RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 PLXNA4Q9HCM2 1894 aa6.36□□□□□ -1.39
CPNE3-208ENST00000614678 MYBP10242 640 aa6.36□□□□□ -1.39
CPNE3-208ENST00000614678 EIF4BP23588 611 aaKnown RBP6.36□□□□□ -1.39
CPNE3-208ENST00000614678 IRS1P35568 1242 aa6.36□□□□□ -1.39
CPNE3-208ENST00000614678 SLC26A2P50443 739 aa6.36□□□□□ -1.39
CPNE3-208ENST00000614678 GRB10Q13322 594 aa6.36□□□□□ -1.39
CPNE3-208ENST00000614678 PTPAQ15257 358 aa6.36□□□□□ -1.39
CPNE3-208ENST00000614678 C4orf19Q8IY42 314 aa6.36□□□□□ -1.39
CPNE3-208ENST00000614678 DAW1Q8N136 415 aa6.36□□□□□ -1.39
CPNE3-208ENST00000614678 IGSF22Q8N9C0 903 aa6.36□□□□□ -1.39
CPNE3-208ENST00000614678 YME1L1Q96TA2 773 aa6.36□□□□□ -1.39
CPNE3-208ENST00000614678 NRBP2Q9NSY0 501 aa6.36□□□□□ -1.39
CPNE3-208ENST00000614678 MRPL42Q9Y6G3 142 aaKnown RBP6.36□□□□□ -1.39
CPNE3-208ENST00000614678 TRIP11Q15643 1979 aa6.36□□□□□ -1.39
CPNE3-208ENST00000614678 ABHD14A-ACY1A0A1B0GW23 586 aa6.36□□□□□ -1.39
CPNE3-208ENST00000614678 TBX3O15119 743 aa6.36□□□□□ -1.39
CPNE3-208ENST00000614678 DARSP14868 501 aaKnown RBP6.36□□□□□ -1.39
CPNE3-208ENST00000614678 CASP1P29466 404 aa6.36□□□□□ -1.39
CPNE3-208ENST00000614678 CCT6AP40227 531 aaKnown RBP6.36□□□□□ -1.39
CPNE3-208ENST00000614678 CDR1P51861 262 aa6.36□□□□□ -1.39
CPNE3-208ENST00000614678 CLLU1OSQ5K130 101 aa6.36□□□□□ -1.39
CPNE3-208ENST00000614678 MCTP2Q6DN12 878 aa6.36□□□□□ -1.39
CPNE3-208ENST00000614678 RPAINQ86UA6 219 aa6.36□□□□□ -1.39
CPNE3-208ENST00000614678 SLFN12Q8IYM2 578 aa6.36□□□□□ -1.39
CPNE3-208ENST00000614678 CCDC155Q8N6L0 562 aa6.36□□□□□ -1.39
CPNE3-208ENST00000614678 SNX29Q8TEQ0 813 aa6.36□□□□□ -1.39
CPNE3-208ENST00000614678 ZSWIM4Q9H7M6 989 aa6.36□□□□□ -1.39
CPNE3-208ENST00000614678 LRWD1Q9UFC0 647 aa6.36□□□□□ -1.39
CPNE3-208ENST00000614678 GRM6O15303 877 aa6.36□□□□□ -1.39
CPNE3-208ENST00000614678 ATP2C1P98194 919 aaPredicted RBP6.36□□□□□ -1.39
CPNE3-208ENST00000614678 SEZ6Q53EL9 994 aa6.36□□□□□ -1.39
CPNE3-208ENST00000614678 FAM84AQ96KN4 292 aa6.36□□□□□ -1.39
CPNE3-208ENST00000614678 NECAB3Q96P71 396 aaPredicted RBP6.36□□□□□ -1.39
CPNE3-208ENST00000614678 GDPD2Q9HCC8 539 aa6.36□□□□□ -1.39
CPNE3-208ENST00000614678 COL4A3BPQ9Y5P4 624 aa6.36□□□□□ -1.39
CPNE3-208ENST00000614678 FRYLO94915 3013 aa6.35□□□□□ -1.39
CPNE3-208ENST00000614678 C9IYK1 514 aa6.35□□□□□ -1.39
CPNE3-208ENST00000614678 DGKIO75912 1065 aa6.35□□□□□ -1.39
CPNE3-208ENST00000614678 BAG4O95429 457 aaKnown RBP6.35□□□□□ -1.39
CPNE3-208ENST00000614678 RFC2P35250 354 aa6.35□□□□□ -1.39
CPNE3-208ENST00000614678 CRYBB1P53674 252 aaPredicted RBP6.35□□□□□ -1.39
CPNE3-208ENST00000614678 DSC3Q14574 896 aa6.35□□□□□ -1.39
CPNE3-208ENST00000614678 CSRNP2Q9H175 543 aa6.35□□□□□ -1.39
CPNE3-208ENST00000614678 POLR3FQ9H1D9 316 aaPredicted RBP6.35□□□□□ -1.39
CPNE3-208ENST00000614678 MSRAQ9UJ68 235 aa6.35□□□□□ -1.39
CPNE3-208ENST00000614678 PLAGL2Q9UPG8 496 aa6.35□□□□□ -1.39
CPNE3-208ENST00000614678 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.35□□□□□ -1.39
CPNE3-208ENST00000614678 STX6O43752 255 aa6.35□□□□□ -1.39
CPNE3-208ENST00000614678 ACTN1P12814 892 aa6.35□□□□□ -1.39
CPNE3-208ENST00000614678 HTRA4P83105 476 aaPredicted RBP6.35□□□□□ -1.39
CPNE3-208ENST00000614678 EPC2Q52LR7 807 aa6.35□□□□□ -1.39
CPNE3-208ENST00000614678 ARSHQ5FYA8 562 aa6.35□□□□□ -1.39
CPNE3-208ENST00000614678 SCARA3Q6AZY7 606 aa6.35□□□□□ -1.39
CPNE3-208ENST00000614678 TMEM192Q8IY95 271 aa6.35□□□□□ -1.39
CPNE3-208ENST00000614678 MAFAQ8NHW3 353 aaPredicted RBP6.35□□□□□ -1.39
CPNE3-208ENST00000614678 BCL7CQ8WUZ0 217 aaPredicted RBP6.35□□□□□ -1.39
CPNE3-208ENST00000614678 ZNF689Q96CS4 500 aaPredicted RBP6.35□□□□□ -1.39
CPNE3-208ENST00000614678 ZFP42Q96MM3 310 aa6.35□□□□□ -1.39
CPNE3-208ENST00000614678 SLC9A7Q96T83 725 aa6.35□□□□□ -1.39
CPNE3-208ENST00000614678 RAD9AQ99638 391 aa6.35□□□□□ -1.39
CPNE3-208ENST00000614678 APOL6Q9BWW8 343 aa6.35□□□□□ -1.39
CPNE3-208ENST00000614678 SEZ6LQ9BYH1 1024 aa6.35□□□□□ -1.39
CPNE3-208ENST00000614678 FGFBP2Q9BYJ0 223 aa6.35□□□□□ -1.39
CPNE3-208ENST00000614678 TSPYL2Q9H2G4 693 aaPredicted RBP6.35□□□□□ -1.39
CPNE3-208ENST00000614678 RTN4Q9NQC3 1192 aaKnown RBP6.35□□□□□ -1.39
CPNE3-208ENST00000614678 TYW1Q9NV66 732 aaKnown RBP6.35□□□□□ -1.39
CPNE3-208ENST00000614678 MIOSQ9NXC5 875 aa6.35□□□□□ -1.39
CPNE3-208ENST00000614678 PIN4Q9Y237 131 aaKnown RBP6.35□□□□□ -1.39
CPNE3-208ENST00000614678 PCDHA11Q9Y5I1 949 aa6.35□□□□□ -1.39
CPNE3-208ENST00000614678 DENND3A2RUS2 1198 aa6.35□□□□□ -1.39
CPNE3-208ENST00000614678 TISP43B9A030 160 aa6.35□□□□□ -1.39
CPNE3-208ENST00000614678 SSBP05455 408 aaKnown RBP eCLIP6.35□□□□□ -1.39
CPNE3-208ENST00000614678 PFKMP08237 780 aa6.35□□□□□ -1.39
CPNE3-208ENST00000614678 AKAP5P24588 427 aa6.35□□□□□ -1.39
CPNE3-208ENST00000614678 RPA1P27694 616 aa6.35□□□□□ -1.39
CPNE3-208ENST00000614678 AMHR2Q16671 573 aa6.35□□□□□ -1.39
CPNE3-208ENST00000614678 UBXN11Q5T124 520 aa6.35□□□□□ -1.39
CPNE3-208ENST00000614678 PADI6Q6TGC4 694 aa6.35□□□□□ -1.39
CPNE3-208ENST00000614678 RSPH3Q86UC2 560 aa6.35□□□□□ -1.39
CPNE3-208ENST00000614678 ZNF280BQ86YH2 543 aa6.35□□□□□ -1.39
CPNE3-208ENST00000614678 CEP120Q8N960 986 aa6.35□□□□□ -1.39
CPNE3-208ENST00000614678 HELQQ8TDG4 1101 aa6.35□□□□□ -1.39
CPNE3-208ENST00000614678 HPS3Q969F9 1004 aa6.35□□□□□ -1.39
CPNE3-208ENST00000614678 KLK14Q9P0G3 267 aa6.35□□□□□ -1.39
CPNE3-208ENST00000614678 DNAJB4Q9UDY4 337 aa6.35□□□□□ -1.39
CPNE3-208ENST00000614678 MTCH2Q9Y6C9 303 aa6.35□□□□□ -1.39
CPNE3-208ENST00000614678 COL1A2P08123 1366 aa6.34□□□□□ -1.39
CPNE3-208ENST00000614678 BAIAP3O94812 1187 aa6.34□□□□□ -1.39
CPNE3-208ENST00000614678 FXR2P51116 673 aaKnown RBP eCLIP6.34□□□□□ -1.39
CPNE3-208ENST00000614678 KCNQ1P51787 676 aa6.34□□□□□ -1.39
CPNE3-208ENST00000614678 DLX2Q07687 328 aaPredicted RBP6.34□□□□□ -1.39
CPNE3-208ENST00000614678 MAPK7Q13164 816 aa6.34□□□□□ -1.39
CPNE3-208ENST00000614678 KANK3Q6NY19 840 aa6.34□□□□□ -1.39
CPNE3-208ENST00000614678 TAS1R3Q7RTX0 852 aa6.34□□□□□ -1.39
CPNE3-208ENST00000614678 ADGRD2Q7Z7M1 963 aa6.34□□□□□ -1.39
CPNE3-208ENST00000614678 PDILTQ8N807 584 aa6.34□□□□□ -1.39
CPNE3-208ENST00000614678 GLIS3Q8NEA6 775 aa6.34□□□□□ -1.39
CPNE3-208ENST00000614678 AUTS2Q8WXX7 1259 aa6.34□□□□□ -1.39
CPNE3-208ENST00000614678 SLC7A3Q8WY07 619 aa6.34□□□□□ -1.39
CPNE3-208ENST00000614678 MTRQ99707 1265 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms