RNA–Protein interactions for RNA: ENST00000635994.1

GABRB3-218, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 5,192 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-218ENST00000635994 KRT4P19013 534 aa6.74□□□□□ -1.33
GABRB3-218ENST00000635994 SCP2P22307 547 aa6.74□□□□□ -1.33
GABRB3-218ENST00000635994 PSMA2P25787 234 aa6.74□□□□□ -1.33
GABRB3-218ENST00000635994 EEF1DP29692 281 aaKnown RBP6.74□□□□□ -1.33
GABRB3-218ENST00000635994 ANXA11P50995 505 aaKnown RBP6.74□□□□□ -1.33
GABRB3-218ENST00000635994 HSD17B4P51659 736 aa6.74□□□□□ -1.33
GABRB3-218ENST00000635994 ABCE1P61221 599 aaKnown RBP6.74□□□□□ -1.33
GABRB3-218ENST00000635994 CDK17Q00537 523 aa6.74□□□□□ -1.33
GABRB3-218ENST00000635994 LRRC63Q05C16 580 aa6.74□□□□□ -1.33
GABRB3-218ENST00000635994 USP17L24Q0WX57 530 aa6.74□□□□□ -1.33
GABRB3-218ENST00000635994 KIF19Q2TAC6 998 aa6.74□□□□□ -1.33
GABRB3-218ENST00000635994 SYTL3Q4VX76 610 aa6.74□□□□□ -1.33
GABRB3-218ENST00000635994 SLC39A2Q9NP94 309 aa6.74□□□□□ -1.33
GABRB3-218ENST00000635994 SLC38A7Q9NVC3 462 aa6.74□□□□□ -1.33
GABRB3-218ENST00000635994 HDAC6Q9UBN7 1215 aa6.74□□□□□ -1.33
GABRB3-218ENST00000635994 A0A1W2PQ27 194 aa6.74□□□□□ -1.33
GABRB3-218ENST00000635994 A0A1W2PQ64 194 aa6.74□□□□□ -1.33
GABRB3-218ENST00000635994 A0A1W2PQD8 194 aa6.74□□□□□ -1.33
GABRB3-218ENST00000635994 DNAJC6O75061 913 aa6.74□□□□□ -1.33
GABRB3-218ENST00000635994 PPP6R2O75170 966 aa6.74□□□□□ -1.33
GABRB3-218ENST00000635994 GPC3P51654 580 aa6.74□□□□□ -1.33
GABRB3-218ENST00000635994 NCKAP1LP55160 1127 aa6.74□□□□□ -1.33
GABRB3-218ENST00000635994 RASGRF1Q13972 1273 aa6.74□□□□□ -1.33
GABRB3-218ENST00000635994 PREPLQ4J6C6 727 aaPredicted RBP6.74□□□□□ -1.33
GABRB3-218ENST00000635994 SPICE1Q8N0Z3 855 aa6.74□□□□□ -1.33
GABRB3-218ENST00000635994 USP13Q92995 863 aaPredicted RBP6.74□□□□□ -1.33
GABRB3-218ENST00000635994 CNOT6LQ96LI5 555 aaKnown RBP6.74□□□□□ -1.33
GABRB3-218ENST00000635994 TIPINQ9BVW5 301 aa6.74□□□□□ -1.33
GABRB3-218ENST00000635994 MRPL4Q9BYD3 311 aaKnown RBP6.74□□□□□ -1.33
GABRB3-218ENST00000635994 PRDM10Q9NQV6 1147 aa6.74□□□□□ -1.33
GABRB3-218ENST00000635994 BFARQ9NZS9 450 aa6.74□□□□□ -1.33
GABRB3-218ENST00000635994 MPP6Q9NZW5 540 aa6.74□□□□□ -1.33
GABRB3-218ENST00000635994 SEL1LQ9UBV2 794 aa6.74□□□□□ -1.33
GABRB3-218ENST00000635994 SCOCQ9UIL1 159 aa6.74□□□□□ -1.33
GABRB3-218ENST00000635994 ARHGAP26Q9UNA1 814 aa6.74□□□□□ -1.33
GABRB3-218ENST00000635994 PCDHB15Q9Y5E8 787 aa6.74□□□□□ -1.33
GABRB3-218ENST00000635994 SNX5Q9Y5X3 404 aa6.74□□□□□ -1.33
GABRB3-218ENST00000635994 TBC1D12O60347 775 aa6.73□□□□□ -1.33
GABRB3-218ENST00000635994 ASMTLO95671 621 aa6.73□□□□□ -1.33
GABRB3-218ENST00000635994 PFKFB1P16118 471 aa6.73□□□□□ -1.33
GABRB3-218ENST00000635994 GUCA1AP43080 201 aaPredicted RBP6.73□□□□□ -1.33
GABRB3-218ENST00000635994 ARL4CP56559 192 aa6.73□□□□□ -1.33
GABRB3-218ENST00000635994 GABPB1Q06547 395 aaPredicted RBP6.73□□□□□ -1.33
GABRB3-218ENST00000635994 FLOT2Q14254 428 aa6.73□□□□□ -1.33
GABRB3-218ENST00000635994 TAF1CQ15572 869 aaPredicted RBP6.73□□□□□ -1.33
GABRB3-218ENST00000635994 ANO4Q32M45 955 aa6.73□□□□□ -1.33
GABRB3-218ENST00000635994 ZNF568Q3ZCX4 644 aa6.73□□□□□ -1.33
GABRB3-218ENST00000635994 IER5Q5VY09 327 aa6.73□□□□□ -1.33
GABRB3-218ENST00000635994 DDX53Q86TM3 631 aaKnown RBP6.73□□□□□ -1.33
GABRB3-218ENST00000635994 HSPH1Q92598 858 aa6.73□□□□□ -1.33
GABRB3-218ENST00000635994 TRIM55Q9BYV6 548 aa6.73□□□□□ -1.33
GABRB3-218ENST00000635994 DPH5Q9H2P9 285 aa6.73□□□□□ -1.33
GABRB3-218ENST00000635994 NGRNQ9NPE2 291 aaKnown RBP6.73□□□□□ -1.33
GABRB3-218ENST00000635994 FLT1P17948 1338 aa6.73□□□□□ -1.33
GABRB3-218ENST00000635994 UBR1Q8IWV7 1749 aa6.73□□□□□ -1.33
GABRB3-218ENST00000635994 RPS6KA4O75676 772 aa6.73□□□□□ -1.33
GABRB3-218ENST00000635994 CSPG5O95196 566 aa6.73□□□□□ -1.33
GABRB3-218ENST00000635994 MYCP01106 439 aaPredicted RBP6.73□□□□□ -1.33
GABRB3-218ENST00000635994 KRT7P08729 469 aa6.73□□□□□ -1.33
GABRB3-218ENST00000635994 MMP10P09238 476 aa6.73□□□□□ -1.33
GABRB3-218ENST00000635994 HSPA1AP0DMV8 641 aaKnown RBP6.73□□□□□ -1.33
GABRB3-218ENST00000635994 HSPA1BP0DMV9 641 aaKnown RBP6.73□□□□□ -1.33
GABRB3-218ENST00000635994 EEF1B2P24534 225 aaKnown RBP6.73□□□□□ -1.33
GABRB3-218ENST00000635994 AARSP49588 968 aaKnown RBP eCLIP6.73□□□□□ -1.33
GABRB3-218ENST00000635994 RWDD2BP57060 319 aa6.73□□□□□ -1.33
GABRB3-218ENST00000635994 PRAMEP78395 509 aa6.73□□□□□ -1.33
GABRB3-218ENST00000635994 SEMA3FQ13275 785 aa6.73□□□□□ -1.33
GABRB3-218ENST00000635994 ARHGEF7Q14155 803 aa6.73□□□□□ -1.33
GABRB3-218ENST00000635994 ZNF699Q32M78 642 aa6.73□□□□□ -1.33
GABRB3-218ENST00000635994 DGKHQ86XP1 1220 aa6.73□□□□□ -1.33
GABRB3-218ENST00000635994 CRLF3Q8IUI8 442 aa6.73□□□□□ -1.33
GABRB3-218ENST00000635994 CCDC197Q8NCU1 140 aa6.73□□□□□ -1.33
GABRB3-218ENST00000635994 FAM227BQ96M60 508 aa6.73□□□□□ -1.33
GABRB3-218ENST00000635994 FAM20AQ96MK3 541 aa6.73□□□□□ -1.33
GABRB3-218ENST00000635994 UIMC1Q96RL1 719 aa6.73□□□□□ -1.33
GABRB3-218ENST00000635994 DNAJC7Q99615 494 aa6.73□□□□□ -1.33
GABRB3-218ENST00000635994 TUBGCP2Q9BSJ2 902 aa6.73□□□□□ -1.33
GABRB3-218ENST00000635994 EPN1Q9Y6I3 576 aaPredicted RBP6.73□□□□□ -1.33
GABRB3-218ENST00000635994 ZC3H4Q9UPT8 1303 aaKnown RBP6.73□□□□□ -1.33
GABRB3-218ENST00000635994 ZBTB7BO15156 539 aaPredicted RBP6.73□□□□□ -1.33
GABRB3-218ENST00000635994 TOM1L1O75674 476 aa6.73□□□□□ -1.33
GABRB3-218ENST00000635994 CDH2P19022 906 aaPredicted RBP6.73□□□□□ -1.33
GABRB3-218ENST00000635994 COPB1P53618 953 aaKnown RBP6.73□□□□□ -1.33
GABRB3-218ENST00000635994 NR5A1Q13285 461 aa6.73□□□□□ -1.33
GABRB3-218ENST00000635994 MORC4Q8TE76 937 aa6.73□□□□□ -1.33
GABRB3-218ENST00000635994 PYROXD1Q8WU10 500 aa6.73□□□□□ -1.33
GABRB3-218ENST00000635994 WRNIP1Q96S55 665 aa6.73□□□□□ -1.33
GABRB3-218ENST00000635994 ZNF302Q9NR11 478 aa6.73□□□□□ -1.33
GABRB3-218ENST00000635994 PHLPP1O60346 1717 aa6.73□□□□□ -1.33
GABRB3-218ENST00000635994 RASSF10A6NK89 507 aa6.73□□□□□ -1.33
GABRB3-218ENST00000635994 C5orf58C9J3I9 102 aa6.73□□□□□ -1.33
GABRB3-218ENST00000635994 PRPF4O43172 522 aaKnown RBP eCLIP6.73□□□□□ -1.33
GABRB3-218ENST00000635994 SUPT3HO75486 399 aa6.73□□□□□ -1.33
GABRB3-218ENST00000635994 GDF11O95390 407 aa6.73□□□□□ -1.33
GABRB3-218ENST00000635994 FAM107AO95990 144 aa6.73□□□□□ -1.33
GABRB3-218ENST00000635994 ATXN8OSP0DMR3 200 aa6.73□□□□□ -1.33
GABRB3-218ENST00000635994 MYBL1P10243 752 aa6.73□□□□□ -1.33
GABRB3-218ENST00000635994 OCA2Q04671 838 aa6.73□□□□□ -1.33
GABRB3-218ENST00000635994 MORF4L2Q15014 288 aa6.73□□□□□ -1.33
GABRB3-218ENST00000635994 PTPAQ15257 358 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms