RNA–Protein interactions for RNA: YKL006C-A

SFT1, Transcript of Intra-Golgi v-SNARE, yeastyeast

Gene SFT1, Length 294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFT1YKL006C-A CMS1Q07897 291 aaKnown RBP2.52□□□□□ -2.01
SFT1YKL006C-A GAT3Q07928 141 aa2.52□□□□□ -2.01
SFT1YKL006C-A MED4Q12343 284 aa2.52□□□□□ -2.01
SFT1YKL006C-A APC2Q12440 853 aa2.52□□□□□ -2.01
SFT1YKL006C-A YOR338WQ99326 363 aa2.52□□□□□ -2.01
SFT1YKL006C-A COX4P04037 155 aa2.51□□□□□ -2.01
SFT1YKL006C-A RPL24AP04449 155 aaKnown RBP2.51□□□□□ -2.01
SFT1YKL006C-A PIS1P06197 220 aaKnown RBP2.51□□□□□ -2.01
SFT1YKL006C-A ARG80P07249 177 aa2.51□□□□□ -2.01
SFT1YKL006C-A PRB1P09232 635 aa2.51□□□□□ -2.01
SFT1YKL006C-A CAP2P13517 287 aa2.51□□□□□ -2.01
SFT1YKL006C-A CDC50P25656 391 aa2.51□□□□□ -2.01
SFT1YKL006C-A ARO4P32449 370 aaKnown RBP2.51□□□□□ -2.01
SFT1YKL006C-A DPH5P32469 300 aaPredicted RBP2.51□□□□□ -2.01
SFT1YKL006C-A MCR1P36060 302 aaKnown RBP2.51□□□□□ -2.01
SFT1YKL006C-A MRPS9P38120 278 aa2.51□□□□□ -2.01
SFT1YKL006C-A GPX2P38143 162 aa2.51□□□□□ -2.01
SFT1YKL006C-A GPI18P38211 433 aa2.51□□□□□ -2.01
SFT1YKL006C-A YMR262WP38430 313 aa2.51□□□□□ -2.01
SFT1YKL006C-A YHR045WP38775 560 aa2.51□□□□□ -2.01
SFT1YKL006C-A GCN20P43535 752 aaKnown RBP2.51□□□□□ -2.01
SFT1YKL006C-A BNS1P50084 137 aa2.51□□□□□ -2.01
SFT1YKL006C-A TIM21P53220 239 aa2.51□□□□□ -2.01
SFT1YKL006C-A LST7P53237 242 aa2.51□□□□□ -2.01
SFT1YKL006C-A SPP2Q02521 185 aa2.51□□□□□ -2.01
SFT1YKL006C-A PET117Q02771 107 aa2.51□□□□□ -2.01
SFT1YKL006C-A CTS2Q06350 511 aa2.51□□□□□ -2.01
SFT1YKL006C-A LOT6Q07923 191 aa2.51□□□□□ -2.01
SFT1YKL006C-A ADF1Q2V2Q1 113 aa2.51□□□□□ -2.01
SFT1YKL006C-A NAG1Q8TGN9 163 aa2.51□□□□□ -2.01
SFT1YKL006C-A DET1Q99288 334 aaKnown RBP2.51□□□□□ -2.01
SFT1YKL006C-A UBA3Q99344 299 aa2.51□□□□□ -2.01
SFT1YKL006C-A CFT1Q06632 1357 aaKnown RBP2.5□□□□□ -2.01
SFT1YKL006C-A SSK22P25390 1331 aaPredicted RBP2.5□□□□□ -2.01
SFT1YKL006C-A TDH3P00359 332 aaKnown RBP RIP-Chip data2.5□□□□□ -2.01not detected
SFT1YKL006C-A RAD7P06779 565 aa2.5□□□□□ -2.01
SFT1YKL006C-A ARF2P19146 181 aaKnown RBP2.5□□□□□ -2.01
SFT1YKL006C-A CSM1P25651 190 aa2.5□□□□□ -2.01
SFT1YKL006C-A ICL1P28240 557 aaPredicted RBP2.5□□□□□ -2.01
SFT1YKL006C-A DOA4P32571 926 aa2.5□□□□□ -2.01
SFT1YKL006C-A GCG1P32656 232 aaKnown RBP2.5□□□□□ -2.01
SFT1YKL006C-A TIR2P33890 251 aa2.5□□□□□ -2.01
SFT1YKL006C-A YKR015CP36111 568 aa2.5□□□□□ -2.01
SFT1YKL006C-A OM14P38325 134 aa2.5□□□□□ -2.01
SFT1YKL006C-A TIM17P39515 158 aa2.5□□□□□ -2.01
SFT1YKL006C-A YCH1P42937 148 aa2.5□□□□□ -2.01
SFT1YKL006C-A KEG1P43614 200 aa2.5□□□□□ -2.01
SFT1YKL006C-A BNA6P43619 295 aa2.5□□□□□ -2.01
