RNA–Protein interactions for RNA: YDR515W

SLF1, Transcript of RNA binding protein that associates with polysomes, yeastyeast

Gene SLF1, Length 1,344 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLF1YDR515W LSB1P53281 241 aa2.45□□□□□ -2.02
SLF1YDR515W RET3P53600 189 aa2.45□□□□□ -2.02
SLF1YDR515W ERV41Q04651 352 aa2.45□□□□□ -2.02
SLF1YDR515W BUR2Q05949 395 aa2.45□□□□□ -2.02
SLF1YDR515W GAT3Q07928 141 aa2.45□□□□□ -2.02
SLF1YDR515W YDR262WQ12331 272 aa2.45□□□□□ -2.02
SLF1YDR515W LDB17Q12342 491 aa2.45□□□□□ -2.02
SLF1YDR515W RAX2Q12465 1220 aa2.45□□□□□ -2.02
SLF1YDR515W DCP1Q12517 231 aaPredicted RBP2.45□□□□□ -2.02
SLF1YDR515W SSA3P09435 649 aaKnown RBP2.44□□□□□ -2.02
SLF1YDR515W RPS16AP0CX51 143 aaKnown RBP2.44□□□□□ -2.02
SLF1YDR515W RPS16BP0CX52 143 aaKnown RBP2.44□□□□□ -2.02
SLF1YDR515W MAS2P11914 482 aa2.44□□□□□ -2.02
SLF1YDR515W SAR1P20606 190 aaKnown RBP2.44□□□□□ -2.02
SLF1YDR515W FET3P38993 636 aa2.44□□□□□ -2.02
SLF1YDR515W SCC4P40090 624 aa2.44□□□□□ -2.02
SLF1YDR515W LYS12P40495 371 aaKnown RBP2.44□□□□□ -2.02
SLF1YDR515W YNL050CP53952 270 aa2.44□□□□□ -2.02
SLF1YDR515W RPL21AQ02753 160 aaKnown RBP2.44□□□□□ -2.02
SLF1YDR515W ATC1Q04005 294 aa2.44□□□□□ -2.02
SLF1YDR515W YLR177WQ06251 628 aa2.44□□□□□ -2.02
SLF1YDR515W APC5Q08683 685 aa2.44□□□□□ -2.02
SLF1YDR515W HMS1Q12398 434 aa2.44□□□□□ -2.02
SLF1YDR515W FMP16Q12497 93 aa2.44□□□□□ -2.02
SLF1YDR515W RPL21BQ12672 160 aaKnown RBP2.44□□□□□ -2.02
SLF1YDR515W TPI1P00942 248 aaKnown RBP2.43□□□□□ -2.02
SLF1YDR515W MXR2P25566 168 aa2.43□□□□□ -2.02
SLF1YDR515W ICL1P28240 557 aaPredicted RBP2.43□□□□□ -2.02
SLF1YDR515W MYO3P36006 1272 aa2.43□□□□□ -2.02
SLF1YDR515W DTR1P38125 572 aa2.43□□□□□ -2.02
SLF1YDR515W WSC4P38739 605 aa2.43□□□□□ -2.02
SLF1YDR515W BFR1P38934 470 aaKnown RBP RIP-Chip data2.43□□□□□ -2.02not detected
SLF1YDR515W PEX22P39718 180 aa2.43□□□□□ -2.02
SLF1YDR515W DSE1P40077 573 aa2.43□□□□□ -2.02
SLF1YDR515W SEC9P40357 651 aa2.43□□□□□ -2.02
SLF1YDR515W LIA1P47120 325 aaKnown RBP2.43□□□□□ -2.02
SLF1YDR515W YGR168CP53293 376 aa2.43□□□□□ -2.02
SLF1YDR515W YNL134CP53912 376 aaKnown RBP2.43□□□□□ -2.02
SLF1YDR515W YOR376WQ08900 122 aa2.43□□□□□ -2.02
SLF1YDR515W APC2Q12440 853 aa2.43□□□□□ -2.02
SLF1YDR515W YOR338WQ99326 363 aa2.43□□□□□ -2.02
SLF1YDR515W HEM4P06174 275 aa2.42□□□□□ -2.02
SLF1YDR515W MRPL8P22353 238 aa2.42□□□□□ -2.02
SLF1YDR515W CSM1P25651 190 aa2.42□□□□□ -2.02
SLF1YDR515W RPL16AP26784 199 aaKnown RBP2.42□□□□□ -2.02
SLF1YDR515W COY1P34237 679 aa2.42□□□□□ -2.02
SLF1YDR515W RPC25P35718 212 aa2.42□□□□□ -2.02
SLF1YDR515W ATG7P38862 630 aa2.42□□□□□ -2.02
SLF1YDR515W LCP5P40079 357 aaPredicted RBP2.42□□□□□ -2.02
SLF1YDR515W YFL012WP43580 148 aa2.42□□□□□ -2.02
SLF1YDR515W CWC21Q03375 135 aaKnown RBP2.42□□□□□ -2.02
SLF1YDR515W YDR115WQ04598 105 aa2.42□□□□□ -2.02
SLF1YDR515W APC4Q04601 652 aa2.42□□□□□ -2.02
SLF1YDR515W YDL109CQ12103 647 aa2.42□□□□□ -2.02
SLF1YDR515W ATP16Q12165 160 aa2.42□□□□□ -2.02
SLF1YDR515W YPR1Q12458 312 aa2.42□□□□□ -2.02
SLF1YDR515W RGS2Q99188 309 aa2.42□□□□□ -2.02
SLF1YDR515W RSR1P13856 272 aa2.42□□□□□ -2.02
SLF1YDR515W UTR1P21373 530 aa2.42□□□□□ -2.02
SLF1YDR515W GPI12P23797 304 aa2.42□□□□□ -2.02
SLF1YDR515W NTG1P31378 399 aa2.42□□□□□ -2.02
SLF1YDR515W LDS1P31379 325 aa2.42□□□□□ -2.02
SLF1YDR515W PDC2P32896 925 aa2.42□□□□□ -2.02
SLF1YDR515W MRPS5P33759 307 aa2.42□□□□□ -2.02
SLF1YDR515W YKL162CP36052 402 aa2.42□□□□□ -2.02
SLF1YDR515W IML3P38265 245 aa2.42□□□□□ -2.02
SLF1YDR515W YMR262WP38430 313 aa2.42□□□□□ -2.02
SLF1YDR515W RCY1P39531 840 aa2.42□□□□□ -2.02
SLF1YDR515W UTP25P40498 721 aaKnown RBP2.42□□□□□ -2.02
SLF1YDR515W YJL118WP47022 219 aa2.42□□□□□ -2.02
SLF1YDR515W NAS6P50086 228 aa2.42□□□□□ -2.02
SLF1YDR515W YNL260CP53846 198 aa2.42□□□□□ -2.02
SLF1YDR515W YMR010WQ03687 405 aa2.42□□□□□ -2.02
SLF1YDR515W NAT4Q04751 285 aa2.42□□□□□ -2.02
SLF1YDR515W FSH2Q05015 223 aa2.42□□□□□ -2.02
SLF1YDR515W YLR173WQ06247 608 aa2.42□□□□□ -2.02
SLF1YDR515W YOL075CQ08234 1294 aa2.42□□□□□ -2.02
SLF1YDR515W TIR4Q12218 487 aaPredicted RBP2.42□□□□□ -2.02
SLF1YDR515W RUD3Q12234 484 aaKnown RBP2.42□□□□□ -2.02
SLF1YDR515W CFT1Q06632 1357 aaKnown RBP2.41□□□□□ -2.02
SLF1YDR515W RAD1P06777 1100 aa2.41□□□□□ -2.02
SLF1YDR515W RAD7P06779 565 aa2.41□□□□□ -2.02
SLF1YDR515W EFB1P32471 206 aaKnown RBP2.41□□□□□ -2.02
SLF1YDR515W IMP3P32899 183 aaPredicted RBP2.41□□□□□ -2.02
SLF1YDR515W MSN4P33749 630 aa2.41□□□□□ -2.02
SLF1YDR515W SHE1P38200 338 aa2.41□□□□□ -2.02
SLF1YDR515W YHR045WP38775 560 aa2.41□□□□□ -2.02
SLF1YDR515W BTT1P40314 149 aaPredicted RBP2.41□□□□□ -2.02
SLF1YDR515W CDC40P40968 455 aaPredicted RBP2.41□□□□□ -2.02
SLF1YDR515W BNA6P43619 295 aa2.41□□□□□ -2.02
SLF1YDR515W INP2Q03824 705 aa2.41□□□□□ -2.02
SLF1YDR515W SAM4Q08985 325 aaKnown RBP2.41□□□□□ -2.02
SLF1YDR515W YOL085CQ99345 113 aa2.41□□□□□ -2.02
SLF1YDR515W RPL23AP0CX41 137 aaKnown RBP2.4□□□□□ -2.03
SLF1YDR515W RPL23BP0CX42 137 aaKnown RBP2.4□□□□□ -2.03
SLF1YDR515W ASP3-2P0CX77 362 aa2.4□□□□□ -2.03
SLF1YDR515W ASP3-3P0CX78 362 aa2.4□□□□□ -2.03
SLF1YDR515W ASP3-4P0CX79 362 aa2.4□□□□□ -2.03
SLF1YDR515W ASP3-1P0CZ17 362 aa2.4□□□□□ -2.03
SLF1YDR515W MSS116P15424 664 aaKnown RBP2.4□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms