RNA–Protein interactions for RNA: ENST00000570758.1

CHD3-212, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 174 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-212ENST00000570758 COLGALT1Q8NBJ5 622 aa6.04□□□□□ -1.44
CHD3-212ENST00000570758 RNF169Q8NCN4 708 aa6.04□□□□□ -1.44
CHD3-212ENST00000570758 SPPL3Q8TCT6 385 aa6.04□□□□□ -1.44
CHD3-212ENST00000570758 NEK9Q8TD19 979 aa6.04□□□□□ -1.44
CHD3-212ENST00000570758 ASAP3Q8TDY4 903 aa6.04□□□□□ -1.44
CHD3-212ENST00000570758 PIGOQ8TEQ8 1089 aa6.04□□□□□ -1.44
CHD3-212ENST00000570758 POF1BQ8WVV4 589 aa6.04□□□□□ -1.44
CHD3-212ENST00000570758 PRPF31Q8WWY3 499 aaKnown RBP6.04□□□□□ -1.44
CHD3-212ENST00000570758 PSPC1Q8WXF1 523 aaKnown RBP6.04□□□□□ -1.44
CHD3-212ENST00000570758 SLC7A3Q8WY07 619 aa6.04□□□□□ -1.44
CHD3-212ENST00000570758 P2RX5Q93086 422 aa6.04□□□□□ -1.44
CHD3-212ENST00000570758 CASD1Q96PB1 797 aa6.04□□□□□ -1.44
CHD3-212ENST00000570758 JPH2Q9BR39 696 aaPredicted RBP6.04□□□□□ -1.44
CHD3-212ENST00000570758 PLVAPQ9BX97 442 aa6.04□□□□□ -1.44
CHD3-212ENST00000570758 TMEM117Q9H0C3 514 aa6.04□□□□□ -1.44
CHD3-212ENST00000570758 LMAN2LQ9H0V9 348 aa6.04□□□□□ -1.44
CHD3-212ENST00000570758 NSUN3Q9H649 340 aaKnown RBP6.04□□□□□ -1.44
CHD3-212ENST00000570758 MINDY3Q9H8M7 445 aa6.04□□□□□ -1.44
CHD3-212ENST00000570758 IFT122Q9HBG6 1241 aa6.04□□□□□ -1.44
CHD3-212ENST00000570758 ANKEF1Q9NU02 776 aa6.04□□□□□ -1.44
CHD3-212ENST00000570758 TYW1Q9NV66 732 aaKnown RBP6.04□□□□□ -1.44
CHD3-212ENST00000570758 RWDD3Q9Y3V2 267 aa6.04□□□□□ -1.44
CHD3-212ENST00000570758 PPME1Q9Y570 386 aa6.04□□□□□ -1.44
CHD3-212ENST00000570758 PCDHGC5Q9Y5F6 944 aa6.04□□□□□ -1.44
CHD3-212ENST00000570758 COL4A3BPQ9Y5P4 624 aa6.04□□□□□ -1.44
CHD3-212ENST00000570758 EYSQ5T1H1 3165 aa6.03□□□□□ -1.44
CHD3-212ENST00000570758 FNDC1Q4ZHG4 1894 aaPredicted RBP6.03□□□□□ -1.44
CHD3-212ENST00000570758 A0A0U1RQF3 1178 aa6.03□□□□□ -1.44
CHD3-212ENST00000570758 MEIS3P2A8K0S8 358 aa6.03□□□□□ -1.44
CHD3-212ENST00000570758 LINC01565O15544 149 aa6.03□□□□□ -1.44
CHD3-212ENST00000570758 GAS2O43903 313 aaKnown RBP6.03□□□□□ -1.44
CHD3-212ENST00000570758 ST18O60284 1047 aa6.03□□□□□ -1.44
CHD3-212ENST00000570758 USO1O60763 962 aaKnown RBP6.03□□□□□ -1.44
CHD3-212ENST00000570758 OR52Z1P0C646 297 aa6.03□□□□□ -1.44
CHD3-212ENST00000570758 KCNA5P22460 613 aa6.03□□□□□ -1.44
CHD3-212ENST00000570758 U2AF2P26368 475 aaKnown RBP eCLIP6.03□□□□□ -1.44
CHD3-212ENST00000570758 HOXA11P31270 313 aaPredicted RBP6.03□□□□□ -1.44
CHD3-212ENST00000570758 ARL2P36404 184 aa6.03□□□□□ -1.44
CHD3-212ENST00000570758 PBX3P40426 434 aa6.03□□□□□ -1.44
CHD3-212ENST00000570758 PHKA2P46019 1235 aa6.03□□□□□ -1.44
CHD3-212ENST00000570758 RARRES1P49788 294 aa6.03□□□□□ -1.44
CHD3-212ENST00000570758 CDC42EP1Q00587 391 aa6.03□□□□□ -1.44
CHD3-212ENST00000570758 ORC2Q13416 577 aaPredicted RBP6.03□□□□□ -1.44
CHD3-212ENST00000570758 ECM1Q16610 540 aa6.03□□□□□ -1.44
CHD3-212ENST00000570758 AAK1Q2M2I8 961 aa6.03□□□□□ -1.44
CHD3-212ENST00000570758 LEXMQ3ZCV2 418 aa6.03□□□□□ -1.44
CHD3-212ENST00000570758 LONRF3Q496Y0 759 aa6.03□□□□□ -1.44
CHD3-212ENST00000570758 NAALADL2Q58DX5 795 aa6.03□□□□□ -1.44
CHD3-212ENST00000570758 UBXN11Q5T124 520 aa6.03□□□□□ -1.44
CHD3-212ENST00000570758 POTEGQ6S5H5 508 aa6.03□□□□□ -1.44
CHD3-212ENST00000570758 CATSPER4Q7RTX7 472 aa6.03□□□□□ -1.44
CHD3-212ENST00000570758 SRGAP1Q7Z6B7 1085 aa6.03□□□□□ -1.44
CHD3-212ENST00000570758 ADGRD2Q7Z7M1 963 aa6.03□□□□□ -1.44
CHD3-212ENST00000570758 CATSPER3Q86XQ3 398 aa6.03□□□□□ -1.44
CHD3-212ENST00000570758 RNF149Q8NC42 400 aa6.03□□□□□ -1.44
CHD3-212ENST00000570758 IL27Q8NEV9 243 aa6.03□□□□□ -1.44
CHD3-212ENST00000570758 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.03□□□□□ -1.44
CHD3-212ENST00000570758 HELQQ8TDG4 1101 aa6.03□□□□□ -1.44
CHD3-212ENST00000570758 TCP11Q8WWU5 503 aa6.03□□□□□ -1.44
CHD3-212ENST00000570758 LPPQ93052 612 aa6.03□□□□□ -1.44
CHD3-212ENST00000570758 UHRF1Q96T88 793 aaPredicted RBP6.03□□□□□ -1.44
CHD3-212ENST00000570758 MTRQ99707 1265 aa6.03□□□□□ -1.44
CHD3-212ENST00000570758 TRAIPQ9BWF2 469 aa6.03□□□□□ -1.44
CHD3-212ENST00000570758 POLR3FQ9H1D9 316 aaPredicted RBP6.03□□□□□ -1.44
CHD3-212ENST00000570758 UPF2Q9HAU5 1272 aaKnown RBP6.03□□□□□ -1.44
CHD3-212ENST00000570758 TUFT1Q9NNX1 390 aa6.03□□□□□ -1.44
CHD3-212ENST00000570758 GPRC5CQ9NQ84 441 aa6.03□□□□□ -1.44
CHD3-212ENST00000570758 CHST12Q9NRB3 414 aa6.03□□□□□ -1.44
CHD3-212ENST00000570758 AGPAT5Q9NUQ2 364 aa6.03□□□□□ -1.44
CHD3-212ENST00000570758 RNF216Q9NWF9 866 aaPredicted RBP6.03□□□□□ -1.44
CHD3-212ENST00000570758 PIN4Q9Y237 131 aaKnown RBP6.03□□□□□ -1.44
CHD3-212ENST00000570758 PCDHB6Q9Y5E3 794 aa6.03□□□□□ -1.44
CHD3-212ENST00000570758 TCF20Q9UGU0 1960 aaKnown RBP6.03□□□□□ -1.44
CHD3-212ENST00000570758 ARID2Q68CP9 1835 aa6.03□□□□□ -1.44
CHD3-212ENST00000570758 MYO7AQ13402 2215 aa6.02□□□□□ -1.45
CHD3-212ENST00000570758 H3BQ06 376 aaPredicted RBP6.02□□□□□ -1.45
CHD3-212ENST00000570758 TNFRSF10AO00220 468 aa6.02□□□□□ -1.45
CHD3-212ENST00000570758 FSCN2O14926 492 aa6.02□□□□□ -1.45
CHD3-212ENST00000570758 ASAP2O43150 1006 aa6.02□□□□□ -1.45
CHD3-212ENST00000570758 HOXA2O43364 376 aa6.02□□□□□ -1.45
CHD3-212ENST00000570758 OFD1O75665 1012 aa6.02□□□□□ -1.45
CHD3-212ENST00000570758 FGF18O76093 207 aa6.02□□□□□ -1.45
CHD3-212ENST00000570758 EOMESO95936 686 aa6.02□□□□□ -1.45
CHD3-212ENST00000570758 XRCC6P12956 609 aaKnown RBP eCLIP6.02□□□□□ -1.45
CHD3-212ENST00000570758 LAG3P18627 525 aa6.02□□□□□ -1.45
CHD3-212ENST00000570758 SFPQP23246 707 aaKnown RBP eCLIP6.02□□□□□ -1.45
CHD3-212ENST00000570758 GLRA2P23416 452 aa6.02□□□□□ -1.45
CHD3-212ENST00000570758 RPA1P27694 616 aa6.02□□□□□ -1.45
CHD3-212ENST00000570758 GJB2P29033 226 aa6.02□□□□□ -1.45
CHD3-212ENST00000570758 LTBRP36941 435 aa6.02□□□□□ -1.45
CHD3-212ENST00000570758 TRAPPC10P48553 1259 aa6.02□□□□□ -1.45
CHD3-212ENST00000570758 MCM2P49736 904 aa6.02□□□□□ -1.45
CHD3-212ENST00000570758 FXR2P51116 673 aaKnown RBP eCLIP6.02□□□□□ -1.45
CHD3-212ENST00000570758 PTENP60484 403 aa6.02□□□□□ -1.45
CHD3-212ENST00000570758 ERVFC1P60507 584 aa6.02□□□□□ -1.45
CHD3-212ENST00000570758 DLX2Q07687 328 aaPredicted RBP6.02□□□□□ -1.45
CHD3-212ENST00000570758 PTGDRQ13258 359 aa6.02□□□□□ -1.45
CHD3-212ENST00000570758 GNL2Q13823 731 aaKnown RBP6.02□□□□□ -1.45
CHD3-212ENST00000570758 CAPSQ13938 189 aa6.02□□□□□ -1.45
CHD3-212ENST00000570758 IL17AQ16552 155 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms