RNA–Protein interactions for RNA: YBR260C

RGD1, Transcript of GTPase-activating protein (RhoGAP) for Rho3p and Rho4p, yeastyeast

Gene RGD1, Length 2,001 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RGD1YBR260C IES4Q08561 116 aa5.72□□□□□ -1.49
RGD1YBR260C YTM1Q12024 460 aaPredicted RBP5.72□□□□□ -1.49
RGD1YBR260C YOL114CQ12322 202 aa5.72□□□□□ -1.49
RGD1YBR260C YIL134C-AQ45U18 67 aa5.72□□□□□ -1.49
RGD1YBR260C HTB1P02293 131 aaKnown RBP5.72□□□□□ -1.49
RGD1YBR260C HTB2P02294 131 aa5.72□□□□□ -1.49
RGD1YBR260C TY1A-HP0C2I4 478 aaKnown RBP5.72□□□□□ -1.49
RGD1YBR260C ASP3-2P0CX77 362 aa5.72□□□□□ -1.49
RGD1YBR260C ASP3-3P0CX78 362 aa5.72□□□□□ -1.49
RGD1YBR260C ASP3-4P0CX79 362 aa5.72□□□□□ -1.49
RGD1YBR260C ASP3-1P0CZ17 362 aa5.72□□□□□ -1.49
RGD1YBR260C SAM1P10659 382 aaKnown RBP5.72□□□□□ -1.49
RGD1YBR260C RPL4AP10664 362 aaKnown RBP5.72□□□□□ -1.49
RGD1YBR260C APE1P14904 514 aa5.72□□□□□ -1.49
RGD1YBR260C YPT7P32939 208 aa5.72□□□□□ -1.49
RGD1YBR260C ASH1P34233 588 aa5.72□□□□□ -1.49
RGD1YBR260C SCD5P34758 872 aa5.72□□□□□ -1.49
RGD1YBR260C FLR1P38124 548 aa5.72□□□□□ -1.49
RGD1YBR260C NPR2P39923 615 aa5.72□□□□□ -1.49
RGD1YBR260C CIN5P40917 295 aa5.72□□□□□ -1.49
RGD1YBR260C POP1P41812 875 aa5.72□□□□□ -1.49
RGD1YBR260C IBA57P47158 497 aa5.72□□□□□ -1.49
RGD1YBR260C RPL4BP49626 362 aaKnown RBP5.72□□□□□ -1.49
RGD1YBR260C BOL2P53082 120 aa5.72□□□□□ -1.49
RGD1YBR260C PRM1P53835 661 aa5.72□□□□□ -1.49
RGD1YBR260C ARG7Q04728 441 aa5.72□□□□□ -1.49
RGD1YBR260C RTK1Q12100 620 aaPredicted RBP5.72□□□□□ -1.49
RGD1YBR260C TY1A-NL1Q12391 440 aaKnown RBP5.72□□□□□ -1.49
RGD1YBR260C SFG1Q12507 346 aa5.72□□□□□ -1.49
RGD1YBR260C TIF6Q12522 245 aaKnown RBP5.72□□□□□ -1.49
RGD1YBR260C YLR099W-AQ3E798 87 aa5.72□□□□□ -1.49
RGD1YBR260C KIN28P06242 306 aa5.71□□□□□ -1.5
RGD1YBR260C ADH3P07246 375 aaKnown RBP5.71□□□□□ -1.5
RGD1YBR260C YPK1P12688 680 aaKnown RBP5.71□□□□□ -1.5
RGD1YBR260C ARE1P25628 610 aa5.71□□□□□ -1.5
RGD1YBR260C DAL80P26343 269 aa5.71□□□□□ -1.5
RGD1YBR260C COQ3P27680 312 aa5.71□□□□□ -1.5
RGD1YBR260C EFM1P38732 585 aa5.71□□□□□ -1.5
RGD1YBR260C PEX28P38848 579 aa5.71□□□□□ -1.5
RGD1YBR260C YEL028WP39989 153 aa5.71□□□□□ -1.5
RGD1YBR260C CAT5P41735 233 aa5.71□□□□□ -1.5
RGD1YBR260C HXT14P42833 540 aa5.71□□□□□ -1.5
RGD1YBR260C SET4P42948 560 aa5.71□□□□□ -1.5
RGD1YBR260C ALK1P43633 760 aaKnown RBP5.71□□□□□ -1.5
RGD1YBR260C PHB2P50085 310 aa5.71□□□□□ -1.5
RGD1YBR260C GPG1P53130 126 aa5.71□□□□□ -1.5
RGD1YBR260C YGL114WP53134 725 aa5.71□□□□□ -1.5
RGD1YBR260C SAY1P53324 424 aa5.71□□□□□ -1.5
RGD1YBR260C MPA43P53583 542 aaPredicted RBP5.71□□□□□ -1.5
RGD1YBR260C GPI15P53961 229 aa5.71□□□□□ -1.5
RGD1YBR260C LAP3Q01532 483 aaKnown RBP RIP-Chip data5.71□□□□□ -1.5not detected
RGD1YBR260C CUE4Q04201 117 aaPredicted RBP5.71□□□□□ -1.5
RGD1YBR260C MED7Q08278 222 aa5.71□□□□□ -1.5
RGD1YBR260C EFG1Q3E705 233 aaKnown RBP5.71□□□□□ -1.5
RGD1YBR260C GSC2P40989 1895 aa5.71□□□□□ -1.5
RGD1YBR260C CDC7P06243 507 aa5.7□□□□□ -1.5
RGD1YBR260C AAT2P23542 418 aaKnown RBP5.7□□□□□ -1.5
RGD1YBR260C RNA15P25299 296 aaPredicted RBP5.7□□□□□ -1.5
RGD1YBR260C VBA3P25594 458 aa5.7□□□□□ -1.5
RGD1YBR260C AHC2P25649 128 aa5.7□□□□□ -1.5
RGD1YBR260C SOF1P33750 489 aaKnown RBP5.7□□□□□ -1.5
RGD1YBR260C AIM29P36154 155 aa5.7□□□□□ -1.5
RGD1YBR260C RTC2P38279 296 aa5.7□□□□□ -1.5
RGD1YBR260C DHH1P39517 506 aaKnown RBP5.7□□□□□ -1.5
RGD1YBR260C CFD1P40558 293 aa5.7□□□□□ -1.5
RGD1YBR260C BIT61P47041 543 aa5.7□□□□□ -1.5
RGD1YBR260C ADO1P47143 340 aaKnown RBP5.7□□□□□ -1.5
RGD1YBR260C AVT4P50944 713 aa5.7□□□□□ -1.5
RGD1YBR260C UFD1P53044 361 aa5.7□□□□□ -1.5
RGD1YBR260C ASI3P53983 676 aa5.7□□□□□ -1.5
RGD1YBR260C CDC14Q00684 551 aa5.7□□□□□ -1.5
RGD1YBR260C TPS1Q00764 495 aaKnown RBP5.7□□□□□ -1.5
RGD1YBR260C PIB1Q06651 286 aa5.7□□□□□ -1.5
RGD1YBR260C GPM2Q12008 311 aa5.7□□□□□ -1.5
RGD1YBR260C MMP1Q12372 583 aa5.7□□□□□ -1.5
RGD1YBR260C DED1P06634 604 aaKnown RBP5.7□□□□□ -1.5
RGD1YBR260C SHP1P34223 423 aa5.7□□□□□ -1.5
RGD1YBR260C SHE1P38200 338 aa5.7□□□□□ -1.5
RGD1YBR260C SSH1P38353 490 aaKnown RBP5.7□□□□□ -1.5
RGD1YBR260C SCD6P45978 349 aaKnown RBP RIP-Chip data5.7□□□□□ -1.5not detected
RGD1YBR260C RPA34P47006 233 aaPredicted RBP5.7□□□□□ -1.5
RGD1YBR260C BUD17P53727 317 aa5.7□□□□□ -1.5
RGD1YBR260C FRE4P53746 719 aa5.7□□□□□ -1.5
RGD1YBR260C MTQ1P53944 314 aa5.7□□□□□ -1.5
RGD1YBR260C CTK1Q03957 528 aaKnown RBP5.7□□□□□ -1.5
RGD1YBR260C BLS1Q06071 122 aa5.7□□□□□ -1.5
RGD1YBR260C RFU1Q08003 200 aa5.7□□□□□ -1.5
RGD1YBR260C YPR027CQ12079 277 aa5.7□□□□□ -1.5
RGD1YBR260C RRI1Q12468 440 aa5.7□□□□□ -1.5
RGD1YBR260C ZPS1Q12512 249 aa5.7□□□□□ -1.5
RGD1YBR260C ADH2P00331 348 aaKnown RBP5.69□□□□□ -1.5
RGD1YBR260C HIS1P00498 297 aaKnown RBP5.69□□□□□ -1.5
RGD1YBR260C CKA1P15790 372 aa5.69□□□□□ -1.5
RGD1YBR260C SEC59P20048 519 aa5.69□□□□□ -1.5
RGD1YBR260C YCR099CP25657 155 aa5.69□□□□□ -1.5
RGD1YBR260C TIP1P27654 210 aaPredicted RBP5.69□□□□□ -1.5
RGD1YBR260C MSK1P32048 576 aa5.69□□□□□ -1.5
RGD1YBR260C NTF2P33331 125 aaKnown RBP5.69□□□□□ -1.5
RGD1YBR260C TGL1P34163 548 aa5.69□□□□□ -1.5
RGD1YBR260C SFK1P35735 353 aa5.69□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 17 ms