SFT1YKL006C-A YJL118WP47022 219 aa2.5□□□□□ -2.01
SFT1YKL006C-A TAF6P53040 516 aa2.5□□□□□ -2.01
SFT1YKL006C-A OKP1P53298 406 aa2.5□□□□□ -2.01
SFT1YKL006C-A PXR1P53335 271 aaPredicted RBP2.5□□□□□ -2.01
SFT1YKL006C-A SRL4Q03085 281 aa2.5□□□□□ -2.01
SFT1YKL006C-A CSM3Q04659 317 aa2.5□□□□□ -2.01
SFT1YKL006C-A GPN3Q06543 272 aa2.5□□□□□ -2.01
SFT1YKL006C-A ALE1Q08548 619 aa2.5□□□□□ -2.01
SFT1YKL006C-A COX2P00410 251 aa2.49□□□□□ -2.01
SFT1YKL006C-A MSF1P08425 469 aa2.49□□□□□ -2.01
SFT1YKL006C-A POL30P15873 258 aaKnown RBP2.49□□□□□ -2.01
SFT1YKL006C-A RPB4P20433 221 aaPredicted RBP2.49□□□□□ -2.01
SFT1YKL006C-A ERG9P29704 444 aa2.49□□□□□ -2.01
SFT1YKL006C-A VMA5P31412 392 aaKnown RBP2.49□□□□□ -2.01
SFT1YKL006C-A BMH2P34730 273 aaKnown RBP2.49□□□□□ -2.01
SFT1YKL006C-A DTR1P38125 572 aa2.49□□□□□ -2.01
SFT1YKL006C-A GEP4P38812 185 aa2.49□□□□□ -2.01
SFT1YKL006C-A RTR1P40084 226 aaPredicted RBP2.49□□□□□ -2.01
SFT1YKL006C-A SLM1P40485 686 aa2.49□□□□□ -2.01
SFT1YKL006C-A ATG18P43601 500 aa2.49□□□□□ -2.01
SFT1YKL006C-A YAR1P46683 200 aa2.49□□□□□ -2.01
SFT1YKL006C-A COX16P47081 118 aa2.49□□□□□ -2.01
SFT1YKL006C-A CLD1P53264 445 aa2.49□□□□□ -2.01
SFT1YKL006C-A TDA1Q03533 586 aa2.49□□□□□ -2.01
SFT1YKL006C-A INP2Q03824 705 aa2.49□□□□□ -2.01
SFT1YKL006C-A MCH1Q07376 486 aa2.49□□□□□ -2.01
SFT1YKL006C-A SAM4Q08985 325 aaKnown RBP2.49□□□□□ -2.01
SFT1YKL006C-A SIA1Q12212 622 aa2.49□□□□□ -2.01
SFT1YKL006C-A HTZ1Q12692 134 aaKnown RBP2.49□□□□□ -2.01
SFT1YKL006C-A QCR6P00127 147 aa2.48□□□□□ -2.01
SFT1YKL006C-A DCC1P25559 380 aa2.48□□□□□ -2.01
SFT1YKL006C-A CWP1P28319 239 aa2.48□□□□□ -2.01
SFT1YKL006C-A ACB1P31787 87 aa2.48□□□□□ -2.01
SFT1YKL006C-A MKK1P32490 508 aa2.48□□□□□ -2.01
SFT1YKL006C-A SUA5P32579 426 aa2.48□□□□□ -2.01
SFT1YKL006C-A SKI2P35207 1287 aaKnown RBP RIP-Chip data2.48□□□□□ -2.01not detected
SFT1YKL006C-A COS9P36034 407 aa2.48□□□□□ -2.01
SFT1YKL006C-A HIS2P38635 335 aa2.48□□□□□ -2.01
SFT1YKL006C-A YHK8P38776 514 aa2.48□□□□□ -2.01
SFT1YKL006C-A YHR182WP38870 785 aa2.48□□□□□ -2.01
SFT1YKL006C-A PRM9P39551 298 aa2.48□□□□□ -2.01
SFT1YKL006C-A RBG1P39729 369 aa2.48□□□□□ -2.01
SFT1YKL006C-A YER085CP40058 173 aa2.48□□□□□ -2.01
SFT1YKL006C-A FMC1P40491 155 aa2.48□□□□□ -2.01
SFT1YKL006C-A MSS2P40990 351 aa2.48□□□□□ -2.01
SFT1YKL006C-A YFL040WP43562 540 aa2.48□□□□□ -2.01
SFT1YKL006C-A KAP114P53067 1004 aa2.48□□□□□ -2.01
SFT1YKL006C-A KTR6P54070 446 aa2.48□□□□□ -2.01
SFT1YKL006C-A YPL080CQ02826 108 aa2.48□□□□□ -2.01
SFT1YKL006C-A GMC2Q06201 188 aa2.48□□□□□ -2.01
SFT1YKL006C-A APC9Q12107 265 aa2.48□□□□□ -2.01
SFT1YKL006C-A GIS3Q12418 502 aa2.48□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 19.8 ms