RNA–Protein interactions for RNA: YKL012W

PRP40, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP40, Length 1,752 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP40YKL012W PTH1P38876 190 aaKnown RBP4.86□□□□□ -1.63
PRP40YKL012W FHL1P39521 936 aa4.86□□□□□ -1.63
PRP40YKL012W SCC4P40090 624 aa4.86□□□□□ -1.63
PRP40YKL012W TIM11P81449 96 aaPredicted RBP4.86□□□□□ -1.63
PRP40YKL012W ELP3Q02908 557 aaKnown RBP4.86□□□□□ -1.63
PRP40YKL012W RIF2Q06208 395 aa4.86□□□□□ -1.63
PRP40YKL012W HEM4P06174 275 aa4.86□□□□□ -1.63
PRP40YKL012W RPS18AP0CX55 146 aaKnown RBP4.86□□□□□ -1.63
PRP40YKL012W RPS18BP0CX56 146 aaPredicted RBP4.86□□□□□ -1.63
PRP40YKL012W CSM1P25651 190 aa4.86□□□□□ -1.63
PRP40YKL012W ICL1P28240 557 aaPredicted RBP4.86□□□□□ -1.63
PRP40YKL012W FMP46P36141 133 aaKnown RBP4.86□□□□□ -1.63
PRP40YKL012W SPT8P38915 602 aa4.86□□□□□ -1.63
PRP40YKL012W YMR010WQ03687 405 aa4.86□□□□□ -1.63
PRP40YKL012W ATC1Q04005 294 aa4.86□□□□□ -1.63
PRP40YKL012W YDL109CQ12103 647 aa4.86□□□□□ -1.63
PRP40YKL012W TSC11P40061 1430 aa4.85□□□□□ -1.63
PRP40YKL012W SNT2P53127 1403 aa4.85□□□□□ -1.63
PRP40YKL012W TDH1P00360 332 aaKnown RBP4.85□□□□□ -1.63
PRP40YKL012W HHF1P02309 103 aaKnown RBP4.85□□□□□ -1.63
PRP40YKL012W SPR1P32603 445 aa4.85□□□□□ -1.63
PRP40YKL012W YBL059WP34224 193 aa4.85□□□□□ -1.63
PRP40YKL012W SMF2P38778 549 aa4.85□□□□□ -1.63
PRP40YKL012W KRE9P39005 276 aa4.85□□□□□ -1.63
PRP40YKL012W RCY1P39531 840 aa4.85□□□□□ -1.63
PRP40YKL012W DFG10P40526 253 aa4.85□□□□□ -1.63
PRP40YKL012W REE1P40893 198 aa4.85□□□□□ -1.63
PRP40YKL012W YFL040WP43562 540 aa4.85□□□□□ -1.63
PRP40YKL012W FMP33P46998 180 aa4.85□□□□□ -1.63
PRP40YKL012W NUP84P52891 726 aa4.85□□□□□ -1.63
PRP40YKL012W REX2P54964 269 aaKnown RBP4.85□□□□□ -1.63
PRP40YKL012W YPL080CQ02826 108 aa4.85□□□□□ -1.63
PRP40YKL012W SLM3Q12093 417 aa4.85□□□□□ -1.63
PRP40YKL012W RPA190P10964 1664 aaKnown RBP4.84□□□□□ -1.63
PRP40YKL012W RPL23AP0CX41 137 aaKnown RBP4.84□□□□□ -1.63
PRP40YKL012W RPL23BP0CX42 137 aaKnown RBP4.84□□□□□ -1.63
PRP40YKL012W UNG1P12887 359 aa4.84□□□□□ -1.63
PRP40YKL012W SPT15P13393 240 aaKnown RBP4.84□□□□□ -1.63
PRP40YKL012W DTR1P38125 572 aa4.84□□□□□ -1.63
PRP40YKL012W YNL320WP42840 284 aa4.84□□□□□ -1.63
PRP40YKL012W CLD1P53264 445 aa4.84□□□□□ -1.63
PRP40YKL012W IRC4Q03036 179 aa4.84□□□□□ -1.63
PRP40YKL012W TRM82Q03774 444 aa4.84□□□□□ -1.63
PRP40YKL012W PBP4Q07362 185 aaKnown RBP4.84□□□□□ -1.63
PRP40YKL012W IRC20Q06554 1556 aa4.84□□□□□ -1.63
PRP40YKL012W RPL24AP04449 155 aaKnown RBP4.83□□□□□ -1.64
PRP40YKL012W COT1P32798 439 aa4.83□□□□□ -1.64
PRP40YKL012W CSE2P33308 149 aa4.83□□□□□ -1.64
PRP40YKL012W HIS2P38635 335 aa4.83□□□□□ -1.64
PRP40YKL012W CTM1P38818 585 aa4.83□□□□□ -1.64
PRP40YKL012W YAT2P40017 923 aa4.83□□□□□ -1.64
PRP40YKL012W CWC22P53333 577 aaKnown RBP4.83□□□□□ -1.64
PRP40YKL012W YMR027WQ04371 470 aa4.83□□□□□ -1.64
PRP40YKL012W RNH1Q04740 348 aa4.83□□□□□ -1.64
PRP40YKL012W CMS1Q07897 291 aaKnown RBP4.83□□□□□ -1.64
PRP40YKL012W RPN6Q12377 434 aa4.83□□□□□ -1.64
PRP40YKL012W PRP46Q12417 451 aaPredicted RBP4.83□□□□□ -1.64
PRP40YKL012W NTE1Q04958 1679 aa4.83□□□□□ -1.64
PRP40YKL012W RPO21P04050 1733 aaKnown RBP4.83□□□□□ -1.64
PRP40YKL012W SAL1D6W196 494 aa4.83□□□□□ -1.64
PRP40YKL012W FRS2P15625 503 aaKnown RBP4.83□□□□□ -1.64
PRP40YKL012W RCK2P38623 610 aa4.83□□□□□ -1.64
PRP40YKL012W PTI1P39927 425 aaPredicted RBP4.83□□□□□ -1.64
PRP40YKL012W PAN6P40459 309 aa4.83□□□□□ -1.64
PRP40YKL012W AGX1P43567 385 aa4.83□□□□□ -1.64
PRP40YKL012W SEH1P53011 349 aaKnown RBP4.83□□□□□ -1.64
PRP40YKL012W YGL260WP53056 76 aa4.83□□□□□ -1.64
PRP40YKL012W SHY1P53266 389 aa4.83□□□□□ -1.64
PRP40YKL012W HRI1Q05905 244 aaKnown RBP4.83□□□□□ -1.64
PRP40YKL012W DDC1Q08949 612 aa4.83□□□□□ -1.64
PRP40YKL012W FRE8Q12209 686 aa4.83□□□□□ -1.64
PRP40YKL012W JID1Q12350 301 aa4.83□□□□□ -1.64
PRP40YKL012W YMR230W-AQ3E7B5 62 aa4.83□□□□□ -1.64
PRP40YKL012W PAN1P32521 1480 aa4.82□□□□□ -1.64
PRP40YKL012W DNF1P32660 1571 aa4.82□□□□□ -1.64
PRP40YKL012W DAL2P25335 343 aa4.82□□□□□ -1.64
PRP40YKL012W MEI5P32489 222 aa4.82□□□□□ -1.64
PRP40YKL012W IME2P32581 645 aa4.82□□□□□ -1.64
PRP40YKL012W ANR2P36090 516 aaPredicted RBP4.82□□□□□ -1.64
PRP40YKL012W YHR035WP38769 630 aa4.82□□□□□ -1.64
PRP40YKL012W KEL2P50090 882 aa4.82□□□□□ -1.64
PRP40YKL012W HCH1P53834 153 aa4.82□□□□□ -1.64
PRP40YKL012W YHC1Q05900 231 aaKnown RBP4.82□□□□□ -1.64
PRP40YKL012W MFG1Q07684 458 aa4.82□□□□□ -1.64
PRP40YKL012W FDH1Q08911 376 aa4.82□□□□□ -1.64
PRP40YKL012W YPQ1Q12010 308 aa4.82□□□□□ -1.64
PRP40YKL012W ARO2P28777 376 aaKnown RBP4.81□□□□□ -1.64
PRP40YKL012W ZRT1P32804 376 aa4.81□□□□□ -1.64
PRP40YKL012W RFS1P38234 210 aaKnown RBP4.81□□□□□ -1.64
PRP40YKL012W LSM12P38828 187 aaKnown RBP4.81□□□□□ -1.64
PRP40YKL012W EGT2P42835 1041 aa4.81□□□□□ -1.64
PRP40YKL012W YFR057WP43625 151 aa4.81□□□□□ -1.64
PRP40YKL012W BNS1P50084 137 aa4.81□□□□□ -1.64
PRP40YKL012W SPP2Q02521 185 aa4.81□□□□□ -1.64
PRP40YKL012W SWD2P36104 329 aaPredicted RBP4.81□□□□□ -1.64
PRP40YKL012W YNL208WP40159 199 aaKnown RBP4.81□□□□□ -1.64
PRP40YKL012W SLM1P40485 686 aa4.81□□□□□ -1.64
PRP40YKL012W BOR1P53838 576 aa4.81□□□□□ -1.64
PRP40YKL012W RLP24Q07915 199 aaKnown RBP4.81□□□□□ -1.64
PRP40YKL012W APC9Q12107 265 aa4.81□□□□□ -1.64
Retrieved 100 of 5,963 RNA–protein pairs in 20.5 ms