RNA–Protein interactions for RNA: YBR258C

SHG1, Transcript of Subunit of the COMPASS (Set1C) complex, yeast

Gene SHG1, Length 429 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHG1	YBR258C	OSW5	P40219	148 aa		2.65	□□□□□ -1.99
SHG1	YBR258C	ATG18	P43601	500 aa		2.65	□□□□□ -1.99
SHG1	YBR258C	ASG7	P46993	209 aa		2.65	□□□□□ -1.99
SHG1	YBR258C	CLD1	P53264	445 aa		2.65	□□□□□ -1.99
SHG1	YBR258C	LSB1	P53281	241 aa		2.65	□□□□□ -1.99
SHG1	YBR258C	RET3	P53600	189 aa		2.65	□□□□□ -1.99
SHG1	YBR258C	MFG1	Q07684	458 aa		2.65	□□□□□ -1.99
SHG1	YBR258C	TMC1	Q08422	150 aa	Predicted RBP	2.65	□□□□□ -1.99
SHG1	YBR258C	SFG1	Q12507	346 aa		2.65	□□□□□ -1.99
SHG1	YBR258C	COX4	P04037	155 aa		2.64	□□□□□ -1.99
SHG1	YBR258C	NAT1	P12945	854 aa	Known RBP	2.64	□□□□□ -1.99
SHG1	YBR258C	COQ1	P18900	473 aa		2.64	□□□□□ -1.99
SHG1	YBR258C	SWI3	P32591	825 aa		2.64	□□□□□ -1.99
SHG1	YBR258C	RTC2	P38279	296 aa		2.64	□□□□□ -1.99
SHG1	YBR258C	SPP381	P38282	291 aa	Predicted RBP	2.64	□□□□□ -1.99
SHG1	YBR258C	WSS1	P38838	269 aa		2.64	□□□□□ -1.99
SHG1	YBR258C	YFR057W	P43625	151 aa		2.64	□□□□□ -1.99
SHG1	YBR258C	TIS11	P47977	285 aa		2.64	□□□□□ -1.99
SHG1	YBR258C	ALF1	P53904	254 aa		2.64	□□□□□ -1.99
SHG1	YBR258C	VHS1	Q03785	461 aa		2.64	□□□□□ -1.99
SHG1	YBR258C	YDR061W	Q12298	539 aa		2.64	□□□□□ -1.99
SHG1	YBR258C	HIF1	Q12373	385 aa		2.64	□□□□□ -1.99
SHG1	YBR258C	FRE6	Q12473	712 aa		2.64	□□□□□ -1.99
SHG1	YBR258C	MRPL8	P22353	238 aa		2.63	□□□□□ -1.99
SHG1	YBR258C	UBA1	P22515	1024 aa	Known RBP	2.63	□□□□□ -1.99
SHG1	YBR258C	AAT2	P23542	418 aa	Known RBP	2.63	□□□□□ -1.99
SHG1	YBR258C	RDS1	P25611	832 aa		2.63	□□□□□ -1.99
SHG1	YBR258C	DPH2	P32461	534 aa		2.63	□□□□□ -1.99
SHG1	YBR258C	PRS1	P32895	427 aa	Known RBP	2.63	□□□□□ -1.99
SHG1	YBR258C	VAM7	P32912	316 aa		2.63	□□□□□ -1.99
SHG1	YBR258C	GEP4	P38812	185 aa		2.63	□□□□□ -1.99
SHG1	YBR258C	MIG3	P39943	394 aa		2.63	□□□□□ -1.99
SHG1	YBR258C	YER186C	P40101	306 aa		2.63	□□□□□ -1.99
SHG1	YBR258C	HAC1	P41546	238 aa		2.63	□□□□□ -1.99
SHG1	YBR258C	EGT2	P42835	1041 aa		2.63	□□□□□ -1.99
SHG1	YBR258C	KEG1	P43614	200 aa		2.63	□□□□□ -1.99
SHG1	YBR258C	CIS3	P47001	227 aa		2.63	□□□□□ -1.99
SHG1	YBR258C	YNR068C	P53754	272 aa		2.63	□□□□□ -1.99
SHG1	YBR258C	UTP6	Q02354	440 aa	Known RBP	2.63	□□□□□ -1.99
SHG1	YBR258C	YML096W	Q04489	525 aa		2.63	□□□□□ -1.99
SHG1	YBR258C	YPR091C	Q06833	770 aa		2.63	□□□□□ -1.99
SHG1	YBR258C	SOD1	P00445	154 aa	Known RBP	2.62	□□□□□ -1.99
SHG1	YBR258C	SCH9	P11792	824 aa	Known RBP	2.62	□□□□□ -1.99
SHG1	YBR258C	CHA1	P25379	360 aa	Known RBP	2.62	□□□□□ -1.99
SHG1	YBR258C	ATG15	P25641	520 aa		2.62	□□□□□ -1.99
SHG1	YBR258C	EFB1	P32471	206 aa	Known RBP	2.62	□□□□□ -1.99
SHG1	YBR258C	SPO23	P33757	523 aa		2.62	□□□□□ -1.99
SHG1	YBR258C	MRPL10	P36520	322 aa		2.62	□□□□□ -1.99
SHG1	YBR258C	OM14	P38325	134 aa		2.62	□□□□□ -1.99
SHG1	YBR258C	PES4	P39684	611 aa		2.62	□□□□□ -1.99
SHG1	YBR258C	AIP1	P46680	615 aa	Known RBP	2.62	□□□□□ -1.99
SHG1	YBR258C	CRH1	P53301	507 aa		2.62	□□□□□ -1.99
SHG1	YBR258C	TRM112	P53738	135 aa	Predicted RBP	2.62	□□□□□ -1.99
SHG1	YBR258C	SWS2	P53937	143 aa		2.62	□□□□□ -1.99
SHG1	YBR258C	SKI8	Q02793	397 aa	Predicted RBP	2.62	□□□□□ -1.99
SHG1	YBR258C	DBP9	Q06218	594 aa	Known RBP	2.62	□□□□□ -1.99
SHG1	YBR258C	FCY22	Q12119	530 aa		2.62	□□□□□ -1.99
SHG1	YBR258C	GLE1	Q12315	538 aa		2.62	□□□□□ -1.99
SHG1	YBR258C	PCL9	Q12477	304 aa		2.62	□□□□□ -1.99
SHG1	YBR258C	NBL1	Q3E7Y6	73 aa		2.62	□□□□□ -1.99
SHG1	YBR258C	HSP26	P15992	214 aa	Known RBP RIP-Chip data	2.61	□□□□□ -1.99	not detected
SHG1	YBR258C	TPM1	P17536	199 aa	Known RBP	2.61	□□□□□ -1.99
SHG1	YBR258C	GRR1	P24814	1151 aa		2.61	□□□□□ -1.99
SHG1	YBR258C	PHO84	P25297	587 aa	Known RBP	2.61	□□□□□ -1.99
SHG1	YBR258C	LSM12	P38828	187 aa	Known RBP	2.61	□□□□□ -1.99
SHG1	YBR258C	OXA1	P39952	402 aa		2.61	□□□□□ -1.99
SHG1	YBR258C	BTT1	P40314	149 aa	Predicted RBP	2.61	□□□□□ -1.99
SHG1	YBR258C	LYS12	P40495	371 aa	Known RBP	2.61	□□□□□ -1.99
SHG1	YBR258C	EFM3	P47163	339 aa		2.61	□□□□□ -1.99
SHG1	YBR258C	COQ5	P49017	307 aa		2.61	□□□□□ -1.99
SHG1	YBR258C	ADD37	Q03233	198 aa		2.61	□□□□□ -1.99
SHG1	YBR258C	TRM82	Q03774	444 aa		2.61	□□□□□ -1.99
SHG1	YBR258C	YET2	Q04210	160 aa		2.61	□□□□□ -1.99
SHG1	YBR258C	YOL024W	Q08172	172 aa		2.61	□□□□□ -1.99
SHG1	YBR258C	YDL199C	Q12407	687 aa		2.61	□□□□□ -1.99
SHG1	YBR258C	HTZ1	Q12692	134 aa	Known RBP	2.61	□□□□□ -1.99
SHG1	YBR258C	NAG1	Q8TGN9	163 aa		2.61	□□□□□ -1.99
SHG1	YBR258C	RPS16A	P0CX51	143 aa	Known RBP	2.6	□□□□□ -1.99
SHG1	YBR258C	RPS16B	P0CX52	143 aa	Known RBP	2.6	□□□□□ -1.99
SHG1	YBR258C	CIN8	P27895	1000 aa		2.6	□□□□□ -1.99
SHG1	YBR258C	MSK1	P32048	576 aa		2.6	□□□□□ -1.99
SHG1	YBR258C	YEL043W	P32618	956 aa		2.6	□□□□□ -1.99
SHG1	YBR258C	LAS1	P36146	502 aa	Predicted RBP	2.6	□□□□□ -1.99
SHG1	YBR258C	YHR122W	P38829	231 aa		2.6	□□□□□ -1.99
SHG1	YBR258C	SEC9	P40357	651 aa		2.6	□□□□□ -1.99
SHG1	YBR258C	DFG10	P40526	253 aa		2.6	□□□□□ -1.99
SHG1	YBR258C	SEC27	P41811	889 aa	Known RBP	2.6	□□□□□ -1.99
SHG1	YBR258C	RPA34	P47006	233 aa	Predicted RBP	2.6	□□□□□ -1.99
SHG1	YBR258C	VEL1	P53058	206 aa		2.6	□□□□□ -1.99
SHG1	YBR258C	AQR1	P53943	586 aa		2.6	□□□□□ -1.99
SHG1	YBR258C	GAT3	Q07928	141 aa		2.6	□□□□□ -1.99
SHG1	YBR258C	PEX27	Q08580	376 aa		2.6	□□□□□ -1.99
SHG1	YBR258C	NFI1	Q12216	726 aa		2.6	□□□□□ -1.99
SHG1	YBR258C	MCT1	Q12283	360 aa		2.6	□□□□□ -1.99
SHG1	YBR258C	AIM45	Q12480	344 aa	Known RBP	2.6	□□□□□ -1.99
SHG1	YBR258C	THR4	P16120	514 aa	Known RBP	2.59	□□□□□ -1.99
SHG1	YBR258C	FAR1	P21268	830 aa		2.59	□□□□□ -1.99
SHG1	YBR258C	DBR1	P24309	405 aa	Known RBP	2.59	□□□□□ -1.99
SHG1	YBR258C	CDC50	P25656	391 aa		2.59	□□□□□ -1.99
SHG1	YBR258C	CWP1	P28319	239 aa		2.59	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 25.3 ms