP5	P53946	755 aa		4.02	□□□□□ -1.77
VTA1	YLR181C	IRC4	Q03036	179 aa		4.02	□□□□□ -1.77
VTA1	YLR181C	CSM3	Q04659	317 aa		4.02	□□□□□ -1.77
VTA1	YLR181C	INM2	Q05533	292 aa		4.02	□□□□□ -1.77
VTA1	YLR181C	GAS2	Q06135	555 aa		4.02	□□□□□ -1.77
VTA1	YLR181C	YLR177W	Q06251	628 aa		4.02	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 24.4 ms