RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 ZNF610Q8N9Z0 462 aa5.51□□□□□ -1.53
SNRPF-202ENST00000549580 PIP4K2CQ8TBX8 421 aa5.51□□□□□ -1.53
SNRPF-202ENST00000549580 JPH3Q8WXH2 748 aaPredicted RBP5.51□□□□□ -1.53
SNRPF-202ENST00000549580 TOE1Q96GM8 510 aaKnown RBP5.51□□□□□ -1.53
SNRPF-202ENST00000549580 SLC6A20Q9NP91 592 aa5.51□□□□□ -1.53
SNRPF-202ENST00000549580 C14orf119Q9NWQ9 140 aa5.51□□□□□ -1.53
SNRPF-202ENST00000549580 FTSJ1Q9UET6 329 aa5.51□□□□□ -1.53
SNRPF-202ENST00000549580 SRPK3Q9UPE1 567 aa5.51□□□□□ -1.53
SNRPF-202ENST00000549580 COA3Q9Y2R0 106 aaPredicted RBP5.51□□□□□ -1.53
SNRPF-202ENST00000549580 TRIM75PA6NK02 468 aa5.5□□□□□ -1.53
SNRPF-202ENST00000549580 CLASP2O75122 1294 aaKnown RBP5.5□□□□□ -1.53
SNRPF-202ENST00000549580 KRT37O76014 449 aa5.5□□□□□ -1.53
SNRPF-202ENST00000549580 COL6A1P12109 1028 aa5.5□□□□□ -1.53
SNRPF-202ENST00000549580 SLC9A1P19634 815 aa5.5□□□□□ -1.53
SNRPF-202ENST00000549580 EPHA5P54756 1037 aa5.5□□□□□ -1.53
SNRPF-202ENST00000549580 PRKD1Q15139 912 aaPredicted RBP5.5□□□□□ -1.53
SNRPF-202ENST00000549580 PCBP2Q15366 365 aaKnown RBP eCLIP5.5□□□□□ -1.53
SNRPF-202ENST00000549580 SEC23AQ15436 765 aa5.5□□□□□ -1.53
SNRPF-202ENST00000549580 ZNF174Q15697 407 aa5.5□□□□□ -1.53
SNRPF-202ENST00000549580 FIGNQ5HY92 759 aa5.5□□□□□ -1.53
SNRPF-202ENST00000549580 TMEM240Q5SV17 173 aa5.5□□□□□ -1.53
SNRPF-202ENST00000549580 CXorf57Q6NSI4 855 aaKnown RBP5.5□□□□□ -1.53
SNRPF-202ENST00000549580 CYP4F22Q6NT55 531 aa5.5□□□□□ -1.53
SNRPF-202ENST00000549580 CC2D1AQ6P1N0 951 aaPredicted RBP5.5□□□□□ -1.53
SNRPF-202ENST00000549580 NLGN4XQ8N0W4 816 aa5.5□□□□□ -1.53
SNRPF-202ENST00000549580 MAGEB6Q8N7X4 407 aa5.5□□□□□ -1.53
SNRPF-202ENST00000549580 FAXDC2Q96IV6 333 aa5.5□□□□□ -1.53
SNRPF-202ENST00000549580 LRRC37BQ96QE4 947 aa5.5□□□□□ -1.53
SNRPF-202ENST00000549580 ZDHHC5Q9C0B5 715 aa5.5□□□□□ -1.53
SNRPF-202ENST00000549580 PDGFDQ9GZP0 370 aaPredicted RBP5.5□□□□□ -1.53
SNRPF-202ENST00000549580 CSRNP2Q9H175 543 aa5.5□□□□□ -1.53
SNRPF-202ENST00000549580 ZMAT4Q9H898 229 aa5.5□□□□□ -1.53
SNRPF-202ENST00000549580 ACSS2Q9NR19 701 aa5.5□□□□□ -1.53
SNRPF-202ENST00000549580 TOPORSQ9NS56 1045 aaPredicted RBP5.5□□□□□ -1.53
SNRPF-202ENST00000549580 DTLQ9NZJ0 730 aa5.5□□□□□ -1.53
SNRPF-202ENST00000549580 DSEQ9UL01 958 aa5.5□□□□□ -1.53
SNRPF-202ENST00000549580 LUC7L2Q9Y383 392 aaKnown RBP5.5□□□□□ -1.53
SNRPF-202ENST00000549580 WASHC2AQ641Q2 1341 aa5.49□□□□□ -1.53
SNRPF-202ENST00000549580 A0A087X1B8 175 aa5.49□□□□□ -1.53
SNRPF-202ENST00000549580 TCRBV5S2A0A599 114 aa5.49□□□□□ -1.53
SNRPF-202ENST00000549580 KCNK3O14649 394 aa5.49□□□□□ -1.53
SNRPF-202ENST00000549580 PRPF3O43395 683 aaKnown RBP5.49□□□□□ -1.53
SNRPF-202ENST00000549580 CAND2O75155 1236 aa5.49□□□□□ -1.53
SNRPF-202ENST00000549580 TADA3O75528 432 aa5.49□□□□□ -1.53
SNRPF-202ENST00000549580 MT-CO1P00395 513 aa5.49□□□□□ -1.53
SNRPF-202ENST00000549580 CFBP00751 764 aa5.49□□□□□ -1.53
SNRPF-202ENST00000549580 CYP17A1P05093 508 aa5.49□□□□□ -1.53
SNRPF-202ENST00000549580 ATF3P18847 181 aa5.49□□□□□ -1.53
SNRPF-202ENST00000549580 RECQLP46063 649 aaPredicted RBP5.49□□□□□ -1.53
SNRPF-202ENST00000549580 INHBCP55103 352 aa5.49□□□□□ -1.53
SNRPF-202ENST00000549580 MLC1Q15049 377 aa5.49□□□□□ -1.53
SNRPF-202ENST00000549580 MAP9Q49MG5 647 aa5.49□□□□□ -1.53
SNRPF-202ENST00000549580 GPR155Q7Z3F1 870 aa5.49□□□□□ -1.53
SNRPF-202ENST00000549580 CPA6Q8N4T0 437 aa5.49□□□□□ -1.53
SNRPF-202ENST00000549580 LMBR1Q8WVP7 490 aa5.49□□□□□ -1.53
SNRPF-202ENST00000549580 BARX1Q9HBU1 254 aaPredicted RBP5.49□□□□□ -1.53
SNRPF-202ENST00000549580 NGRNQ9NPE2 291 aaKnown RBP5.49□□□□□ -1.53
SNRPF-202ENST00000549580 TOMM22Q9NS69 142 aa5.49□□□□□ -1.53
SNRPF-202ENST00000549580 IP6K2Q9UHH9 426 aa5.49□□□□□ -1.53
SNRPF-202ENST00000549580 ADAM29Q9UKF5 820 aa5.49□□□□□ -1.53
SNRPF-202ENST00000549580 ARID4BQ4LE39 1312 aaPredicted RBP5.48□□□□□ -1.53
SNRPF-202ENST00000549580 KRIT1O00522 736 aa5.48□□□□□ -1.53
SNRPF-202ENST00000549580 PCDHGA12O60330 932 aa5.48□□□□□ -1.53
SNRPF-202ENST00000549580 HIP1RO75146 1068 aa5.48□□□□□ -1.53
SNRPF-202ENST00000549580 SNUPNO95149 360 aaKnown RBP5.48□□□□□ -1.53
SNRPF-202ENST00000549580 LMO1P25800 156 aa5.48□□□□□ -1.53
SNRPF-202ENST00000549580 GPR3P46089 330 aa5.48□□□□□ -1.53
SNRPF-202ENST00000549580 KIF11P52732 1056 aa5.48□□□□□ -1.53
SNRPF-202ENST00000549580 KRTAP10-9P60411 292 aa5.48□□□□□ -1.53
SNRPF-202ENST00000549580 ESRP1Q6NXG1 681 aaKnown RBP5.48□□□□□ -1.53
SNRPF-202ENST00000549580 FRMD7Q6ZUT3 714 aa5.48□□□□□ -1.53
SNRPF-202ENST00000549580 ZZZ3Q8IYH5 903 aa5.48□□□□□ -1.53
SNRPF-202ENST00000549580 ORAI2Q96SN7 254 aa5.48□□□□□ -1.53
SNRPF-202ENST00000549580 CD244Q9BZW8 370 aa5.48□□□□□ -1.53
SNRPF-202ENST00000549580 PCIF1Q9H4Z3 704 aa5.48□□□□□ -1.53
SNRPF-202ENST00000549580 PNMA8BQ9ULN7 279 aaPredicted RBP5.48□□□□□ -1.53
SNRPF-202ENST00000549580 NOB1Q9ULX3 412 aaKnown RBP5.48□□□□□ -1.53
SNRPF-202ENST00000549580 ZNF652Q9Y2D9 606 aa5.48□□□□□ -1.53
SNRPF-202ENST00000549580 ANKRD6Q9Y2G4 727 aa5.48□□□□□ -1.53
SNRPF-202ENST00000549580 NOC2LQ9Y3T9 749 aaKnown RBP5.48□□□□□ -1.53
SNRPF-202ENST00000549580 PCDHGA9Q9Y5G4 932 aaKnown RBP5.48□□□□□ -1.53
SNRPF-202ENST00000549580 PCDHGA8Q9Y5G5 932 aa5.48□□□□□ -1.53
SNRPF-202ENST00000549580 PCDHGA7Q9Y5G6 932 aa5.48□□□□□ -1.53
SNRPF-202ENST00000549580 PCDHGA6Q9Y5G7 932 aa5.48□□□□□ -1.53
SNRPF-202ENST00000549580 PCDHGA3Q9Y5H0 932 aa5.48□□□□□ -1.53
SNRPF-202ENST00000549580 PCDHGA2Q9Y5H1 932 aa5.48□□□□□ -1.53
SNRPF-202ENST00000549580 ATP23Q9Y6H3 246 aa5.48□□□□□ -1.53
SNRPF-202ENST00000549580 GOLGA6CA6NDK9 693 aa5.47□□□□□ -1.53
SNRPF-202ENST00000549580 GOLGA6BA6NDN3 693 aa5.47□□□□□ -1.53
SNRPF-202ENST00000549580 SCDO00767 359 aa5.47□□□□□ -1.53
SNRPF-202ENST00000549580 KLHL18O94889 574 aa5.47□□□□□ -1.53
SNRPF-202ENST00000549580 GOLGA6DP0CG33 693 aa5.47□□□□□ -1.53
SNRPF-202ENST00000549580 U2AF1L5P0DN76 240 aaPredicted RBP5.47□□□□□ -1.53
SNRPF-202ENST00000549580 CCND1P24385 295 aa5.47□□□□□ -1.53
SNRPF-202ENST00000549580 PTX3P26022 381 aaPredicted RBP5.47□□□□□ -1.53
SNRPF-202ENST00000549580 MCM7P33993 719 aa5.47□□□□□ -1.53
SNRPF-202ENST00000549580 U2AF1Q01081 240 aaKnown RBP eCLIP5.47□□□□□ -1.53
SNRPF-202ENST00000549580 MOGSQ13724 837 aa5.47□□□□□ -1.53
SNRPF-202ENST00000549580 PDCD1Q15116 288 aa5.47□□□□□ -1.53
SNRPF-202ENST00000549580 EPHA7Q15375 998 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms