RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 RFFLQ8WZ73 363 aa11.71□□□□□ -0.54
PALB2-206ENST00000568219 KLF6Q99612 283 aaPredicted RBP11.71□□□□□ -0.54
PALB2-206ENST00000568219 MTA3Q9BTC8 594 aa11.71□□□□□ -0.54
PALB2-206ENST00000568219 THAP2Q9H0W7 228 aa11.71□□□□□ -0.54
PALB2-206ENST00000568219 CASP4P49662 377 aa11.7□□□□□ -0.54
PALB2-206ENST00000568219 LAMB3Q13751 1172 aa11.7□□□□□ -0.54
PALB2-206ENST00000568219 ODR4Q5SWX8 454 aa11.7□□□□□ -0.54
PALB2-206ENST00000568219 C3orf20Q8ND61 904 aa11.7□□□□□ -0.54
PALB2-206ENST00000568219 ACTRT1Q8TDG2 376 aa11.7□□□□□ -0.54
PALB2-206ENST00000568219 SHISA4Q96DD7 197 aa11.7□□□□□ -0.54
PALB2-206ENST00000568219 PURBQ96QR8 312 aaKnown RBP11.7□□□□□ -0.54
PALB2-206ENST00000568219 UBN1Q9NPG3 1134 aa11.7□□□□□ -0.54
PALB2-206ENST00000568219 AGAP1Q9UPQ3 857 aa11.7□□□□□ -0.54
PALB2-206ENST00000568219 PCDHA1Q9Y5I3 950 aa11.7□□□□□ -0.54
PALB2-206ENST00000568219 NVLO15381 856 aaKnown RBP11.7□□□□□ -0.54
PALB2-206ENST00000568219 PJA2O43164 708 aa11.7□□□□□ -0.54
PALB2-206ENST00000568219 SNX3O60493 162 aa11.7□□□□□ -0.54
PALB2-206ENST00000568219 CBX6O95503 412 aa11.7□□□□□ -0.54
PALB2-206ENST00000568219 ITIH4Q14624 930 aa11.7□□□□□ -0.54
PALB2-206ENST00000568219 CHADLQ6NUI6 762 aa11.7□□□□□ -0.54
PALB2-206ENST00000568219 DPP8Q6V1X1 898 aaPredicted RBP11.7□□□□□ -0.54
PALB2-206ENST00000568219 RNF207Q6ZRF8 634 aa11.7□□□□□ -0.54
PALB2-206ENST00000568219 RAB3IL1Q8TBN0 382 aa11.7□□□□□ -0.54
PALB2-206ENST00000568219 CEP63Q96MT8 703 aa11.7□□□□□ -0.54
PALB2-206ENST00000568219 SAYSD1Q9NPB0 183 aa11.7□□□□□ -0.54
PALB2-206ENST00000568219 SLC12A6Q9UHW9 1150 aa11.7□□□□□ -0.54
PALB2-206ENST00000568219 RIMBP2O15034 1052 aa11.7□□□□□ -0.54
PALB2-206ENST00000568219 MGRN1O60291 552 aa11.7□□□□□ -0.54
PALB2-206ENST00000568219 ENTPD5O75356 428 aa11.7□□□□□ -0.54
PALB2-206ENST00000568219 ATP4AP20648 1035 aa11.7□□□□□ -0.54
PALB2-206ENST00000568219 GSTO1P78417 241 aa11.7□□□□□ -0.54
PALB2-206ENST00000568219 MAPK7Q13164 816 aa11.7□□□□□ -0.54
PALB2-206ENST00000568219 WLSQ5T9L3 541 aa11.7□□□□□ -0.54
PALB2-206ENST00000568219 ISLR2Q6UXK2 745 aa11.7□□□□□ -0.54
PALB2-206ENST00000568219 FAM228AQ86W67 206 aa11.7□□□□□ -0.54
PALB2-206ENST00000568219 ATG4AQ8WYN0 398 aa11.7□□□□□ -0.54
PALB2-206ENST00000568219 RPS6KC1Q96S38 1066 aa11.7□□□□□ -0.54
PALB2-206ENST00000568219 SH3GLB2Q9NR46 395 aa11.7□□□□□ -0.54
PALB2-206ENST00000568219 CTDP1Q9Y5B0 961 aaPredicted RBP11.7□□□□□ -0.54
PALB2-206ENST00000568219 ADAMTS2O95450 1211 aa11.69□□□□□ -0.54
PALB2-206ENST00000568219 PCP11498 1178 aaKnown RBP11.69□□□□□ -0.54
PALB2-206ENST00000568219 CREB1P16220 341 aa11.69□□□□□ -0.54
PALB2-206ENST00000568219 CHRNA3P32297 505 aa11.69□□□□□ -0.54
PALB2-206ENST00000568219 PSMC2P35998 433 aaKnown RBP11.69□□□□□ -0.54
PALB2-206ENST00000568219 MYL7Q01449 175 aa11.69□□□□□ -0.54
PALB2-206ENST00000568219 KRT17Q04695 432 aa11.69□□□□□ -0.54
PALB2-206ENST00000568219 CUL3Q13618 768 aa11.69□□□□□ -0.54
PALB2-206ENST00000568219 CTTNQ14247 550 aaKnown RBP11.69□□□□□ -0.54
PALB2-206ENST00000568219 BICD1Q96G01 975 aa11.69□□□□□ -0.54
PALB2-206ENST00000568219 FAXDC2Q96IV6 333 aa11.69□□□□□ -0.54
PALB2-206ENST00000568219 SETDB2Q96T68 719 aa11.69□□□□□ -0.54
PALB2-206ENST00000568219 POP1Q99575 1024 aaKnown RBP11.69□□□□□ -0.54
PALB2-206ENST00000568219 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.69□□□□□ -0.54
PALB2-206ENST00000568219 PCDHGC5Q9Y5F6 944 aa11.69□□□□□ -0.54
PALB2-206ENST00000568219 TMEM131LA2VDJ0 1609 aa11.69□□□□□ -0.54
PALB2-206ENST00000568219 ADAMTS13Q76LX8 1427 aa11.69□□□□□ -0.54
PALB2-206ENST00000568219 KDM3AQ9Y4C1 1321 aa11.69□□□□□ -0.54
PALB2-206ENST00000568219 FAM187AA6NFU0 413 aa11.69□□□□□ -0.54
PALB2-206ENST00000568219 ASAP2O43150 1006 aa11.69□□□□□ -0.54
PALB2-206ENST00000568219 YY1P25490 414 aa11.69□□□□□ -0.54
PALB2-206ENST00000568219 EPHB2P29323 1055 aa11.69□□□□□ -0.54
PALB2-206ENST00000568219 TRIM28Q13263 835 aaKnown RBP11.69□□□□□ -0.54
PALB2-206ENST00000568219 TMED1Q13445 227 aa11.69□□□□□ -0.54
PALB2-206ENST00000568219 KNOP1Q1ED39 458 aaKnown RBP11.69□□□□□ -0.54
PALB2-206ENST00000568219 MAML1Q92585 1016 aa11.69□□□□□ -0.54
PALB2-206ENST00000568219 FAM161BQ96MY7 647 aa11.69□□□□□ -0.54
PALB2-206ENST00000568219 DDX50Q9BQ39 737 aaKnown RBP11.69□□□□□ -0.54
PALB2-206ENST00000568219 PPIP5K2O43314 1243 aa11.69□□□□□ -0.54
PALB2-206ENST00000568219 PLS3P13797 630 aa11.69□□□□□ -0.54
PALB2-206ENST00000568219 HSPA1LP34931 641 aa11.69□□□□□ -0.54
PALB2-206ENST00000568219 SERPINB6P35237 376 aa11.69□□□□□ -0.54
PALB2-206ENST00000568219 GCLMP48507 274 aa11.69□□□□□ -0.54
PALB2-206ENST00000568219 SPARCL1Q14515 664 aa11.69□□□□□ -0.54
PALB2-206ENST00000568219 ZNF483Q8TF39 744 aaPredicted RBP11.69□□□□□ -0.54
PALB2-206ENST00000568219 ETAA1Q9NY74 926 aa11.69□□□□□ -0.54
PALB2-206ENST00000568219 GGA2Q9UJY4 613 aa11.69□□□□□ -0.54
PALB2-206ENST00000568219 C2CD2Q9Y426 696 aa11.69□□□□□ -0.54
PALB2-206ENST00000568219 GOLGA8IPA6NC78 632 aa11.69□□□□□ -0.54
PALB2-206ENST00000568219 GOLGA8JA6NMD2 632 aa11.69□□□□□ -0.54
PALB2-206ENST00000568219 CFBP00751 764 aa11.69□□□□□ -0.54
PALB2-206ENST00000568219 GSTA1P08263 222 aa11.69□□□□□ -0.54
PALB2-206ENST00000568219 MYBP10242 640 aa11.69□□□□□ -0.54
PALB2-206ENST00000568219 MAPK4P31152 587 aa11.69□□□□□ -0.54
PALB2-206ENST00000568219 SSTR3P32745 418 aaPredicted RBP11.69□□□□□ -0.54
PALB2-206ENST00000568219 NCALDP61601 193 aa11.69□□□□□ -0.54
PALB2-206ENST00000568219 IRX4P78413 519 aa11.69□□□□□ -0.54
PALB2-206ENST00000568219 SP4Q02446 784 aa11.69□□□□□ -0.54
PALB2-206ENST00000568219 RCN1Q15293 331 aa11.69□□□□□ -0.54
PALB2-206ENST00000568219 HGSNATQ68CP4 663 aa11.69□□□□□ -0.54
PALB2-206ENST00000568219 C6orf89Q6UWU4 347 aa11.69□□□□□ -0.54
PALB2-206ENST00000568219 ZNF662Q6ZS27 426 aa11.69□□□□□ -0.54
PALB2-206ENST00000568219 SLC30A5Q8TAD4 765 aa11.69□□□□□ -0.54
PALB2-206ENST00000568219 JDP2Q8WYK2 163 aa11.69□□□□□ -0.54
PALB2-206ENST00000568219 TTC17Q96AE7 1141 aa11.69□□□□□ -0.54
PALB2-206ENST00000568219 CEP95Q96GE4 821 aa11.69□□□□□ -0.54
PALB2-206ENST00000568219 SUCLA2Q9P2R7 463 aaPredicted RBP11.69□□□□□ -0.54
PALB2-206ENST00000568219 MYH8P13535 1937 aa11.68□□□□□ -0.54
PALB2-206ENST00000568219 GH1P01241 217 aa11.68□□□□□ -0.54
PALB2-206ENST00000568219 KITP10721 976 aa11.68□□□□□ -0.54
PALB2-206ENST00000568219 COMTP21964 271 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms