RNA–Protein interactions for RNA: ENST00000552374.6

TMEM116-215, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM116, Length 1,408 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-215ENST00000552374 EVPLQ92817 2033 aa12.17□□□□□ -0.46
TMEM116-215ENST00000552374 PTPRSQ13332 1948 aa12.17□□□□□ -0.46
TMEM116-215ENST00000552374 TRANK1O15050 2925 aa12.17□□□□□ -0.46
TMEM116-215ENST00000552374 MYH9P35579 1960 aaKnown RBP12.17□□□□□ -0.46
TMEM116-215ENST00000552374 A0A0U1RQF3 1178 aa12.17□□□□□ -0.46
TMEM116-215ENST00000552374 H3BQV1 296 aa12.17□□□□□ -0.46
TMEM116-215ENST00000552374 ASAP2O43150 1006 aa12.17□□□□□ -0.46
TMEM116-215ENST00000552374 ITGB1P05556 798 aa12.17□□□□□ -0.46
TMEM116-215ENST00000552374 SPATA31C1P0DKV0 1188 aa12.17□□□□□ -0.46
TMEM116-215ENST00000552374 U2AF2P26368 475 aaKnown RBP eCLIP12.17□□□□□ -0.462e-6■■□□□ 11.9
TMEM116-215ENST00000552374 GJB2P29033 226 aa12.17□□□□□ -0.46
TMEM116-215ENST00000552374 TRAPPC10P48553 1259 aa12.17□□□□□ -0.46
TMEM116-215ENST00000552374 KCNQ1P51787 676 aa12.17□□□□□ -0.46
TMEM116-215ENST00000552374 LONRF3Q496Y0 759 aa12.17□□□□□ -0.46
TMEM116-215ENST00000552374 TCEAL5Q5H9L2 206 aa12.17□□□□□ -0.46
TMEM116-215ENST00000552374 TWF2Q6IBS0 349 aaKnown RBP12.17□□□□□ -0.46
TMEM116-215ENST00000552374 MAEAQ7L5Y9 396 aa12.17□□□□□ -0.46
TMEM116-215ENST00000552374 CATSPER3Q86XQ3 398 aa12.17□□□□□ -0.46
TMEM116-215ENST00000552374 RNF149Q8NC42 400 aa12.17□□□□□ -0.46
TMEM116-215ENST00000552374 MTRQ99707 1265 aa12.17□□□□□ -0.46
TMEM116-215ENST00000552374 CHST12Q9NRB3 414 aa12.17□□□□□ -0.46
TMEM116-215ENST00000552374 AAASQ9NRG9 546 aa12.17□□□□□ -0.46
TMEM116-215ENST00000552374 ANKEF1Q9NU02 776 aa12.17□□□□□ -0.46
TMEM116-215ENST00000552374 SMC3Q9UQE7 1217 aa12.17□□□□□ -0.46
TMEM116-215ENST00000552374 PIN4Q9Y237 131 aaKnown RBP12.17□□□□□ -0.46
TMEM116-215ENST00000552374 PCDHB12Q9Y5F1 795 aa12.17□□□□□ -0.46
TMEM116-215ENST00000552374 REV3LO60673 3130 aa12.16□□□□□ -0.46
TMEM116-215ENST00000552374 CUL9Q8IWT3 2517 aa12.16□□□□□ -0.46
TMEM116-215ENST00000552374 HOXA2O43364 376 aa12.16□□□□□ -0.46
TMEM116-215ENST00000552374 GAS2O43903 313 aaKnown RBP12.16□□□□□ -0.46
TMEM116-215ENST00000552374 MED24O75448 989 aa12.16□□□□□ -0.46
TMEM116-215ENST00000552374 LYPLA2O95372 231 aa12.16□□□□□ -0.46
TMEM116-215ENST00000552374 EOMESO95936 686 aa12.16□□□□□ -0.46
TMEM116-215ENST00000552374 BMP1P13497 986 aa12.16□□□□□ -0.46
TMEM116-215ENST00000552374 RARRES1P49788 294 aa12.16□□□□□ -0.46
TMEM116-215ENST00000552374 TOB1P50616 345 aaPredicted RBP12.16□□□□□ -0.46
TMEM116-215ENST00000552374 PTGDRQ13258 359 aa12.16□□□□□ -0.46
TMEM116-215ENST00000552374 ORC2Q13416 577 aaPredicted RBP12.16□□□□□ -0.46
TMEM116-215ENST00000552374 TIGD5Q53EQ6 642 aa12.16□□□□□ -0.46
TMEM116-215ENST00000552374 NAALADL2Q58DX5 795 aa12.16□□□□□ -0.46
TMEM116-215ENST00000552374 SRGAP1Q7Z6B7 1085 aa12.16□□□□□ -0.46
TMEM116-215ENST00000552374 FERMT3Q86UX7 667 aa12.16□□□□□ -0.46
TMEM116-215ENST00000552374 C4orf32Q8N8J7 132 aa12.16□□□□□ -0.46
TMEM116-215ENST00000552374 ERMNQ8TAM6 284 aa12.16□□□□□ -0.46
TMEM116-215ENST00000552374 SPPL3Q8TCT6 385 aa12.16□□□□□ -0.46
TMEM116-215ENST00000552374 MICAL1Q8TDZ2 1067 aa12.16□□□□□ -0.46
TMEM116-215ENST00000552374 CASD1Q96PB1 797 aa12.16□□□□□ -0.46
TMEM116-215ENST00000552374 TMEM117Q9H0C3 514 aa12.16□□□□□ -0.46
TMEM116-215ENST00000552374 NSUN3Q9H649 340 aaKnown RBP12.16□□□□□ -0.46
TMEM116-215ENST00000552374 IGFLR1Q9H665 355 aa12.16□□□□□ -0.46
TMEM116-215ENST00000552374 MINDY3Q9H8M7 445 aa12.16□□□□□ -0.46
TMEM116-215ENST00000552374 TUFT1Q9NNX1 390 aa12.16□□□□□ -0.46
TMEM116-215ENST00000552374 HCSTQ9UBK5 93 aa12.16□□□□□ -0.46
TMEM116-215ENST00000552374 PCDHB6Q9Y5E3 794 aa12.16□□□□□ -0.46
TMEM116-215ENST00000552374 USO1O60763 962 aaKnown RBP12.15□□□□□ -0.46
TMEM116-215ENST00000552374 DGAT1O75907 488 aa12.15□□□□□ -0.46
TMEM116-215ENST00000552374 XRCC6P12956 609 aaKnown RBP eCLIP12.15□□□□□ -0.46
TMEM116-215ENST00000552374 KCNA5P22460 613 aa12.15□□□□□ -0.46
TMEM116-215ENST00000552374 DNAJB1P25685 340 aa12.15□□□□□ -0.46
TMEM116-215ENST00000552374 PHKA2P46019 1235 aa12.15□□□□□ -0.46
TMEM116-215ENST00000552374 MXD4Q14582 209 aaPredicted RBP12.15□□□□□ -0.46
TMEM116-215ENST00000552374 LARP1BQ659C4 914 aaKnown RBP12.15□□□□□ -0.46
TMEM116-215ENST00000552374 LRRC55Q6ZSA7 311 aa12.15□□□□□ -0.46
TMEM116-215ENST00000552374 THNSL1Q8IYQ7 743 aa12.15□□□□□ -0.46
TMEM116-215ENST00000552374 HELQQ8TDG4 1101 aa12.15□□□□□ -0.46
TMEM116-215ENST00000552374 ADAMTS19Q8TE59 1207 aa12.15□□□□□ -0.46
TMEM116-215ENST00000552374 POF1BQ8WVV4 589 aa12.15□□□□□ -0.46
TMEM116-215ENST00000552374 P2RX5Q93086 422 aa12.15□□□□□ -0.46
TMEM116-215ENST00000552374 NACC1Q96RE7 527 aa12.15□□□□□ -0.46
TMEM116-215ENST00000552374 POLR3CQ9BUI4 534 aaPredicted RBP12.15□□□□□ -0.46
TMEM116-215ENST00000552374 LMAN2LQ9H0V9 348 aa12.15□□□□□ -0.46
TMEM116-215ENST00000552374 UBE2ZQ9H832 354 aaPredicted RBP12.15□□□□□ -0.46
TMEM116-215ENST00000552374 XPNPEP1Q9NQW7 623 aa12.15□□□□□ -0.46
TMEM116-215ENST00000552374 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.15□□□□□ -0.46
TMEM116-215ENST00000552374 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.14□□□□□ -0.47
TMEM116-215ENST00000552374 SKIP12755 728 aa12.14□□□□□ -0.47
TMEM116-215ENST00000552374 RPA1P27694 616 aa12.14□□□□□ -0.47
TMEM116-215ENST00000552374 CCT6AP40227 531 aaKnown RBP12.14□□□□□ -0.47
TMEM116-215ENST00000552374 TFDP1Q14186 410 aa12.14□□□□□ -0.47
TMEM116-215ENST00000552374 CLLU1OSQ5K130 101 aa12.14□□□□□ -0.47
TMEM116-215ENST00000552374 COLGALT1Q8NBJ5 622 aa12.14□□□□□ -0.47
TMEM116-215ENST00000552374 LPPQ93052 612 aa12.14□□□□□ -0.47
TMEM116-215ENST00000552374 NECAB3Q96P71 396 aaPredicted RBP12.14□□□□□ -0.47
TMEM116-215ENST00000552374 UHRF1Q96T88 793 aaPredicted RBP12.14□□□□□ -0.47
TMEM116-215ENST00000552374 BACH2Q9BYV9 841 aa12.14□□□□□ -0.47
TMEM116-215ENST00000552374 CWH43Q9H720 699 aa12.14□□□□□ -0.47
TMEM116-215ENST00000552374 FAM105AQ9NUU6 356 aa12.14□□□□□ -0.47
TMEM116-215ENST00000552374 RNF19AQ9NV58 838 aa12.14□□□□□ -0.47
TMEM116-215ENST00000552374 LRWD1Q9UFC0 647 aa12.14□□□□□ -0.47
TMEM116-215ENST00000552374 TTC28Q96AY4 2481 aa12.14□□□□□ -0.47
TMEM116-215ENST00000552374 H3BQ06 376 aaPredicted RBP12.13□□□□□ -0.47
TMEM116-215ENST00000552374 INO80B-WBP1J3KQ70 363 aa12.13□□□□□ -0.47
TMEM116-215ENST00000552374 FGF18O76093 207 aa12.13□□□□□ -0.47
TMEM116-215ENST00000552374 ERLIN2O94905 339 aa12.13□□□□□ -0.47
TMEM116-215ENST00000552374 ATF7P17544 494 aaPredicted RBP12.13□□□□□ -0.47
TMEM116-215ENST00000552374 HOXA11P31270 313 aaPredicted RBP12.13□□□□□ -0.47
TMEM116-215ENST00000552374 ARL2P36404 184 aa12.13□□□□□ -0.47
TMEM116-215ENST00000552374 PBX3P40426 434 aa12.13□□□□□ -0.47
TMEM116-215ENST00000552374 PTENP60484 403 aa12.13□□□□□ -0.47
TMEM116-215ENST00000552374 NCBP1Q09161 790 aaKnown RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms