RNA–Protein interactions for RNA: ENST00000552003.1

SLC48A1-209, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 882 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-209ENST00000552003 SAMD3Q8N6K7 520 aa11.76□□□□□ -0.53
SLC48A1-209ENST00000552003 CMASQ8NFW8 434 aaPredicted RBP11.76□□□□□ -0.53
SLC48A1-209ENST00000552003 PI4K2BQ8TCG2 481 aa11.76□□□□□ -0.53
SLC48A1-209ENST00000552003 HELQQ8TDG4 1101 aa11.76□□□□□ -0.53
SLC48A1-209ENST00000552003 FGF14Q92915 247 aa11.76□□□□□ -0.53
SLC48A1-209ENST00000552003 NXPE3Q969Y0 559 aa11.76□□□□□ -0.53
SLC48A1-209ENST00000552003 TMEM169Q96HH4 297 aa11.76□□□□□ -0.53
SLC48A1-209ENST00000552003 OSMRQ99650 979 aa11.76□□□□□ -0.53
SLC48A1-209ENST00000552003 LTB4R2Q9NPC1 389 aa11.76□□□□□ -0.53
SLC48A1-209ENST00000552003 CCDC195A0A1B0GUA6 201 aa11.75□□□□□ -0.53
SLC48A1-209ENST00000552003 ZBTB5O15062 677 aa11.75□□□□□ -0.53
SLC48A1-209ENST00000552003 STAM2O75886 525 aa11.75□□□□□ -0.53
SLC48A1-209ENST00000552003 RPLP2P05387 115 aaKnown RBP11.75□□□□□ -0.53
SLC48A1-209ENST00000552003 ITGB5P18084 799 aa11.75□□□□□ -0.53
SLC48A1-209ENST00000552003 TARSP26639 723 aaKnown RBP11.75□□□□□ -0.53
SLC48A1-209ENST00000552003 MTAPQ13126 283 aa11.75□□□□□ -0.53
SLC48A1-209ENST00000552003 CCDC6Q16204 474 aa11.75□□□□□ -0.53
SLC48A1-209ENST00000552003 KIZQ2M2Z5 673 aa11.75□□□□□ -0.53
SLC48A1-209ENST00000552003 SLC44A4Q53GD3 710 aa11.75□□□□□ -0.53
SLC48A1-209ENST00000552003 SOWAHCQ53LP3 525 aaPredicted RBP11.75□□□□□ -0.53
SLC48A1-209ENST00000552003 PARM1Q6UWI2 310 aa11.75□□□□□ -0.53
SLC48A1-209ENST00000552003 OTUD7AQ8TE49 926 aaPredicted RBP11.75□□□□□ -0.53
SLC48A1-209ENST00000552003 IGSF21Q96ID5 467 aa11.75□□□□□ -0.53
SLC48A1-209ENST00000552003 OSBPL6Q9BZF3 934 aa11.75□□□□□ -0.53
SLC48A1-209ENST00000552003 PKD2L1Q9P0L9 805 aa11.75□□□□□ -0.53
SLC48A1-209ENST00000552003 DAXXQ9UER7 740 aaPredicted RBP11.75□□□□□ -0.53
SLC48A1-209ENST00000552003 GREB1Q4ZG55 1949 aa11.74□□□□□ -0.53
SLC48A1-209ENST00000552003 GPR182O15218 404 aa11.74□□□□□ -0.53
SLC48A1-209ENST00000552003 LRP3O75074 770 aa11.74□□□□□ -0.53
SLC48A1-209ENST00000552003 GPR32O75388 356 aa11.74□□□□□ -0.53
SLC48A1-209ENST00000552003 PAPLNO95428 1278 aa11.74□□□□□ -0.53
SLC48A1-209ENST00000552003 PARP1P09874 1014 aaKnown RBP11.74□□□□□ -0.53
SLC48A1-209ENST00000552003 KLRC1P26715 233 aa11.74□□□□□ -0.53
SLC48A1-209ENST00000552003 KLRC2P26717 231 aa11.74□□□□□ -0.53
SLC48A1-209ENST00000552003 POLGP54098 1239 aaPredicted RBP11.74□□□□□ -0.53
SLC48A1-209ENST00000552003 SRSF5Q13243 272 aaKnown RBP11.74□□□□□ -0.53
SLC48A1-209ENST00000552003 MLF2Q15773 248 aaPredicted RBP11.74□□□□□ -0.53
SLC48A1-209ENST00000552003 PCNX4Q63HM2 1172 aa11.74□□□□□ -0.53
SLC48A1-209ENST00000552003 PPFIBP1Q86W92 1011 aa11.74□□□□□ -0.53
SLC48A1-209ENST00000552003 ZNF687Q8N1G0 1237 aa11.74□□□□□ -0.53
SLC48A1-209ENST00000552003 PIGSQ96S52 555 aa11.74□□□□□ -0.53
SLC48A1-209ENST00000552003 MAN1C1Q9NR34 630 aa11.74□□□□□ -0.53
SLC48A1-209ENST00000552003 MTCL1Q9Y4B5 1905 aaKnown RBP11.74□□□□□ -0.53
SLC48A1-209ENST00000552003 TRIM6-TRIM34B2RNG4 842 aa11.73□□□□□ -0.53
SLC48A1-209ENST00000552003 ZBTB42B2RXF5 422 aa11.73□□□□□ -0.53
SLC48A1-209ENST00000552003 INPPL1O15357 1258 aa11.73□□□□□ -0.53
SLC48A1-209ENST00000552003 HRO43593 1189 aa11.73□□□□□ -0.53
SLC48A1-209ENST00000552003 CYTH3O43739 400 aa11.73□□□□□ -0.53
SLC48A1-209ENST00000552003 KCNK5O95279 499 aa11.73□□□□□ -0.53
SLC48A1-209ENST00000552003 SSBP05455 408 aaKnown RBP eCLIP11.73□□□□□ -0.53
SLC48A1-209ENST00000552003 GALTP07902 379 aa11.73□□□□□ -0.53
SLC48A1-209ENST00000552003 HOXC13P31276 330 aa11.73□□□□□ -0.53
SLC48A1-209ENST00000552003 ALDH7A1P49419 539 aaKnown RBP11.73□□□□□ -0.53
SLC48A1-209ENST00000552003 ADAMTS20P59510 1910 aa11.73□□□□□ -0.53
SLC48A1-209ENST00000552003 GIT2Q14161 759 aa11.73□□□□□ -0.53
SLC48A1-209ENST00000552003 HOMER1Q86YM7 354 aa11.73□□□□□ -0.53
SLC48A1-209ENST00000552003 ABI1Q8IZP0 508 aa11.73□□□□□ -0.53
SLC48A1-209ENST00000552003 ENAHQ8N8S7 591 aaPredicted RBP11.73□□□□□ -0.53
SLC48A1-209ENST00000552003 TMEM87AQ8NBN3 555 aa11.73□□□□□ -0.53
SLC48A1-209ENST00000552003 RNF169Q8NCN4 708 aa11.73□□□□□ -0.53
SLC48A1-209ENST00000552003 GATA6Q92908 595 aa11.73□□□□□ -0.53
SLC48A1-209ENST00000552003 SHDQ96IW2 340 aa11.73□□□□□ -0.53
SLC48A1-209ENST00000552003 RHOBTB2Q9BYZ6 727 aa11.73□□□□□ -0.53
SLC48A1-209ENST00000552003 NRDE2Q9H7Z3 1164 aa11.73□□□□□ -0.53
SLC48A1-209ENST00000552003 DNAJB4Q9UDY4 337 aa11.73□□□□□ -0.53
SLC48A1-209ENST00000552003 MAD2L2Q9UI95 211 aa11.73□□□□□ -0.53
SLC48A1-209ENST00000552003 MEIS3P2A8K0S8 358 aa11.72□□□□□ -0.53
SLC48A1-209ENST00000552003 KLRF2D3W0D1 207 aa11.72□□□□□ -0.53
SLC48A1-209ENST00000552003 GIPC1O14908 333 aa11.72□□□□□ -0.53
SLC48A1-209ENST00000552003 HOXA2O43364 376 aa11.72□□□□□ -0.53
SLC48A1-209ENST00000552003 ZC3H11AO75152 810 aaKnown RBP eCLIP11.72□□□□□ -0.53
SLC48A1-209ENST00000552003 SPATA31D3P0C874 917 aa11.72□□□□□ -0.53
SLC48A1-209ENST00000552003 SLC11A1P49279 550 aa11.72□□□□□ -0.53
SLC48A1-209ENST00000552003 CRYBB1P53674 252 aaPredicted RBP11.72□□□□□ -0.53
SLC48A1-209ENST00000552003 PRKCQQ04759 706 aa11.72□□□□□ -0.53
SLC48A1-209ENST00000552003 SF3A2Q15428 464 aaKnown RBP11.72□□□□□ -0.53
SLC48A1-209ENST00000552003 USP17L6PQ6QN14 398 aa11.72□□□□□ -0.53
SLC48A1-209ENST00000552003 PRR23BQ6ZRT6 265 aa11.72□□□□□ -0.53
SLC48A1-209ENST00000552003 MFSD6Q6ZSS7 791 aa11.72□□□□□ -0.53
SLC48A1-209ENST00000552003 SPATA31D4Q6ZUB0 917 aa11.72□□□□□ -0.53
SLC48A1-209ENST00000552003 GET4Q7L5D6 327 aaPredicted RBP11.72□□□□□ -0.53
SLC48A1-209ENST00000552003 CELF5Q8N6W0 485 aaKnown RBP11.72□□□□□ -0.53
SLC48A1-209ENST00000552003 DDX1Q92499 740 aaKnown RBP11.72□□□□□ -0.53
SLC48A1-209ENST00000552003 SMG7Q92540 1137 aaKnown RBP11.72□□□□□ -0.53
SLC48A1-209ENST00000552003 MYL10Q9BUA6 226 aa11.72□□□□□ -0.53
SLC48A1-209ENST00000552003 KAT14Q9H8E8 782 aa11.72□□□□□ -0.53
SLC48A1-209ENST00000552003 NOTCH4Q99466 2003 aa11.71□□□□□ -0.53
SLC48A1-209ENST00000552003 MEIS2O14770 477 aa11.71□□□□□ -0.53
SLC48A1-209ENST00000552003 VTNP04004 478 aa11.71□□□□□ -0.53
SLC48A1-209ENST00000552003 RPS9P46781 194 aaKnown RBP11.71□□□□□ -0.53
SLC48A1-209ENST00000552003 LIMK1P53667 647 aa11.71□□□□□ -0.53
SLC48A1-209ENST00000552003 ZBTB41Q5SVQ8 909 aa11.71□□□□□ -0.53
SLC48A1-209ENST00000552003 IL31Q6EBC2 164 aa11.71□□□□□ -0.53
SLC48A1-209ENST00000552003 FAM43BQ6ZT52 329 aaPredicted RBP11.71□□□□□ -0.53
SLC48A1-209ENST00000552003 TAS1R1Q7RTX1 841 aa11.71□□□□□ -0.53
SLC48A1-209ENST00000552003 ZNF589Q86UQ0 364 aaPredicted RBP11.71□□□□□ -0.53
SLC48A1-209ENST00000552003 GIMAP8Q8ND71 665 aaPredicted RBP11.71□□□□□ -0.53
SLC48A1-209ENST00000552003 STAMQ92783 540 aa11.71□□□□□ -0.53
SLC48A1-209ENST00000552003 GPRASP2Q96D09 838 aa11.71□□□□□ -0.53
SLC48A1-209ENST00000552003 FAM227BQ96M60 508 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms