RNA–Protein interactions for RNA: ENST00000566119.5

EDC3-209, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 4

Gene EDC3, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-209ENST00000566119 RNF19AQ9NV58 838 aa22.98■■□□□ 1.27
EDC3-209ENST00000566119 CUL9Q8IWT3 2517 aa22.98■■□□□ 1.27
EDC3-209ENST00000566119 A0A087WWV3 80 aa22.97■■□□□ 1.27
EDC3-209ENST00000566119 POTEMA6NI47 508 aa22.97■■□□□ 1.27
EDC3-209ENST00000566119 CD2BP2O95400 341 aaKnown RBP22.97■■□□□ 1.27
EDC3-209ENST00000566119 SRGAP2CP0DJJ0 459 aa22.97■■□□□ 1.27
EDC3-209ENST00000566119 SFPQP23246 707 aaKnown RBP eCLIP22.97■■□□□ 1.27
EDC3-209ENST00000566119 EMC2Q15006 297 aa22.97■■□□□ 1.27
EDC3-209ENST00000566119 SPOUT1Q5T280 376 aaKnown RBP22.97■■□□□ 1.27
EDC3-209ENST00000566119 RNF169Q8NCN4 708 aa22.97■■□□□ 1.27
EDC3-209ENST00000566119 CASD1Q96PB1 797 aa22.97■■□□□ 1.27
EDC3-209ENST00000566119 TMEM117Q9H0C3 514 aa22.97■■□□□ 1.27
EDC3-209ENST00000566119 ANKEF1Q9NU02 776 aa22.97■■□□□ 1.27
EDC3-209ENST00000566119 DACT1Q9NYF0 836 aa22.97■■□□□ 1.27
EDC3-209ENST00000566119 HCSTQ9UBK5 93 aa22.97■■□□□ 1.27
EDC3-209ENST00000566119 HOXA2O43364 376 aa22.96■■□□□ 1.27
EDC3-209ENST00000566119 GAS2O43903 313 aaKnown RBP22.96■■□□□ 1.27
EDC3-209ENST00000566119 CSPG5O95196 566 aa22.96■■□□□ 1.27
EDC3-209ENST00000566119 EOMESO95936 686 aa22.96■■□□□ 1.27
EDC3-209ENST00000566119 DNAJB1P25685 340 aa22.96■■□□□ 1.27
EDC3-209ENST00000566119 U2AF2P26368 475 aaKnown RBP eCLIP22.96■■□□□ 1.27
EDC3-209ENST00000566119 TECP42680 631 aa22.96■■□□□ 1.27
EDC3-209ENST00000566119 LAMTOR4Q0VGL1 99 aa22.96■■□□□ 1.27
EDC3-209ENST00000566119 ORC2Q13416 577 aaPredicted RBP22.96■■□□□ 1.27
EDC3-209ENST00000566119 TTC38Q5R3I4 469 aa22.96■■□□□ 1.27
EDC3-209ENST00000566119 CATSPER4Q7RTX7 472 aa22.96■■□□□ 1.27
EDC3-209ENST00000566119 ZNF598Q86UK7 904 aaKnown RBP22.96■■□□□ 1.27
EDC3-209ENST00000566119 PIGOQ8TEQ8 1089 aa22.96■■□□□ 1.27
EDC3-209ENST00000566119 TCP11Q8WWU5 503 aa22.96■■□□□ 1.27
EDC3-209ENST00000566119 TMX3Q96JJ7 454 aa22.96■■□□□ 1.27
EDC3-209ENST00000566119 UHRF1Q96T88 793 aaPredicted RBP22.96■■□□□ 1.27
EDC3-209ENST00000566119 CWH43Q9H720 699 aa22.96■■□□□ 1.27
EDC3-209ENST00000566119 AAASQ9NRG9 546 aa22.96■■□□□ 1.27
EDC3-209ENST00000566119 PCDHB12Q9Y5F1 795 aa22.96■■□□□ 1.27
EDC3-209ENST00000566119 ASAP2O43150 1006 aa22.95■■□□□ 1.26
EDC3-209ENST00000566119 OR52Z1P0C646 297 aa22.95■■□□□ 1.26
EDC3-209ENST00000566119 SPATA31C1P0DKV0 1188 aa22.95■■□□□ 1.26
EDC3-209ENST00000566119 KCNA5P22460 613 aa22.95■■□□□ 1.26
EDC3-209ENST00000566119 LRRC55Q6ZSA7 311 aa22.95■■□□□ 1.26
EDC3-209ENST00000566119 FERMT3Q86UX7 667 aa22.95■■□□□ 1.26
EDC3-209ENST00000566119 TBC1D32Q96NH3 1257 aa22.95■■□□□ 1.26
EDC3-209ENST00000566119 NECAB3Q96P71 396 aaPredicted RBP22.95■■□□□ 1.26
EDC3-209ENST00000566119 MTRQ99707 1265 aa22.95■■□□□ 1.26
EDC3-209ENST00000566119 XPNPEP1Q9NQW7 623 aa22.95■■□□□ 1.26
EDC3-209ENST00000566119 PIN4Q9Y237 131 aaKnown RBP22.95■■□□□ 1.26
EDC3-209ENST00000566119 XRCC6P12956 609 aaKnown RBP eCLIP22.94■■□□□ 1.26
EDC3-209ENST00000566119 ATF7P17544 494 aaPredicted RBP22.94■■□□□ 1.26
EDC3-209ENST00000566119 TRAPPC10P48553 1259 aa22.94■■□□□ 1.26
EDC3-209ENST00000566119 RARRES1P49788 294 aa22.94■■□□□ 1.26
EDC3-209ENST00000566119 NBR1Q14596 966 aa22.94■■□□□ 1.26
EDC3-209ENST00000566119 SRGAP1Q7Z6B7 1085 aa22.94■■□□□ 1.26
EDC3-209ENST00000566119 CATSPER3Q86XQ3 398 aa22.94■■□□□ 1.26
EDC3-209ENST00000566119 ABI1Q8IZP0 508 aa22.94■■□□□ 1.26
EDC3-209ENST00000566119 C4orf32Q8N8J7 132 aa22.94■■□□□ 1.26
EDC3-209ENST00000566119 POF1BQ8WVV4 589 aa22.94■■□□□ 1.26
EDC3-209ENST00000566119 TRAIPQ9BWF2 469 aa22.94■■□□□ 1.26
EDC3-209ENST00000566119 MINDY3Q9H8M7 445 aa22.94■■□□□ 1.26
EDC3-209ENST00000566119 NOL7Q9UMY1 257 aaKnown RBP22.94■■□□□ 1.26
EDC3-209ENST00000566119 TNFRSF10AO00220 468 aa22.93■■□□□ 1.26
EDC3-209ENST00000566119 MED24O75448 989 aa22.93■■□□□ 1.26
EDC3-209ENST00000566119 PHKA2P46019 1235 aa22.93■■□□□ 1.26
EDC3-209ENST00000566119 TOB1P50616 345 aaPredicted RBP22.93■■□□□ 1.26
EDC3-209ENST00000566119 COL19A1Q14993 1142 aa22.93■■□□□ 1.26
EDC3-209ENST00000566119 CLLU1OSQ5K130 101 aa22.93■■□□□ 1.26
EDC3-209ENST00000566119 TWF2Q6IBS0 349 aaKnown RBP22.93■■□□□ 1.26
EDC3-209ENST00000566119 COLGALT1Q8NBJ5 622 aa22.93■■□□□ 1.26
EDC3-209ENST00000566119 RNF149Q8NC42 400 aa22.93■■□□□ 1.26
EDC3-209ENST00000566119 PABPC5Q96DU9 382 aaKnown RBP22.93■■□□□ 1.26
EDC3-209ENST00000566119 TUFT1Q9NNX1 390 aa22.93■■□□□ 1.26
EDC3-209ENST00000566119 KIF3AQ9Y496 699 aa22.93■■□□□ 1.26
EDC3-209ENST00000566119 RALGAPA2Q2PPJ7 1873 aa22.93■■□□□ 1.26
EDC3-209ENST00000566119 DGAT1O75907 488 aa22.92■■□□□ 1.26
EDC3-209ENST00000566119 IRS1P35568 1242 aa22.92■■□□□ 1.26
EDC3-209ENST00000566119 HYAL1Q12794 435 aa22.92■■□□□ 1.26
EDC3-209ENST00000566119 MXD4Q14582 209 aaPredicted RBP22.92■■□□□ 1.26
EDC3-209ENST00000566119 LEXMQ3ZCV2 418 aa22.92■■□□□ 1.26
EDC3-209ENST00000566119 EP400NLQ6ZTU2 488 aa22.92■■□□□ 1.26
EDC3-209ENST00000566119 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.92■■□□□ 1.26
EDC3-209ENST00000566119 HELQQ8TDG4 1101 aa22.92■■□□□ 1.26
EDC3-209ENST00000566119 CCDC43Q96MW1 224 aaKnown RBP22.92■■□□□ 1.26
EDC3-209ENST00000566119 POLR3CQ9BUI4 534 aaPredicted RBP22.92■■□□□ 1.26
EDC3-209ENST00000566119 NLRC5Q86WI3 1866 aa22.92■■□□□ 1.26
EDC3-209ENST00000566119 NCK2O43639 380 aa22.91■■□□□ 1.26
EDC3-209ENST00000566119 FGF18O76093 207 aa22.91■■□□□ 1.26
EDC3-209ENST00000566119 SKIP12755 728 aa22.91■■□□□ 1.26
EDC3-209ENST00000566119 LAG3P18627 525 aa22.91■■□□□ 1.26
EDC3-209ENST00000566119 ARL2P36404 184 aa22.91■■□□□ 1.26
EDC3-209ENST00000566119 MCM2P49736 904 aa22.91■■□□□ 1.26
EDC3-209ENST00000566119 LONRF3Q496Y0 759 aa22.91■■□□□ 1.26
EDC3-209ENST00000566119 THNSL1Q8IYQ7 743 aa22.91■■□□□ 1.26
EDC3-209ENST00000566119 AGPAT5Q9NUQ2 364 aa22.91■■□□□ 1.26
EDC3-209ENST00000566119 FAM105AQ9NUU6 356 aa22.91■■□□□ 1.26
EDC3-209ENST00000566119 CLDND1Q9NY35 253 aa22.91■■□□□ 1.26
EDC3-209ENST00000566119 H3BQ06 376 aaPredicted RBP22.9■■□□□ 1.26
EDC3-209ENST00000566119 ZNF623O75123 536 aa22.9■■□□□ 1.26
EDC3-209ENST00000566119 RPA1P27694 616 aa22.9■■□□□ 1.26
EDC3-209ENST00000566119 HOXA11P31270 313 aaPredicted RBP22.9■■□□□ 1.26
EDC3-209ENST00000566119 GTF2F1P35269 517 aaKnown RBP eCLIP22.9■■□□□ 1.26
EDC3-209ENST00000566119 CSPP1Q1MSJ5 1256 aa22.9■■□□□ 1.26
EDC3-209ENST00000566119 CTC1Q2NKJ3 1217 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms