RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 SAMD11Q96NU1 681 aa16.49■□□□□ 0.23
ATG4D-207ENST00000587256 DBR1Q9UK59 544 aaKnown RBP16.49■□□□□ 0.23
ATG4D-207ENST00000587256 PIN4Q9Y237 131 aaKnown RBP16.49■□□□□ 0.23
ATG4D-207ENST00000587256 VWA3AA6NCI4 1184 aa16.48■□□□□ 0.23
ATG4D-207ENST00000587256 PP2D1A8MPX8 630 aa16.48■□□□□ 0.23
ATG4D-207ENST00000587256 C9IYK1 514 aa16.48■□□□□ 0.23
ATG4D-207ENST00000587256 ASAP2O43150 1006 aa16.48■□□□□ 0.23
ATG4D-207ENST00000587256 MUTP22033 750 aa16.48■□□□□ 0.23
ATG4D-207ENST00000587256 CTNNB1P35222 781 aa16.48■□□□□ 0.23
ATG4D-207ENST00000587256 GATMP50440 423 aa16.48■□□□□ 0.23
ATG4D-207ENST00000587256 GRB10Q13322 594 aa16.48■□□□□ 0.23
ATG4D-207ENST00000587256 MXD4Q14582 209 aaPredicted RBP16.48■□□□□ 0.23
ATG4D-207ENST00000587256 CMTR2Q8IYT2 770 aaKnown RBP16.48■□□□□ 0.23
ATG4D-207ENST00000587256 RNF149Q8NC42 400 aa16.48■□□□□ 0.23
ATG4D-207ENST00000587256 RNF169Q8NCN4 708 aa16.48■□□□□ 0.23
ATG4D-207ENST00000587256 POLR3FQ9H1D9 316 aaPredicted RBP16.48■□□□□ 0.23
ATG4D-207ENST00000587256 DDX19AQ9NUU7 478 aaKnown RBP16.48■□□□□ 0.23
ATG4D-207ENST00000587256 TMEM161AQ9NX61 479 aa16.48■□□□□ 0.23
ATG4D-207ENST00000587256 DACT1Q9NYF0 836 aa16.48■□□□□ 0.23
ATG4D-207ENST00000587256 RWDD3Q9Y3V2 267 aa16.48■□□□□ 0.23
ATG4D-207ENST00000587256 COL6A3P12111 3177 aa16.47■□□□□ 0.23
ATG4D-207ENST00000587256 BMP15O95972 392 aa16.47■□□□□ 0.23
ATG4D-207ENST00000587256 ZRSR1Q15695 479 aaKnown RBP16.47■□□□□ 0.23
ATG4D-207ENST00000587256 CCDC85BQ15834 202 aaPredicted RBP16.47■□□□□ 0.23
ATG4D-207ENST00000587256 IL17AQ16552 155 aa16.47■□□□□ 0.23
ATG4D-207ENST00000587256 EPC2Q52LR7 807 aa16.47■□□□□ 0.23
ATG4D-207ENST00000587256 TWF2Q6IBS0 349 aaKnown RBP16.47■□□□□ 0.23
ATG4D-207ENST00000587256 PADI6Q6TGC4 694 aa16.47■□□□□ 0.23
ATG4D-207ENST00000587256 MAEAQ7L5Y9 396 aa16.47■□□□□ 0.23
ATG4D-207ENST00000587256 SRGAP1Q7Z6B7 1085 aa16.47■□□□□ 0.23
ATG4D-207ENST00000587256 TMEM192Q8IY95 271 aa16.47■□□□□ 0.23
ATG4D-207ENST00000587256 CRIPAKQ8N1N5 446 aa16.47■□□□□ 0.23
ATG4D-207ENST00000587256 MCPH1Q8NEM0 835 aa16.47■□□□□ 0.23
ATG4D-207ENST00000587256 ASAP3Q8TDY4 903 aa16.47■□□□□ 0.23
ATG4D-207ENST00000587256 ZNF689Q96CS4 500 aaPredicted RBP16.47■□□□□ 0.23
ATG4D-207ENST00000587256 IFT122Q9HBG6 1241 aa16.47■□□□□ 0.23
ATG4D-207ENST00000587256 KIAA1024Q9UPX6 916 aa16.47■□□□□ 0.23
ATG4D-207ENST00000587256 RALGAPA2Q2PPJ7 1873 aa16.46■□□□□ 0.23
ATG4D-207ENST00000587256 NLRC5Q86WI3 1866 aa16.46■□□□□ 0.23
ATG4D-207ENST00000587256 TBKBP1A7MCY6 615 aa16.46■□□□□ 0.23
ATG4D-207ENST00000587256 CDC25AP30304 524 aa16.46■□□□□ 0.23
ATG4D-207ENST00000587256 CAPSQ13938 189 aa16.46■□□□□ 0.23
ATG4D-207ENST00000587256 FAM102BQ5T8I3 360 aa16.46■□□□□ 0.23
ATG4D-207ENST00000587256 ARL6IP4Q66PJ3 421 aaKnown RBP16.46■□□□□ 0.23
ATG4D-207ENST00000587256 BHMT2Q9H2M3 363 aa16.46■□□□□ 0.23
ATG4D-207ENST00000587256 ELAC1Q9H777 363 aaKnown RBP16.46■□□□□ 0.23
ATG4D-207ENST00000587256 GPRC5CQ9NQ84 441 aa16.46■□□□□ 0.23
ATG4D-207ENST00000587256 CHST12Q9NRB3 414 aa16.46■□□□□ 0.23
ATG4D-207ENST00000587256 MRPL42Q9Y6G3 142 aaKnown RBP16.46■□□□□ 0.23
ATG4D-207ENST00000587256 INO80B-WBP1J3KQ70 363 aa16.45■□□□□ 0.22
ATG4D-207ENST00000587256 HOXA2O43364 376 aa16.45■□□□□ 0.22
ATG4D-207ENST00000587256 STX6O43752 255 aa16.45■□□□□ 0.22
ATG4D-207ENST00000587256 LPXNO60711 386 aa16.45■□□□□ 0.22
ATG4D-207ENST00000587256 ERLIN2O94905 339 aa16.45■□□□□ 0.22
ATG4D-207ENST00000587256 FGFR1P11362 822 aa16.45■□□□□ 0.22
ATG4D-207ENST00000587256 GLRA2P23416 452 aa16.45■□□□□ 0.22
ATG4D-207ENST00000587256 ARL2P36404 184 aa16.45■□□□□ 0.22
ATG4D-207ENST00000587256 RESTQ13127 1097 aa16.45■□□□□ 0.22
ATG4D-207ENST00000587256 SF3A1Q15459 793 aaKnown RBP16.45■□□□□ 0.22
ATG4D-207ENST00000587256 ECM1Q16610 540 aa16.45■□□□□ 0.22
ATG4D-207ENST00000587256 ECHDC2Q86YB7 292 aa16.45■□□□□ 0.22
ATG4D-207ENST00000587256 ABI1Q8IZP0 508 aa16.45■□□□□ 0.22
ATG4D-207ENST00000587256 SLC17A8Q8NDX2 589 aa16.45■□□□□ 0.22
ATG4D-207ENST00000587256 CDK5RAP3Q96JB5 506 aa16.45■□□□□ 0.22
ATG4D-207ENST00000587256 MINDY3Q9H8M7 445 aa16.45■□□□□ 0.22
ATG4D-207ENST00000587256 AGPAT5Q9NUQ2 364 aa16.45■□□□□ 0.22
ATG4D-207ENST00000587256 MTMR6Q9Y217 621 aa16.45■□□□□ 0.22
ATG4D-207ENST00000587256 MTCH2Q9Y6C9 303 aa16.45■□□□□ 0.22
ATG4D-207ENST00000587256 LRRIQ4A6NIV6 560 aa16.44■□□□□ 0.22
ATG4D-207ENST00000587256 RAB27AP51159 221 aa16.44■□□□□ 0.22
ATG4D-207ENST00000587256 PTENP60484 403 aa16.44■□□□□ 0.22
ATG4D-207ENST00000587256 FAM189BP81408 668 aa16.44■□□□□ 0.22
ATG4D-207ENST00000587256 GPM6BQ13491 265 aa16.44■□□□□ 0.22
ATG4D-207ENST00000587256 SPOUT1Q5T280 376 aaKnown RBP16.44■□□□□ 0.22
ATG4D-207ENST00000587256 C11orf84Q9BUA3 381 aaPredicted RBP16.44■□□□□ 0.22
ATG4D-207ENST00000587256 DNM3Q9UQ16 869 aa16.44■□□□□ 0.22
ATG4D-207ENST00000587256 TRANK1O15050 2925 aa16.44■□□□□ 0.22
ATG4D-207ENST00000587256 A0A0U1RQF3 1178 aa16.43■□□□□ 0.22
ATG4D-207ENST00000587256 E9PMD0 336 aa16.43■□□□□ 0.22
ATG4D-207ENST00000587256 SKIP12755 728 aa16.43■□□□□ 0.22
ATG4D-207ENST00000587256 CYP11B2P19099 503 aa16.43■□□□□ 0.22
ATG4D-207ENST00000587256 POU3F3P20264 500 aaPredicted RBP16.43■□□□□ 0.22
ATG4D-207ENST00000587256 BMPR1AP36894 532 aa16.43■□□□□ 0.22
ATG4D-207ENST00000587256 SKIV2LQ15477 1246 aaKnown RBP16.43■□□□□ 0.22
ATG4D-207ENST00000587256 PTPROQ16827 1216 aa16.43■□□□□ 0.22
ATG4D-207ENST00000587256 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.43■□□□□ 0.22
ATG4D-207ENST00000587256 RASSF8Q8NHQ8 419 aa16.43■□□□□ 0.22
ATG4D-207ENST00000587256 CLP1Q92989 425 aaKnown RBP16.43■□□□□ 0.22
ATG4D-207ENST00000587256 AK8Q96MA6 479 aa16.43■□□□□ 0.22
ATG4D-207ENST00000587256 MMTAG2Q9BU76 263 aaKnown RBP16.43■□□□□ 0.22
ATG4D-207ENST00000587256 TMEM117Q9H0C3 514 aa16.43■□□□□ 0.22
ATG4D-207ENST00000587256 KIAA1671Q9BY89 1806 aa16.42■□□□□ 0.22
ATG4D-207ENST00000587256 PRRC2BQ5JSZ5 2229 aaKnown RBP16.42■□□□□ 0.22
ATG4D-207ENST00000587256 C5orf67F2Z3F1 127 aa16.42■□□□□ 0.22
ATG4D-207ENST00000587256 H3BNC9 293 aa16.42■□□□□ 0.22
ATG4D-207ENST00000587256 TSPAN1O60635 241 aa16.42■□□□□ 0.22
ATG4D-207ENST00000587256 EYA4O95677 639 aa16.42■□□□□ 0.22
ATG4D-207ENST00000587256 SSBP05455 408 aaKnown RBP eCLIP16.42■□□□□ 0.22
ATG4D-207ENST00000587256 RB1P06400 928 aa16.42■□□□□ 0.22
ATG4D-207ENST00000587256 LINC00271P0C7V0 271 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms