RNA–Protein interactions for RNA: YER096W

SHC1, Transcript of Sporulation-specific activator of Chs3p (chitin synthase III), yeastyeast

Gene SHC1, Length 1,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHC1YER096W BTS1Q12051 335 aa7.1□□□□□ -1.27
SHC1YER096W YDL177CQ12257 170 aa7.1□□□□□ -1.27
SHC1YER096W YGR161W-CQ3E744 92 aa7.1□□□□□ -1.27
SHC1YER096W PRP28P23394 588 aa7.09□□□□□ -1.27
SHC1YER096W RPL24BP24000 155 aaKnown RBP7.09□□□□□ -1.27
SHC1YER096W SEF1P34228 1148 aa7.09□□□□□ -1.27
SHC1YER096W JEN1P36035 616 aa7.09□□□□□ -1.27
SHC1YER096W SHE1P38200 338 aa7.09□□□□□ -1.27
SHC1YER096W YHR035WP38769 630 aa7.09□□□□□ -1.27
SHC1YER096W PCL6P40038 420 aa7.09□□□□□ -1.27
SHC1YER096W SHR5P41912 237 aa7.09□□□□□ -1.27
SHC1YER096W PAM16P42949 149 aa7.09□□□□□ -1.27
SHC1YER096W RBL2P48606 106 aaKnown RBP7.09□□□□□ -1.27
SHC1YER096W RRN9P53437 365 aa7.09□□□□□ -1.27
SHC1YER096W SNO4Q04902 237 aa7.09□□□□□ -1.27
SHC1YER096W SNT309Q06091 175 aaPredicted RBP7.09□□□□□ -1.27
SHC1YER096W YPR127WQ06494 345 aa7.09□□□□□ -1.27
SHC1YER096W HRT1Q08273 121 aa7.09□□□□□ -1.27
SHC1YER096W YOR376WQ08900 122 aa7.09□□□□□ -1.27
SHC1YER096W HSP33Q08914 237 aaKnown RBP7.09□□□□□ -1.27
SHC1YER096W HSP32Q08992 237 aa7.09□□□□□ -1.27
SHC1YER096W REX3Q12090 404 aa7.09□□□□□ -1.27
SHC1YER096W APC2Q12440 853 aa7.09□□□□□ -1.27
SHC1YER096W KIN28P06242 306 aa7.08□□□□□ -1.28
SHC1YER096W RPB8P20436 146 aa7.08□□□□□ -1.28
SHC1YER096W SNC1P31109 117 aa7.08□□□□□ -1.28
SHC1YER096W NUD1P32336 851 aa7.08□□□□□ -1.28
SHC1YER096W NTA1P40354 457 aa7.08□□□□□ -1.28
SHC1YER096W OCA1P50946 238 aaPredicted RBP7.08□□□□□ -1.28
SHC1YER096W YGL101WP53144 215 aa7.08□□□□□ -1.28
SHC1YER096W GPI17Q04080 534 aa7.08□□□□□ -1.28
SHC1YER096W MGR3Q04472 501 aa7.08□□□□□ -1.28
SHC1YER096W TAZ1Q06510 381 aa7.08□□□□□ -1.28
SHC1YER096W HDA2Q06629 674 aa7.08□□□□□ -1.28
SHC1YER096W YDL114WQ07530 308 aa7.08□□□□□ -1.28
SHC1YER096W ENB1Q08299 606 aa7.08□□□□□ -1.28
SHC1YER096W MCP1Q12106 302 aa7.08□□□□□ -1.28
SHC1YER096W YRA1Q12159 226 aaKnown RBP7.08□□□□□ -1.28
SHC1YER096W PAR32Q12515 295 aaKnown RBP7.08□□□□□ -1.28
SHC1YER096W CYT1P07143 309 aa7.07□□□□□ -1.28
SHC1YER096W NAR1P23503 491 aaKnown RBP7.07□□□□□ -1.28
SHC1YER096W SUR1P33300 382 aa7.07□□□□□ -1.28
SHC1YER096W LST4P34239 828 aa7.07□□□□□ -1.28
SHC1YER096W TPO5P36029 618 aa7.07□□□□□ -1.28
SHC1YER096W GPX2P38143 162 aa7.07□□□□□ -1.28
SHC1YER096W YIL166CP40445 542 aa7.07□□□□□ -1.28
SHC1YER096W YJL218WP40892 196 aaKnown RBP7.07□□□□□ -1.28
SHC1YER096W PPT1P53043 513 aa7.07□□□□□ -1.28
SHC1YER096W RHO5P53879 331 aaKnown RBP7.07□□□□□ -1.28
SHC1YER096W YPQ2Q06328 317 aa7.07□□□□□ -1.28
SHC1YER096W AKR2Q12013 749 aa7.07□□□□□ -1.28
SHC1YER096W THP3Q12049 470 aaKnown RBP7.07□□□□□ -1.28
SHC1YER096W ACF2Q12168 779 aa7.07□□□□□ -1.28
SHC1YER096W MDH3P32419 343 aaKnown RBP RIP-Chip data7.06□□□□□ -1.28not detected
SHC1YER096W ALG3P38179 458 aa7.06□□□□□ -1.28
SHC1YER096W UBS1P38290 277 aa7.06□□□□□ -1.28
SHC1YER096W YHR180WP38868 163 aa7.06□□□□□ -1.28
SHC1YER096W MKC7P53379 596 aa7.06□□□□□ -1.28
SHC1YER096W MPP6P53725 186 aaPredicted RBP7.06□□□□□ -1.28
SHC1YER096W CPR8P53728 308 aa7.06□□□□□ -1.28
SHC1YER096W CUZ1P53899 274 aa7.06□□□□□ -1.28
SHC1YER096W MDM30Q05930 598 aa7.06□□□□□ -1.28
SHC1YER096W RRP9Q06506 573 aaKnown RBP7.06□□□□□ -1.28
SHC1YER096W BRE4Q07660 1125 aa7.06□□□□□ -1.28
SHC1YER096W RRG7Q08774 242 aaPredicted RBP7.06□□□□□ -1.28
SHC1YER096W YDL109CQ12103 647 aa7.06□□□□□ -1.28
SHC1YER096W HAP4P14064 554 aa7.06□□□□□ -1.28
SHC1YER096W CTA1P15202 515 aa7.06□□□□□ -1.28
SHC1YER096W PHO80P20052 293 aa7.06□□□□□ -1.28
SHC1YER096W FPS1P23900 669 aa7.06□□□□□ -1.28
SHC1YER096W CLB2P24869 491 aa7.06□□□□□ -1.28
SHC1YER096W YKL071WP36086 256 aa7.06□□□□□ -1.28
SHC1YER096W MAL32P38158 584 aa7.06□□□□□ -1.28
SHC1YER096W NVJ1P38881 321 aa7.06□□□□□ -1.28
SHC1YER096W DDI1P40087 428 aa7.06□□□□□ -1.28
SHC1YER096W YIL067CP40514 678 aa7.06□□□□□ -1.28
SHC1YER096W PFS2P42841 465 aaKnown RBP7.06□□□□□ -1.28
SHC1YER096W COS10P52924 374 aa7.06□□□□□ -1.28
SHC1YER096W MAL12P53341 584 aa7.06□□□□□ -1.28
SHC1YER096W FDC1Q03034 503 aa7.06□□□□□ -1.28
SHC1YER096W SRL4Q03085 281 aa7.06□□□□□ -1.28
SHC1YER096W RLM1Q12224 676 aa7.06□□□□□ -1.28
SHC1YER096W PCL9Q12477 304 aa7.06□□□□□ -1.28
SHC1YER096W REP1P03871 373 aa7.05□□□□□ -1.28
SHC1YER096W GAS1P22146 559 aaKnown RBP7.05□□□□□ -1.28
SHC1YER096W SCO1P23833 295 aa7.05□□□□□ -1.28
SHC1YER096W GIT1P25346 518 aa7.05□□□□□ -1.28
SHC1YER096W PAD1P33751 242 aaKnown RBP RIP-Chip data7.05□□□□□ -1.28not detected
SHC1YER096W NIC96P34077 839 aa7.05□□□□□ -1.28
SHC1YER096W AMN1P38285 549 aaPredicted RBP7.05□□□□□ -1.28
SHC1YER096W OM14P38325 134 aa7.05□□□□□ -1.28
SHC1YER096W NAB3P38996 802 aaKnown RBP RIP-Chip data7.05□□□□□ -1.28not detected
SHC1YER096W YJL193WP39542 402 aa7.05□□□□□ -1.28
SHC1YER096W JLP2P40206 208 aa7.05□□□□□ -1.28
SHC1YER096W YTA6P40328 754 aa7.05□□□□□ -1.28
SHC1YER096W FMC1P40491 155 aa7.05□□□□□ -1.28
SHC1YER096W RPE1P46969 238 aa7.05□□□□□ -1.28
SHC1YER096W CWC23P52868 283 aaPredicted RBP7.05□□□□□ -1.28
SHC1YER096W GIS1Q03833 894 aa7.05□□□□□ -1.28
SHC1YER096W SNX41Q04053 625 aa7.05□□□□□ -1.28
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms