RNA–Protein interactions for RNA: YGR271C-A

EFG1, Essential protein required for maturation of 18S rRNA, yeastyeast

Gene EFG1, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EFG1YGR271C-A PPA2P28239 310 aa2.81□□□□□ -1.96
EFG1YGR271C-A ITR1P30605 584 aa2.81□□□□□ -1.96
EFG1YGR271C-A VMA5P31412 392 aaKnown RBP2.81□□□□□ -1.96
EFG1YGR271C-A KAR9P32526 644 aa2.81□□□□□ -1.96
EFG1YGR271C-A SKN1P33336 771 aa2.81□□□□□ -1.96
EFG1YGR271C-A DOA1P36037 715 aa2.81□□□□□ -1.96
EFG1YGR271C-A YKL162CP36052 402 aa2.81□□□□□ -1.96
EFG1YGR271C-A RIB5P38145 238 aa2.81□□□□□ -1.96
EFG1YGR271C-A HIS2P38635 335 aa2.81□□□□□ -1.96
EFG1YGR271C-A DSE1P40077 573 aa2.81□□□□□ -1.96
EFG1YGR271C-A COX16P47081 118 aa2.81□□□□□ -1.96
EFG1YGR271C-A YIP1P53039 248 aa2.81□□□□□ -1.96
EFG1YGR271C-A MRPL50P53724 139 aa2.81□□□□□ -1.96
EFG1YGR271C-A GPI15P53961 229 aa2.81□□□□□ -1.96
EFG1YGR271C-A REX2P54964 269 aaKnown RBP2.81□□□□□ -1.96
EFG1YGR271C-A ENT5Q03769 411 aaKnown RBP2.81□□□□□ -1.96
EFG1YGR271C-A RVB1Q03940 463 aaKnown RBP2.81□□□□□ -1.96
EFG1YGR271C-A MYO5Q04439 1219 aaKnown RBP2.81□□□□□ -1.96
EFG1YGR271C-A REX4Q08237 289 aa2.81□□□□□ -1.96
EFG1YGR271C-A YOR029WQ12243 111 aa2.81□□□□□ -1.96
EFG1YGR271C-A TRP1P00912 224 aa2.8□□□□□ -1.96
EFG1YGR271C-A MATALPHA1P0CY06 175 aa2.8□□□□□ -1.96
EFG1YGR271C-A HMLALPHA1P0CY07 175 aa2.8□□□□□ -1.96
EFG1YGR271C-A MET16P18408 261 aaPredicted RBP2.8□□□□□ -1.96
EFG1YGR271C-A ZRC1P20107 442 aa2.8□□□□□ -1.96
EFG1YGR271C-A RPL24BP24000 155 aaKnown RBP2.8□□□□□ -1.96
EFG1YGR271C-A MXR2P25566 168 aa2.8□□□□□ -1.96
EFG1YGR271C-A RPS5P26783 225 aaKnown RBP2.8□□□□□ -1.96
EFG1YGR271C-A MNS1P32906 549 aa2.8□□□□□ -1.96
EFG1YGR271C-A VAM7P32912 316 aa2.8□□□□□ -1.96
EFG1YGR271C-A PRS4P38063 326 aaPredicted RBP2.8□□□□□ -1.96
EFG1YGR271C-A RFC4P40339 323 aaKnown RBP2.8□□□□□ -1.96
EFG1YGR271C-A GAB1P41733 394 aa2.8□□□□□ -1.96
EFG1YGR271C-A HIT1P46973 164 aa2.8□□□□□ -1.96
EFG1YGR271C-A HSH155P49955 971 aaKnown RBP2.8□□□□□ -1.96
EFG1YGR271C-A BIO4P53630 237 aa2.8□□□□□ -1.96
EFG1YGR271C-A CUS2P53830 285 aaPredicted RBP2.8□□□□□ -1.96
EFG1YGR271C-A YNL247WP53852 767 aaKnown RBP2.8□□□□□ -1.96
EFG1YGR271C-A NOP13P53883 403 aaKnown RBP RIP-Chip data2.8□□□□□ -1.96not detected
EFG1YGR271C-A YMR226CQ05016 267 aaKnown RBP2.8□□□□□ -1.96
EFG1YGR271C-A SDO1Q07953 250 aaKnown RBP2.8□□□□□ -1.96
EFG1YGR271C-A MUM3Q08750 479 aa2.8□□□□□ -1.96
EFG1YGR271C-A SAM4Q08985 325 aaKnown RBP2.8□□□□□ -1.96
EFG1YGR271C-A LAG2Q92325 660 aa2.8□□□□□ -1.96
EFG1YGR271C-A DAL82P21705 255 aa2.79□□□□□ -1.96
EFG1YGR271C-A MRPL8P22353 238 aa2.79□□□□□ -1.96
EFG1YGR271C-A COX13P32799 129 aa2.79□□□□□ -1.96
EFG1YGR271C-A MRPS5P33759 307 aa2.79□□□□□ -1.96
EFG1YGR271C-A MYO3P36006 1272 aa2.79□□□□□ -1.96
EFG1YGR271C-A MID2P36027 376 aa2.79□□□□□ -1.96
EFG1YGR271C-A BIG1P38813 335 aa2.79□□□□□ -1.96
EFG1YGR271C-A GLG2P47011 380 aa2.79□□□□□ -1.96
EFG1YGR271C-A HMS2P47175 358 aa2.79□□□□□ -1.96
EFG1YGR271C-A TAF6P53040 516 aa2.79□□□□□ -1.96
EFG1YGR271C-A LIF1P53150 421 aa2.79□□□□□ -1.96
EFG1YGR271C-A CWC25P53854 179 aaKnown RBP2.79□□□□□ -1.96
EFG1YGR271C-A YMR209CQ03648 457 aa2.79□□□□□ -1.96
EFG1YGR271C-A KRE28Q04431 385 aa2.79□□□□□ -1.96
EFG1YGR271C-A NAT4Q04751 285 aa2.79□□□□□ -1.96
EFG1YGR271C-A ADH6Q04894 360 aaKnown RBP2.79□□□□□ -1.96
EFG1YGR271C-A BER1Q06688 274 aaKnown RBP2.79□□□□□ -1.96
EFG1YGR271C-A ASA1Q06822 443 aa2.79□□□□□ -1.96
EFG1YGR271C-A CMS1Q07897 291 aaKnown RBP2.79□□□□□ -1.96
EFG1YGR271C-A SKI7Q08491 747 aaPredicted RBP2.79□□□□□ -1.96
EFG1YGR271C-A TIM18Q08749 192 aa2.79□□□□□ -1.96
EFG1YGR271C-A NCB2Q92317 146 aa2.79□□□□□ -1.96
EFG1YGR271C-A TPK3P05986 398 aa2.78□□□□□ -1.96
EFG1YGR271C-A ARF2P19146 181 aaKnown RBP2.78□□□□□ -1.96
EFG1YGR271C-A VPS1P21576 704 aaKnown RBP2.78□□□□□ -1.96
EFG1YGR271C-A ACB1P31787 87 aa2.78□□□□□ -1.96
EFG1YGR271C-A ZUO1P32527 433 aaKnown RBP2.78□□□□□ -1.96
EFG1YGR271C-A TOA2P32774 122 aa2.78□□□□□ -1.96
EFG1YGR271C-A SKT5P34226 696 aa2.78□□□□□ -1.96
EFG1YGR271C-A YBR056WP38081 501 aa2.78□□□□□ -1.96
EFG1YGR271C-A LDB7P38210 180 aa2.78□□□□□ -1.96
EFG1YGR271C-A PFS1P38872 237 aa2.78□□□□□ -1.96
EFG1YGR271C-A EGD2P38879 174 aaKnown RBP2.78□□□□□ -1.96
EFG1YGR271C-A YRB1P41920 201 aaKnown RBP2.78□□□□□ -1.96
EFG1YGR271C-A AGP3P43548 558 aa2.78□□□□□ -1.96
EFG1YGR271C-A NAS6P50086 228 aa2.78□□□□□ -1.96
EFG1YGR271C-A RMR1P53060 241 aa2.78□□□□□ -1.96
EFG1YGR271C-A PCP1P53259 346 aa2.78□□□□□ -1.96
EFG1YGR271C-A MKC7P53379 596 aa2.78□□□□□ -1.96
EFG1YGR271C-A ALG11P53954 548 aaKnown RBP2.78□□□□□ -1.96
EFG1YGR271C-A LOT6Q07923 191 aa2.78□□□□□ -1.96
EFG1YGR271C-A SGT1Q08446 395 aa2.78□□□□□ -1.96
EFG1YGR271C-A SRO7Q12038 1033 aa2.78□□□□□ -1.96
EFG1YGR271C-A CYC3P06182 269 aa2.77□□□□□ -1.97
EFG1YGR271C-A RHO1P06780 209 aaKnown RBP2.77□□□□□ -1.97
EFG1YGR271C-A ATP1P07251 545 aaKnown RBP2.77□□□□□ -1.97
EFG1YGR271C-A CDC33P07260 213 aaKnown RBP2.77□□□□□ -1.97
EFG1YGR271C-A MRP1P10662 321 aaKnown RBP2.77□□□□□ -1.97
EFG1YGR271C-A UTR1P21373 530 aa2.77□□□□□ -1.97
EFG1YGR271C-A APA2P22108 325 aa2.77□□□□□ -1.97
EFG1YGR271C-A POP5P28005 173 aa2.77□□□□□ -1.97
EFG1YGR271C-A VMA6P32366 345 aaKnown RBP2.77□□□□□ -1.97
EFG1YGR271C-A NUP2P32499 720 aa2.77□□□□□ -1.97
EFG1YGR271C-A MRPL10P36520 322 aa2.77□□□□□ -1.97
EFG1YGR271C-A LYS1P38998 373 aaRIP-Chip data2.77□□□□□ -1.97not detected
EFG1YGR271C-A FHL1P39521 936 aa2.77□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 23.8 ms