RNA–Protein interactions for RNA: YKL018W

SWD2, Transcript of Subunit of the COMPASS (Set1C) histone H3K4 methyltransferase complex, yeast

Gene SWD2, Length 990 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWD2	YKL018W	KTR6	P54070	446 aa		3.01	□□□□□ -1.93
SWD2	YKL018W	SPO19	Q03029	223 aa		3.01	□□□□□ -1.93
SWD2	YKL018W	YMR102C	Q03177	834 aa		3.01	□□□□□ -1.93
SWD2	YKL018W	RVB1	Q03940	463 aa	Known RBP	3.01	□□□□□ -1.93
SWD2	YKL018W	ECM11	Q04110	302 aa		3.01	□□□□□ -1.93
SWD2	YKL018W	DNL4	Q08387	944 aa	Predicted RBP	3.01	□□□□□ -1.93
SWD2	YKL018W	TMC1	Q08422	150 aa	Predicted RBP	3.01	□□□□□ -1.93
SWD2	YKL018W	RIO1	Q12196	484 aa	Known RBP	3.01	□□□□□ -1.93
SWD2	YKL018W	LAG2	Q92325	660 aa		3.01	□□□□□ -1.93
SWD2	YKL018W	DET1	Q99288	334 aa	Known RBP	3.01	□□□□□ -1.93
SWD2	YKL018W	RAD1	P06777	1100 aa		3	□□□□□ -1.93
SWD2	YKL018W	OSM1	P21375	501 aa	Known RBP	3	□□□□□ -1.93
SWD2	YKL018W	POP5	P28005	173 aa		3	□□□□□ -1.93
SWD2	YKL018W	VMA5	P31412	392 aa	Known RBP	3	□□□□□ -1.93
SWD2	YKL018W	HXT1	P32465	570 aa		3	□□□□□ -1.93
SWD2	YKL018W	PRS1	P32895	427 aa	Known RBP	3	□□□□□ -1.93
SWD2	YKL018W	IST2	P38250	946 aa		3	□□□□□ -1.93
SWD2	YKL018W	IML3	P38265	245 aa		3	□□□□□ -1.93
SWD2	YKL018W	PTH1	P38876	190 aa	Known RBP	3	□□□□□ -1.93
SWD2	YKL018W	HAC1	P41546	238 aa		3	□□□□□ -1.93
SWD2	YKL018W	YRB1	P41920	201 aa	Known RBP	3	□□□□□ -1.93
SWD2	YKL018W	NAS6	P50086	228 aa		3	□□□□□ -1.93
SWD2	YKL018W	CWC25	P53854	179 aa	Known RBP	3	□□□□□ -1.93
SWD2	YKL018W	ATC1	Q04005	294 aa		3	□□□□□ -1.93
SWD2	YKL018W	ERV41	Q04651	352 aa		3	□□□□□ -1.93
SWD2	YKL018W	NNT1	Q05874	261 aa		3	□□□□□ -1.93
SWD2	YKL018W	YLR173W	Q06247	608 aa		3	□□□□□ -1.93
SWD2	YKL018W	BSC6	Q08280	497 aa		3	□□□□□ -1.93
SWD2	YKL018W	PAA1	Q12447	191 aa	Known RBP	3	□□□□□ -1.93
SWD2	YKL018W	CFT1	Q06632	1357 aa	Known RBP	3	□□□□□ -1.93
SWD2	YKL018W	ARO2	P28777	376 aa	Known RBP	2.99	□□□□□ -1.93
SWD2	YKL018W	RAD23	P32628	398 aa	Known RBP	2.99	□□□□□ -1.93
SWD2	YKL018W	GDH2	P33327	1092 aa	Known RBP	2.99	□□□□□ -1.93
SWD2	YKL018W	RPC25	P35718	212 aa		2.99	□□□□□ -1.93
SWD2	YKL018W	YKR015C	P36111	568 aa		2.99	□□□□□ -1.93
SWD2	YKL018W	RFS1	P38234	210 aa	Known RBP	2.99	□□□□□ -1.93
SWD2	YKL018W	FET3	P38993	636 aa		2.99	□□□□□ -1.93
SWD2	YKL018W	FHL1	P39521	936 aa		2.99	□□□□□ -1.93
SWD2	YKL018W	PRM9	P39551	298 aa		2.99	□□□□□ -1.93
SWD2	YKL018W	EMC2	P47133	292 aa	Known RBP	2.99	□□□□□ -1.93
SWD2	YKL018W	MIG2	P53035	382 aa		2.99	□□□□□ -1.93
SWD2	YKL018W	TAF6	P53040	516 aa		2.99	□□□□□ -1.93
SWD2	YKL018W	RMR1	P53060	241 aa		2.99	□□□□□ -1.93
SWD2	YKL018W	MTM1	P53320	366 aa		2.99	□□□□□ -1.93
SWD2	YKL018W	YNL134C	P53912	376 aa	Known RBP	2.99	□□□□□ -1.93
SWD2	YKL018W	TDA1	Q03533	586 aa		2.99	□□□□□ -1.93
SWD2	YKL018W	APC4	Q04601	652 aa		2.99	□□□□□ -1.93
SWD2	YKL018W	CSM3	Q04659	317 aa		2.99	□□□□□ -1.93
SWD2	YKL018W	GTO3	Q04806	366 aa		2.99	□□□□□ -1.93
SWD2	YKL018W	FUS2	Q05670	677 aa		2.99	□□□□□ -1.93
SWD2	YKL018W	RRG7	Q08774	242 aa	Predicted RBP	2.99	□□□□□ -1.93
SWD2	YKL018W	SLF1	Q12034	447 aa	Known RBP	2.99	□□□□□ -1.93
SWD2	YKL018W	VIK1	Q12045	647 aa		2.99	□□□□□ -1.93
SWD2	YKL018W	TMS1	Q12116	473 aa		2.99	□□□□□ -1.93
SWD2	YKL018W	YGK3	Q12222	375 aa	Predicted RBP	2.99	□□□□□ -1.93
SWD2	YKL018W	YOL107W	Q12239	342 aa		2.99	□□□□□ -1.93
SWD2	YKL018W	ERV2	Q12284	196 aa		2.99	□□□□□ -1.93
SWD2	YKL018W	MMS1	Q06211	1407 aa		2.99	□□□□□ -1.93
SWD2	YKL018W	RAD7	P06779	565 aa		2.98	□□□□□ -1.93
SWD2	YKL018W	RSR1	P13856	272 aa		2.98	□□□□□ -1.93
SWD2	YKL018W	SEN2	P16658	377 aa		2.98	□□□□□ -1.93
SWD2	YKL018W	RBK1	P25332	333 aa		2.98	□□□□□ -1.93
SWD2	YKL018W	YCR016W	P25617	290 aa	Known RBP	2.98	□□□□□ -1.93
SWD2	YKL018W	RPL16A	P26784	199 aa	Known RBP	2.98	□□□□□ -1.93
SWD2	YKL018W	ICL1	P28240	557 aa	Predicted RBP	2.98	□□□□□ -1.93
SWD2	YKL018W	MKK1	P32490	508 aa		2.98	□□□□□ -1.93
SWD2	YKL018W	KAR9	P32526	644 aa		2.98	□□□□□ -1.93
SWD2	YKL018W	SPO23	P33757	523 aa		2.98	□□□□□ -1.93
SWD2	YKL018W	YPT52	P36018	234 aa	Known RBP	2.98	□□□□□ -1.93
SWD2	YKL018W	YKL070W	P36087	169 aa		2.98	□□□□□ -1.93
SWD2	YKL018W	DSE1	P40077	573 aa		2.98	□□□□□ -1.93
SWD2	YKL018W	SCC4	P40090	624 aa		2.98	□□□□□ -1.93
SWD2	YKL018W	SHQ1	P40486	507 aa	Predicted RBP	2.98	□□□□□ -1.93
SWD2	YKL018W	DFG10	P40526	253 aa		2.98	□□□□□ -1.93
SWD2	YKL018W	GTO1	P48239	356 aa		2.98	□□□□□ -1.93
SWD2	YKL018W	YGL185C	P53100	379 aa		2.98	□□□□□ -1.93
SWD2	YKL018W	MND1	P53102	219 aa		2.98	□□□□□ -1.93
SWD2	YKL018W	YGL039W	P53183	348 aa	Known RBP	2.98	□□□□□ -1.93
SWD2	YKL018W	PXR1	P53335	271 aa	Predicted RBP	2.98	□□□□□ -1.93
SWD2	YKL018W	PET117	Q02771	107 aa		2.98	□□□□□ -1.93
SWD2	YKL018W	YPR091C	Q06833	770 aa		2.98	□□□□□ -1.93
SWD2	YKL018W	CMS1	Q07897	291 aa	Known RBP	2.98	□□□□□ -1.93
SWD2	YKL018W	ABP140	Q08641	628 aa	Known RBP	2.98	□□□□□ -1.93
SWD2	YKL018W	SAM4	Q08985	325 aa	Known RBP	2.98	□□□□□ -1.93
SWD2	YKL018W	MED4	Q12343	284 aa		2.98	□□□□□ -1.93
SWD2	YKL018W	UBA3	Q99344	299 aa		2.98	□□□□□ -1.93
SWD2	YKL018W	ATG2	P53855	1592 aa		2.98	□□□□□ -1.93
SWD2	YKL018W	APA2	P22108	325 aa		2.97	□□□□□ -1.93
SWD2	YKL018W	DAL2	P25335	343 aa		2.97	□□□□□ -1.93
SWD2	YKL018W	BMH1	P29311	267 aa	Known RBP	2.97	□□□□□ -1.93
SWD2	YKL018W	ERG9	P29704	444 aa		2.97	□□□□□ -1.93
SWD2	YKL018W	ECT1	P33412	323 aa		2.97	□□□□□ -1.93
SWD2	YKL018W	TAE1	P38340	232 aa		2.97	□□□□□ -1.93
SWD2	YKL018W	YER085C	P40058	173 aa		2.97	□□□□□ -1.93
SWD2	YKL018W	YNL320W	P42840	284 aa		2.97	□□□□□ -1.93
SWD2	YKL018W	OTU1	P43558	301 aa		2.97	□□□□□ -1.93
SWD2	YKL018W	CTK3	P46963	296 aa	Predicted RBP	2.97	□□□□□ -1.93
SWD2	YKL018W	TIM21	P53220	239 aa		2.97	□□□□□ -1.93
SWD2	YKL018W	RIF2	Q06208	395 aa		2.97	□□□□□ -1.93
SWD2	YKL018W	YDL114W	Q07530	308 aa		2.97	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms