RNA–Protein interactions for RNA: YBR154C

RPB5, Transcript of RNA polymerase subunit ABC27, yeastyeast

Gene RPB5, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB5YBR154C VPS45P38932 577 aa1.86□□□□□ -2.11
RPB5YBR154C UTP25P40498 721 aaKnown RBP1.86□□□□□ -2.11
RPB5YBR154C CDC40P40968 455 aaPredicted RBP1.86□□□□□ -2.11
RPB5YBR154C KEG1P43614 200 aa1.86□□□□□ -2.11
RPB5YBR154C TRF5P48561 642 aaKnown RBP1.86□□□□□ -2.11
RPB5YBR154C RIB4P50861 169 aaPredicted RBP1.86□□□□□ -2.11
RPB5YBR154C RPN14P53196 417 aa1.86□□□□□ -2.11
RPB5YBR154C LST7P53237 242 aa1.86□□□□□ -2.11
RPB5YBR154C SPO19Q03029 223 aa1.86□□□□□ -2.11
RPB5YBR154C ECM18Q04623 453 aa1.86□□□□□ -2.11
RPB5YBR154C YLH47Q06493 454 aa1.86□□□□□ -2.11
RPB5YBR154C YLR413WQ06689 675 aa1.86□□□□□ -2.11
RPB5YBR154C VAC14Q06708 880 aa1.86□□□□□ -2.11
RPB5YBR154C DCP1Q12517 231 aaPredicted RBP1.86□□□□□ -2.11
RPB5YBR154C DET1Q99288 334 aaKnown RBP1.86□□□□□ -2.11
RPB5YBR154C UGA1P17649 471 aa1.85□□□□□ -2.11
RPB5YBR154C ERG9P29704 444 aa1.85□□□□□ -2.11
RPB5YBR154C VMA5P31412 392 aaKnown RBP1.85□□□□□ -2.11
RPB5YBR154C ACB1P31787 87 aa1.85□□□□□ -2.11
RPB5YBR154C BUD2P33314 1104 aa1.85□□□□□ -2.11
RPB5YBR154C SPO23P33757 523 aa1.85□□□□□ -2.11
RPB5YBR154C MYO3P36006 1272 aa1.85□□□□□ -2.11
RPB5YBR154C YKR015CP36111 568 aa1.85□□□□□ -2.11
RPB5YBR154C WSC4P38739 605 aa1.85□□□□□ -2.11
RPB5YBR154C YPT35P38815 214 aaKnown RBP1.85□□□□□ -2.11
RPB5YBR154C INA22P40576 216 aa1.85□□□□□ -2.11
RPB5YBR154C NAS6P50086 228 aa1.85□□□□□ -2.11
RPB5YBR154C TAF6P53040 516 aa1.85□□□□□ -2.11
RPB5YBR154C VEL1P53058 206 aa1.85□□□□□ -2.11
RPB5YBR154C PNC1P53184 216 aaKnown RBP1.85□□□□□ -2.11
RPB5YBR154C HST4P53688 370 aa1.85□□□□□ -2.11
RPB5YBR154C LAP3Q01532 483 aaKnown RBP RIP-Chip data1.85□□□□□ -2.11not detected
RPB5YBR154C RVB1Q03940 463 aaKnown RBP1.85□□□□□ -2.11
RPB5YBR154C APC4Q04601 652 aa1.85□□□□□ -2.11
RPB5YBR154C ERV41Q04651 352 aa1.85□□□□□ -2.11
RPB5YBR154C CSM3Q04659 317 aa1.85□□□□□ -2.11
RPB5YBR154C BUR2Q05949 395 aa1.85□□□□□ -2.11
RPB5YBR154C PAA1Q12447 191 aaKnown RBP1.85□□□□□ -2.11
RPB5YBR154C SAL1D6W196 494 aa1.84□□□□□ -2.11
RPB5YBR154C CAR2P07991 424 aaKnown RBP1.84□□□□□ -2.11
RPB5YBR154C RPL16AP26784 199 aaKnown RBP1.84□□□□□ -2.11
RPB5YBR154C MKK1P32490 508 aa1.84□□□□□ -2.11
RPB5YBR154C IML3P38265 245 aa1.84□□□□□ -2.11
RPB5YBR154C MMS21P38632 267 aa1.84□□□□□ -2.11
RPB5YBR154C FET3P38993 636 aa1.84□□□□□ -2.11
RPB5YBR154C SPO73P40031 143 aa1.84□□□□□ -2.11
RPB5YBR154C YCH1P42937 148 aa1.84□□□□□ -2.11
RPB5YBR154C CIN2P46670 268 aa1.84□□□□□ -2.11
RPB5YBR154C GCD14P46959 383 aaPredicted RBP1.84□□□□□ -2.11
RPB5YBR154C CTK3P46963 296 aaPredicted RBP1.84□□□□□ -2.11
RPB5YBR154C YJR030CP47101 745 aa1.84□□□□□ -2.11
RPB5YBR154C GTO1P48239 356 aa1.84□□□□□ -2.11
RPB5YBR154C YGR168CP53293 376 aa1.84□□□□□ -2.11
RPB5YBR154C PXR1P53335 271 aaPredicted RBP1.84□□□□□ -2.11
RPB5YBR154C REX2P54964 269 aaKnown RBP1.84□□□□□ -2.11
RPB5YBR154C YMR010WQ03687 405 aa1.84□□□□□ -2.11
RPB5YBR154C UBX2Q04228 584 aa1.84□□□□□ -2.11
RPB5YBR154C ALE1Q08548 619 aa1.84□□□□□ -2.11
RPB5YBR154C MRPL23Q12487 163 aaPredicted RBP1.84□□□□□ -2.11
RPB5YBR154C UBA3Q99344 299 aa1.84□□□□□ -2.11
RPB5YBR154C HEM4P06174 275 aa1.83□□□□□ -2.12
RPB5YBR154C RPS18AP0CX55 146 aaKnown RBP1.83□□□□□ -2.12
RPB5YBR154C RPS18BP0CX56 146 aaPredicted RBP1.83□□□□□ -2.12
RPB5YBR154C MEK1P24719 497 aaPredicted RBP1.83□□□□□ -2.12
RPB5YBR154C RBK1P25332 333 aa1.83□□□□□ -2.12
RPB5YBR154C CHA1P25379 360 aaKnown RBP1.83□□□□□ -2.12
RPB5YBR154C RPL5P26321 297 aaKnown RBP1.83□□□□□ -2.12
RPB5YBR154C RAD23P32628 398 aaKnown RBP1.83□□□□□ -2.12
RPB5YBR154C AGA2P32781 87 aa1.83□□□□□ -2.12
RPB5YBR154C AST1P35183 429 aa1.83□□□□□ -2.12
RPB5YBR154C RPC25P35718 212 aa1.83□□□□□ -2.12
RPB5YBR154C YKL162CP36052 402 aa1.83□□□□□ -2.12
RPB5YBR154C YKL070WP36087 169 aa1.83□□□□□ -2.12
RPB5YBR154C PEX18P38855 283 aa1.83□□□□□ -2.12
RPB5YBR154C FHL1P39521 936 aa1.83□□□□□ -2.12
RPB5YBR154C LSG1P53145 640 aaKnown RBP1.83□□□□□ -2.12
RPB5YBR154C CWC22P53333 577 aaKnown RBP1.83□□□□□ -2.12
RPB5YBR154C YMR111CQ04461 462 aaPredicted RBP1.83□□□□□ -2.12
RPB5YBR154C YDR115WQ04598 105 aa1.83□□□□□ -2.12
RPB5YBR154C DDC1Q08949 612 aa1.83□□□□□ -2.12
RPB5YBR154C YDL109CQ12103 647 aa1.83□□□□□ -2.12
RPB5YBR154C YPR1Q12458 312 aa1.83□□□□□ -2.12
RPB5YBR154C STE2D6VTK4 431 aa1.82□□□□□ -2.12
RPB5YBR154C YPR096CO13587 100 aa1.82□□□□□ -2.12
RPB5YBR154C SSA3P09435 649 aaKnown RBP1.82□□□□□ -2.12
RPB5YBR154C RPL23AP0CX41 137 aaKnown RBP1.82□□□□□ -2.12
RPB5YBR154C RPL23BP0CX42 137 aaKnown RBP1.82□□□□□ -2.12
RPB5YBR154C EPT1P22140 391 aa1.82□□□□□ -2.12
RPB5YBR154C ITR2P30606 609 aa1.82□□□□□ -2.12
RPB5YBR154C PDC2P32896 925 aa1.82□□□□□ -2.12
RPB5YBR154C YMR262WP38430 313 aa1.82□□□□□ -2.12
RPB5YBR154C YNL320WP42840 284 aa1.82□□□□□ -2.12
RPB5YBR154C COX16P47081 118 aa1.82□□□□□ -2.12
RPB5YBR154C MND1P53102 219 aa1.82□□□□□ -2.12
RPB5YBR154C OKP1P53298 406 aa1.82□□□□□ -2.12
RPB5YBR154C YNL260CP53846 198 aa1.82□□□□□ -2.12
RPB5YBR154C PRP38Q00723 242 aaPredicted RBP1.82□□□□□ -2.12
RPB5YBR154C KAP95Q06142 861 aaKnown RBP1.82□□□□□ -2.12
RPB5YBR154C BCP1Q06338 283 aa1.82□□□□□ -2.12
RPB5YBR154C SAM4Q08985 325 aaKnown RBP1.82□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 11.2 ms