RNA–Protein interactions for RNA: YLR115W

CFT2, Transcript of Subunit of the mRNA cleavage and polyadenlylation factor (CPF), yeastyeast

Gene CFT2, Length 2,580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CFT2YLR115W CDC33P07260 213 aaKnown RBP1.78□□□□□ -2.12
CFT2YLR115W RPL18AP0CX49 186 aaKnown RBP1.78□□□□□ -2.12
CFT2YLR115W RPL18BP0CX50 186 aaKnown RBP1.78□□□□□ -2.12
CFT2YLR115W SNA3P14359 133 aa1.78□□□□□ -2.12
CFT2YLR115W RHB1P25378 209 aa1.78□□□□□ -2.12
CFT2YLR115W ACH1P32316 526 aa1.78□□□□□ -2.12
CFT2YLR115W VMA6P32366 345 aaKnown RBP1.78□□□□□ -2.12
CFT2YLR115W FRE1P32791 686 aa1.78□□□□□ -2.12
CFT2YLR115W DBP7P36120 742 aaKnown RBP1.78□□□□□ -2.12
CFT2YLR115W ASC1P38011 319 aaKnown RBP1.78□□□□□ -2.12
CFT2YLR115W RPL32P38061 130 aaKnown RBP1.78□□□□□ -2.12
CFT2YLR115W RRN10P38204 145 aa1.78□□□□□ -2.12
CFT2YLR115W PFS1P38872 237 aa1.78□□□□□ -2.12
CFT2YLR115W SRP14P38985 146 aa1.78□□□□□ -2.12
CFT2YLR115W SEO1P39709 593 aa1.78□□□□□ -2.12
CFT2YLR115W RPH1P39956 796 aa1.78□□□□□ -2.12
CFT2YLR115W DSE1P40077 573 aa1.78□□□□□ -2.12
CFT2YLR115W BTT1P40314 149 aaPredicted RBP1.78□□□□□ -2.12
CFT2YLR115W AGE2P40529 298 aa1.78□□□□□ -2.12
CFT2YLR115W RRN9P53437 365 aa1.78□□□□□ -2.12
CFT2YLR115W BOR1P53838 576 aa1.78□□□□□ -2.12
CFT2YLR115W DUG3P53871 357 aa1.78□□□□□ -2.12
CFT2YLR115W SAM50P53969 484 aa1.78□□□□□ -2.12
CFT2YLR115W DIA1P54005 336 aa1.78□□□□□ -2.12
CFT2YLR115W YDL114WQ07530 308 aa1.78□□□□□ -2.12
CFT2YLR115W TEN1Q07921 160 aa1.78□□□□□ -2.12
CFT2YLR115W ABP140Q08641 628 aaKnown RBP1.78□□□□□ -2.12
CFT2YLR115W RUP1Q12242 671 aa1.78□□□□□ -2.12
CFT2YLR115W YLR108CQ12259 485 aa1.78□□□□□ -2.12
CFT2YLR115W YDR262WQ12331 272 aa1.78□□□□□ -2.12
CFT2YLR115W YOR012WQ12351 137 aa1.78□□□□□ -2.12
CFT2YLR115W PRP46Q12417 451 aaPredicted RBP1.78□□□□□ -2.12
CFT2YLR115W YRF1-3P0CX14 1859 aa1.77□□□□□ -2.13
CFT2YLR115W YRF1-7P0CX15 1859 aa1.77□□□□□ -2.13
CFT2YLR115W YRF1-6P53819 1859 aa1.77□□□□□ -2.13
CFT2YLR115W HTB1P02293 131 aaKnown RBP1.77□□□□□ -2.13
CFT2YLR115W HTB2P02294 131 aa1.77□□□□□ -2.13
CFT2YLR115W PAB1P04147 577 aaKnown RBP RIP-Chip data1.77□□□□□ -2.13not detected
CFT2YLR115W RPL15AP05748 204 aaKnown RBP1.77□□□□□ -2.13
CFT2YLR115W DST1P07273 309 aa1.77□□□□□ -2.13
CFT2YLR115W NFT1P0CE68 1218 aa1.77□□□□□ -2.13
CFT2YLR115W SNF3P10870 884 aa1.77□□□□□ -2.13
CFT2YLR115W AMD1P15274 810 aaKnown RBP1.77□□□□□ -2.13
CFT2YLR115W APA2P22108 325 aa1.77□□□□□ -2.13
CFT2YLR115W CTR86P25355 563 aa1.77□□□□□ -2.13
CFT2YLR115W CPR3P25719 182 aa1.77□□□□□ -2.13
CFT2YLR115W CYS4P32582 507 aaKnown RBP1.77□□□□□ -2.13
CFT2YLR115W CPR5P35176 225 aa1.77□□□□□ -2.13
CFT2YLR115W FIG1P38224 298 aa1.77□□□□□ -2.13
CFT2YLR115W MIC12P38341 106 aa1.77□□□□□ -2.13
CFT2YLR115W COX16P47081 118 aa1.77□□□□□ -2.13
CFT2YLR115W YJR030CP47101 745 aa1.77□□□□□ -2.13
CFT2YLR115W YDL186WP48568 277 aa1.77□□□□□ -2.13
CFT2YLR115W YGL108CP53139 140 aa1.77□□□□□ -2.13
CFT2YLR115W YGR042WP53227 271 aa1.77□□□□□ -2.13
CFT2YLR115W YMR087WQ04299 284 aa1.77□□□□□ -2.13
CFT2YLR115W EMI2Q04409 500 aaKnown RBP1.77□□□□□ -2.13
CFT2YLR115W YDR222WQ04925 415 aa1.77□□□□□ -2.13
CFT2YLR115W DCR2Q05924 578 aa1.77□□□□□ -2.13
CFT2YLR115W SIA1Q12212 622 aa1.77□□□□□ -2.13
CFT2YLR115W THP2O13539 261 aaKnown RBP1.77□□□□□ -2.13
CFT2YLR115W COR1P07256 457 aa1.77□□□□□ -2.13
CFT2YLR115W YBR121C-AP0C5L4 52 aa1.77□□□□□ -2.13
CFT2YLR115W TCP1P12612 559 aaKnown RBP1.77□□□□□ -2.13
CFT2YLR115W POX1P13711 748 aa1.77□□□□□ -2.13
CFT2YLR115W PUP3P25451 205 aaKnown RBP1.77□□□□□ -2.13
CFT2YLR115W FIG2P25653 1609 aa1.77□□□□□ -2.13
CFT2YLR115W PSK1P31374 1356 aa1.77□□□□□ -2.13
CFT2YLR115W VMA5P31412 392 aaKnown RBP1.77□□□□□ -2.13
CFT2YLR115W MSK1P32048 576 aa1.77□□□□□ -2.13
CFT2YLR115W YSC83P32792 385 aa1.77□□□□□ -2.13
CFT2YLR115W SSO1P32867 290 aa1.77□□□□□ -2.13
CFT2YLR115W UBC6P33296 250 aaPredicted RBP1.77□□□□□ -2.13
CFT2YLR115W DUG2P38149 878 aa1.77□□□□□ -2.13
CFT2YLR115W IML3P38265 245 aa1.77□□□□□ -2.13
CFT2YLR115W TSC10P38342 320 aa1.77□□□□□ -2.13
CFT2YLR115W HIS2P38635 335 aa1.77□□□□□ -2.13
CFT2YLR115W INM1P38710 295 aa1.77□□□□□ -2.13
CFT2YLR115W BIG1P38813 335 aa1.77□□□□□ -2.13
CFT2YLR115W ELO1P39540 310 aa1.77□□□□□ -2.13
CFT2YLR115W YER184CP39961 794 aa1.77□□□□□ -2.13
CFT2YLR115W VAB2P40003 282 aa1.77□□□□□ -2.13
CFT2YLR115W YER079WP40052 210 aaKnown RBP1.77□□□□□ -2.13
CFT2YLR115W YIA6P40556 373 aa1.77□□□□□ -2.13
CFT2YLR115W GAB1P41733 394 aa1.77□□□□□ -2.13
CFT2YLR115W SPG5P42933 373 aa1.77□□□□□ -2.13
CFT2YLR115W COS10P52924 374 aa1.77□□□□□ -2.13
CFT2YLR115W TDA7P53882 636 aaPredicted RBP1.77□□□□□ -2.13
CFT2YLR115W STD1Q02794 444 aa1.77□□□□□ -2.13
CFT2YLR115W MSS11Q03825 758 aa1.77□□□□□ -2.13
CFT2YLR115W KRE28Q04431 385 aa1.77□□□□□ -2.13
CFT2YLR115W BER1Q06688 274 aaKnown RBP1.77□□□□□ -2.13
CFT2YLR115W YDL057WQ07379 328 aa1.77□□□□□ -2.13
CFT2YLR115W YEH2Q07950 538 aa1.77□□□□□ -2.13
CFT2YLR115W RSA1Q08932 381 aa1.77□□□□□ -2.13
CFT2YLR115W ATG31Q12421 196 aa1.77□□□□□ -2.13
CFT2YLR115W PAA1Q12447 191 aaKnown RBP1.77□□□□□ -2.13
CFT2YLR115W SFG1Q12507 346 aa1.77□□□□□ -2.13
CFT2YLR115W HIS1P00498 297 aaKnown RBP1.76□□□□□ -2.13
CFT2YLR115W RPL40AP0CH08 128 aaKnown RBP1.76□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 29.8 ms