RNA–Protein interactions for RNA: YKL172W

EBP2, Transcript of Required for 25S rRNA maturation and 60S ribosomal subunit assembly, yeast

Gene EBP2, Length 1,284 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
EBP2	YKL172W	NAS6	P50086	228 aa		3.3	□□□□□ -1.88
EBP2	YKL172W	YGR067C	P53243	804 aa		3.3	□□□□□ -1.88
EBP2	YKL172W	RVB1	Q03940	463 aa	Known RBP	3.3	□□□□□ -1.88
EBP2	YKL172W	CTA1	P15202	515 aa		3.29	□□□□□ -1.88
EBP2	YKL172W	TRX1	P22217	103 aa	Known RBP	3.29	□□□□□ -1.88
EBP2	YKL172W	ACB1	P31787	87 aa		3.29	□□□□□ -1.88
EBP2	YKL172W	RAD23	P32628	398 aa	Known RBP	3.29	□□□□□ -1.88
EBP2	YKL172W	SRB2	P34162	210 aa		3.29	□□□□□ -1.88
EBP2	YKL172W	RRT13	P40042	185 aa		3.29	□□□□□ -1.88
EBP2	YKL172W	YFR018C	P43599	363 aa		3.29	□□□□□ -1.88
EBP2	YKL172W	TAF6	P53040	516 aa		3.29	□□□□□ -1.88
EBP2	YKL172W	NRM1	P53718	249 aa		3.29	□□□□□ -1.88
EBP2	YKL172W	RNY1	Q02933	434 aa	Known RBP	3.29	□□□□□ -1.88
EBP2	YKL172W	API2	Q04413	109 aa		3.29	□□□□□ -1.88
EBP2	YKL172W	RPN6	Q12377	434 aa		3.29	□□□□□ -1.88
EBP2	YKL172W	ITR2	P30606	609 aa		3.28	□□□□□ -1.88
EBP2	YKL172W	TIP20	P33891	701 aa		3.28	□□□□□ -1.88
EBP2	YKL172W	SCS7	Q03529	384 aa		3.28	□□□□□ -1.88
EBP2	YKL172W	BUR2	Q05949	395 aa		3.28	□□□□□ -1.88
EBP2	YKL172W	FAR10	Q06001	478 aa		3.28	□□□□□ -1.88
EBP2	YKL172W	SPH1	Q06160	661 aa		3.28	□□□□□ -1.88
EBP2	YKL172W	TAF10	Q12030	206 aa		3.28	□□□□□ -1.88
EBP2	YKL172W	TIR4	Q12218	487 aa	Predicted RBP	3.28	□□□□□ -1.88
EBP2	YKL172W	VPS63	O13549	108 aa		3.27	□□□□□ -1.89
EBP2	YKL172W	GAL3	P13045	520 aa		3.27	□□□□□ -1.89
EBP2	YKL172W	KRR1	P25586	316 aa	Predicted RBP	3.27	□□□□□ -1.89
EBP2	YKL172W	MEI5	P32489	222 aa		3.27	□□□□□ -1.89
EBP2	YKL172W	KTI12	P34253	313 aa	Known RBP	3.27	□□□□□ -1.89
EBP2	YKL172W	HIT1	P46973	164 aa		3.27	□□□□□ -1.89
EBP2	YKL172W	PXR1	P53335	271 aa	Predicted RBP	3.27	□□□□□ -1.89
EBP2	YKL172W	DTD1	Q07648	150 aa	Known RBP	3.27	□□□□□ -1.89
EBP2	YKL172W	YOL085C	Q99345	113 aa		3.27	□□□□□ -1.89
EBP2	YKL172W	CKA2	P19454	339 aa		3.26	□□□□□ -1.89
EBP2	YKL172W	PRM4	Q12498	284 aa		3.26	□□□□□ -1.89
EBP2	YKL172W	YAL067W-A	Q8TGK6	75 aa		3.26	□□□□□ -1.89
EBP2	YKL172W	MHP1	P43638	1398 aa		3.25	□□□□□ -1.89
EBP2	YKL172W	CDC37	P06101	506 aa	Known RBP	3.25	□□□□□ -1.89
EBP2	YKL172W	APC4	Q04601	652 aa		3.25	□□□□□ -1.89
EBP2	YKL172W	REP1	P03871	373 aa		3.24	□□□□□ -1.89
EBP2	YKL172W	PET18	P25362	215 aa		3.24	□□□□□ -1.89
EBP2	YKL172W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	3.24	□□□□□ -1.89	not detected
EBP2	YKL172W	TAE1	P38340	232 aa		3.24	□□□□□ -1.89
EBP2	YKL172W	FHL1	P39521	936 aa		3.24	□□□□□ -1.89
EBP2	YKL172W	UFE1	P41834	346 aa		3.24	□□□□□ -1.89
EBP2	YKL172W	YGR168C	P53293	376 aa		3.24	□□□□□ -1.89
EBP2	YKL172W	MRX9	Q07349	420 aa	Known RBP	3.24	□□□□□ -1.89
EBP2	YKL172W	YOL029C	Q08187	201 aa		3.24	□□□□□ -1.89
EBP2	YKL172W	SLF1	Q12034	447 aa	Known RBP	3.24	□□□□□ -1.89
EBP2	YKL172W	AUS1	Q08409	1394 aa		3.24	□□□□□ -1.89
EBP2	YKL172W	SMF2	P38778	549 aa		3.23	□□□□□ -1.89
EBP2	YKL172W	FRT2	P39734	528 aa		3.23	□□□□□ -1.89
EBP2	YKL172W	SSO2	P39926	295 aa		3.23	□□□□□ -1.89
EBP2	YKL172W	UTP25	P40498	721 aa	Known RBP	3.23	□□□□□ -1.89
EBP2	YKL172W	UTP15	Q04305	513 aa	Known RBP	3.23	□□□□□ -1.89
EBP2	YKL172W	MRX8	Q05473	314 aa		3.23	□□□□□ -1.89
EBP2	YKL172W	RDL2	Q08742	149 aa	Known RBP	3.23	□□□□□ -1.89
EBP2	YKL172W	RTC5	Q12108	567 aa	Known RBP	3.23	□□□□□ -1.89
EBP2	YKL172W	YDR018C	Q12185	396 aa		3.23	□□□□□ -1.89
EBP2	YKL172W	STF1	P01098	86 aa		3.22	□□□□□ -1.89
EBP2	YKL172W	TPS2	P31688	896 aa	Known RBP	3.22	□□□□□ -1.89
EBP2	YKL172W	YKL187C	P34231	750 aa		3.22	□□□□□ -1.89
EBP2	YKL172W	DBP7	P36120	742 aa	Known RBP	3.22	□□□□□ -1.89
EBP2	YKL172W	CTM1	P38818	585 aa		3.22	□□□□□ -1.89
EBP2	YKL172W	INA22	P40576	216 aa		3.22	□□□□□ -1.89
EBP2	YKL172W	YLR297W	Q05899	129 aa		3.22	□□□□□ -1.89
EBP2	YKL172W	YLR012C	Q07927	99 aa		3.22	□□□□□ -1.89
EBP2	YKL172W	RPL18A	P0CX49	186 aa	Known RBP	3.21	□□□□□ -1.9
EBP2	YKL172W	RPL18B	P0CX50	186 aa	Known RBP	3.21	□□□□□ -1.9
EBP2	YKL172W	FUS3	P16892	353 aa	Known RBP	3.21	□□□□□ -1.9
EBP2	YKL172W	YPS1	P32329	569 aa		3.21	□□□□□ -1.9
EBP2	YKL172W	POP2	P39008	433 aa		3.21	□□□□□ -1.9
EBP2	YKL172W	YIR035C	P40579	254 aa		3.21	□□□□□ -1.9
EBP2	YKL172W	MIC19	P43594	170 aa		3.21	□□□□□ -1.9
EBP2	YKL172W	IRC4	Q03036	179 aa		3.21	□□□□□ -1.9
EBP2	YKL172W	VPS20	Q04272	221 aa		3.21	□□□□□ -1.9
EBP2	YKL172W	VTI1	Q04338	217 aa		3.21	□□□□□ -1.9
EBP2	YKL172W	GMC1	Q04399	608 aa		3.21	□□□□□ -1.9
EBP2	YKL172W	STE23	Q06010	1027 aa		3.21	□□□□□ -1.9
EBP2	YKL172W	YPL245W	Q12179	454 aa	Known RBP	3.21	□□□□□ -1.9
EBP2	YKL172W	MSS116	P15424	664 aa	Known RBP	3.2	□□□□□ -1.9
EBP2	YKL172W	BUD2	P33314	1104 aa		3.2	□□□□□ -1.9
EBP2	YKL172W	FRM2	P37261	193 aa		3.2	□□□□□ -1.9
EBP2	YKL172W	RFT1	P38206	574 aa	Predicted RBP	3.2	□□□□□ -1.9
EBP2	YKL172W	TRR2	P38816	342 aa		3.2	□□□□□ -1.9
EBP2	YKL172W	YDR089W	P38966	869 aa		3.2	□□□□□ -1.9
EBP2	YKL172W	END3	P39013	349 aa		3.2	□□□□□ -1.9
EBP2	YKL172W	YIL054W	P40524	105 aa		3.2	□□□□□ -1.9
EBP2	YKL172W	PMT4	P46971	762 aa		3.2	□□□□□ -1.9
EBP2	YKL172W	SDS23	P53172	527 aa		3.2	□□□□□ -1.9
EBP2	YKL172W	HST4	P53688	370 aa		3.2	□□□□□ -1.9
EBP2	YKL172W	UBX2	Q04228	584 aa		3.2	□□□□□ -1.9
EBP2	YKL172W	SAL1	D6W196	494 aa		3.19	□□□□□ -1.9
EBP2	YKL172W	CBP2	P03874	630 aa	Predicted RBP	3.19	□□□□□ -1.9
EBP2	YKL172W	FMT1	P32785	401 aa		3.19	□□□□□ -1.9
EBP2	YKL172W	SUR1	P33300	382 aa		3.19	□□□□□ -1.9
EBP2	YKL172W	RCK1	P38622	512 aa		3.19	□□□□□ -1.9
EBP2	YKL172W	YHR035W	P38769	630 aa		3.19	□□□□□ -1.9
EBP2	YKL172W	AIM20	P40451	204 aa		3.19	□□□□□ -1.9
EBP2	YKL172W	TPC1	P53257	314 aa		3.19	□□□□□ -1.9
EBP2	YKL172W	PRO2	P54885	456 aa	Known RBP	3.19	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 27.7 ms