RNA–Protein interactions for RNA: YKR097W

PCK1, Transcript of Phosphoenolpyruvate carboxykinase, yeastyeast

Gene PCK1, Length 1,650 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PCK1YKR097W SMF2P38778 549 aa2.31□□□□□ -2.04
PCK1YKR097W GPI8P49018 411 aa2.31□□□□□ -2.04
PCK1YKR097W PXR1P53335 271 aaPredicted RBP2.31□□□□□ -2.04
PCK1YKR097W RMI1Q02685 241 aa2.31□□□□□ -2.04
PCK1YKR097W RVB1Q03940 463 aaKnown RBP2.31□□□□□ -2.04
PCK1YKR097W MDY2Q12285 212 aa2.31□□□□□ -2.04
PCK1YKR097W MMS22Q06164 1454 aa2.3□□□□□ -2.04
PCK1YKR097W ACB1P31787 87 aa2.3□□□□□ -2.04
PCK1YKR097W SHE3P38272 425 aaKnown RBP2.3□□□□□ -2.04
PCK1YKR097W SWC5P38326 303 aa2.3□□□□□ -2.04
PCK1YKR097W MNN9P39107 395 aaKnown RBP2.3□□□□□ -2.04
PCK1YKR097W UTP25P40498 721 aaKnown RBP2.3□□□□□ -2.04
PCK1YKR097W BIO3P50277 480 aa2.3□□□□□ -2.04
PCK1YKR097W TIM11P81449 96 aaPredicted RBP2.3□□□□□ -2.04
PCK1YKR097W TPS1Q00764 495 aaKnown RBP2.3□□□□□ -2.04
PCK1YKR097W RPL21AQ02753 160 aaKnown RBP2.3□□□□□ -2.04
PCK1YKR097W YDR115WQ04598 105 aa2.3□□□□□ -2.04
PCK1YKR097W YLR297WQ05899 129 aa2.3□□□□□ -2.04
PCK1YKR097W BUR2Q05949 395 aa2.3□□□□□ -2.04
PCK1YKR097W DDC1Q08949 612 aa2.3□□□□□ -2.04
PCK1YKR097W RPL21BQ12672 160 aaKnown RBP2.3□□□□□ -2.04
PCK1YKR097W FOL3Q12676 427 aaPredicted RBP2.3□□□□□ -2.04
PCK1YKR097W SSK2P53599 1579 aa2.3□□□□□ -2.04
PCK1YKR097W ESP1Q03018 1630 aa2.29□□□□□ -2.04
PCK1YKR097W REP1P03871 373 aa2.29□□□□□ -2.04
PCK1YKR097W GCD2P12754 651 aaPredicted RBP2.29□□□□□ -2.04
PCK1YKR097W BUD2P33314 1104 aa2.29□□□□□ -2.04
PCK1YKR097W CBF5P33322 483 aaKnown RBP RIP-Chip data2.29□□□□□ -2.04not detected
PCK1YKR097W SMP1P38128 452 aa2.29□□□□□ -2.04
PCK1YKR097W END3P39013 349 aa2.29□□□□□ -2.04
PCK1YKR097W PEX22P39718 180 aa2.29□□□□□ -2.04
PCK1YKR097W CDC40P40968 455 aaPredicted RBP2.29□□□□□ -2.04
PCK1YKR097W STB1P42845 420 aa2.29□□□□□ -2.04
PCK1YKR097W LOC1P43586 204 aaPredicted RBP2.29□□□□□ -2.04
PCK1YKR097W RIB4P50861 169 aaPredicted RBP2.29□□□□□ -2.04
PCK1YKR097W YGL262WP53054 175 aa2.29□□□□□ -2.04
PCK1YKR097W YGR168CP53293 376 aa2.29□□□□□ -2.04
PCK1YKR097W MKC7P53379 596 aa2.29□□□□□ -2.04
PCK1YKR097W RNH201P53942 307 aa2.29□□□□□ -2.04
PCK1YKR097W VTI1Q04338 217 aa2.29□□□□□ -2.04
PCK1YKR097W FAR10Q06001 478 aa2.29□□□□□ -2.04
PCK1YKR097W GGA1Q06336 557 aa2.29□□□□□ -2.04
PCK1YKR097W SIN3P22579 1536 aa2.28□□□□□ -2.04
PCK1YKR097W URA10P30402 227 aa2.28□□□□□ -2.04
PCK1YKR097W YKL162CP36052 402 aa2.28□□□□□ -2.04
PCK1YKR097W CHL4P38907 458 aa2.28□□□□□ -2.04
PCK1YKR097W SEO1P39709 593 aa2.28□□□□□ -2.04
PCK1YKR097W INA22P40576 216 aa2.28□□□□□ -2.04
PCK1YKR097W YFL040WP43562 540 aa2.28□□□□□ -2.04
PCK1YKR097W YFR018CP43599 363 aa2.28□□□□□ -2.04
PCK1YKR097W KEL2P50090 882 aa2.28□□□□□ -2.04
PCK1YKR097W DBP6P53734 629 aaKnown RBP2.28□□□□□ -2.04
PCK1YKR097W KTR6P54070 446 aa2.28□□□□□ -2.04
PCK1YKR097W BSC6Q08280 497 aa2.28□□□□□ -2.04
PCK1YKR097W RUD3Q12234 484 aaKnown RBP2.28□□□□□ -2.04
PCK1YKR097W LDB17Q12342 491 aa2.28□□□□□ -2.04
PCK1YKR097W APC2Q12440 853 aa2.28□□□□□ -2.04
PCK1YKR097W PSK1P31374 1356 aa2.28□□□□□ -2.04
PCK1YKR097W DBP3P20447 523 aaKnown RBP2.28□□□□□ -2.05
PCK1YKR097W RBK1P25332 333 aa2.28□□□□□ -2.05
PCK1YKR097W ITR2P30606 609 aa2.28□□□□□ -2.05
PCK1YKR097W HCH1P53834 153 aa2.28□□□□□ -2.05
PCK1YKR097W YNL247WP53852 767 aaKnown RBP2.28□□□□□ -2.05
PCK1YKR097W MRX11Q03079 207 aa2.28□□□□□ -2.05
PCK1YKR097W SRO7Q12038 1033 aa2.28□□□□□ -2.05
PCK1YKR097W PRM4Q12498 284 aa2.28□□□□□ -2.05
PCK1YKR097W YOL085CQ99345 113 aa2.28□□□□□ -2.05
PCK1YKR097W TAF2P23255 1407 aa2.27□□□□□ -2.05
PCK1YKR097W MYO2P19524 1574 aaKnown RBP2.27□□□□□ -2.05
PCK1YKR097W TPI1P00942 248 aaKnown RBP2.27□□□□□ -2.05
PCK1YKR097W ARC19P33204 171 aaKnown RBP2.27□□□□□ -2.05
PCK1YKR097W DED81P38707 554 aaKnown RBP2.27□□□□□ -2.05
PCK1YKR097W FET3P38993 636 aa2.27□□□□□ -2.05
PCK1YKR097W PIN3Q06449 215 aa2.27□□□□□ -2.05
PCK1YKR097W VAC14Q06708 880 aa2.27□□□□□ -2.05
PCK1YKR097W YLR012CQ07927 99 aa2.27□□□□□ -2.05
PCK1YKR097W RPN8Q08723 338 aaKnown RBP2.27□□□□□ -2.05
PCK1YKR097W SWR1Q05471 1514 aa2.27□□□□□ -2.05
PCK1YKR097W MON2P48563 1636 aaPredicted RBP2.26□□□□□ -2.05
PCK1YKR097W MEI5P32489 222 aa2.26□□□□□ -2.05
PCK1YKR097W RPC37P36121 282 aa2.26□□□□□ -2.05
PCK1YKR097W PCL7P40186 285 aa2.26□□□□□ -2.05
PCK1YKR097W TPC1P53257 314 aa2.26□□□□□ -2.05
PCK1YKR097W VOA1P53262 265 aa2.26□□□□□ -2.05
PCK1YKR097W OKP1P53298 406 aa2.26□□□□□ -2.05
PCK1YKR097W CLP1Q08685 445 aaPredicted RBP2.26□□□□□ -2.05
PCK1YKR097W RDL2Q08742 149 aaKnown RBP2.26□□□□□ -2.05
PCK1YKR097W DCP1Q12517 231 aaPredicted RBP2.26□□□□□ -2.05
PCK1YKR097W BPT1P14772 1559 aa2.26□□□□□ -2.05
PCK1YKR097W CAR2P07991 424 aaKnown RBP2.25□□□□□ -2.05
PCK1YKR097W ASP3-2P0CX77 362 aa2.25□□□□□ -2.05
PCK1YKR097W ASP3-3P0CX78 362 aa2.25□□□□□ -2.05
PCK1YKR097W ASP3-4P0CX79 362 aa2.25□□□□□ -2.05
PCK1YKR097W ASP3-1P0CZ17 362 aa2.25□□□□□ -2.05
PCK1YKR097W SAR1P20606 190 aaKnown RBP2.25□□□□□ -2.05
PCK1YKR097W KTI12P34253 313 aaKnown RBP2.25□□□□□ -2.05
PCK1YKR097W KDX1P36005 433 aa2.25□□□□□ -2.05
PCK1YKR097W MID2P36027 376 aa2.25□□□□□ -2.05
PCK1YKR097W YKL071WP36086 256 aa2.25□□□□□ -2.05
PCK1YKR097W DTR1P38125 572 aa2.25□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms