RNA–Protein interactions for RNA: ENST00000541819.6

GABRB3-204, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 5,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-204ENST00000541819 MTMR1Q13613 665 aa11.44□□□□□ -0.58
GABRB3-204ENST00000541819 TJAP1Q5JTD0 557 aa11.44□□□□□ -0.58
GABRB3-204ENST00000541819 DDX53Q86TM3 631 aaKnown RBP11.44□□□□□ -0.58
GABRB3-204ENST00000541819 FOXP4Q8IVH2 680 aaPredicted RBP11.44□□□□□ -0.58
GABRB3-204ENST00000541819 OLFML3Q9NRN5 406 aa11.44□□□□□ -0.58
GABRB3-204ENST00000541819 HOXC10Q9NYD6 342 aa11.44□□□□□ -0.58
GABRB3-204ENST00000541819 GDAQ9Y2T3 454 aa11.44□□□□□ -0.58
GABRB3-204ENST00000541819 FAM135BQ49AJ0 1406 aa11.43□□□□□ -0.58
GABRB3-204ENST00000541819 ZMYM4Q5VZL5 1548 aa11.43□□□□□ -0.58
GABRB3-204ENST00000541819 RNF103-CHMP3A0A140T963 221 aa11.43□□□□□ -0.58
GABRB3-204ENST00000541819 ASAP2O43150 1006 aa11.43□□□□□ -0.58
GABRB3-204ENST00000541819 SDC4P31431 198 aa11.43□□□□□ -0.58
GABRB3-204ENST00000541819 NUGGCQ68CJ6 796 aa11.43□□□□□ -0.58
GABRB3-204ENST00000541819 USP17L2Q6R6M4 530 aa11.43□□□□□ -0.58
GABRB3-204ENST00000541819 CDKL3Q8IVW4 592 aaPredicted RBP11.43□□□□□ -0.58
GABRB3-204ENST00000541819 EML4Q9HC35 981 aaKnown RBP11.43□□□□□ -0.58
GABRB3-204ENST00000541819 ZFP69BQ9UJL9 534 aa11.43□□□□□ -0.58
GABRB3-204ENST00000541819 DOLKQ9UPQ8 538 aa11.43□□□□□ -0.58
GABRB3-204ENST00000541819 UBXN8O00124 270 aa11.43□□□□□ -0.58
GABRB3-204ENST00000541819 ATP5HO75947 161 aa11.43□□□□□ -0.58
GABRB3-204ENST00000541819 KITP10721 976 aa11.43□□□□□ -0.58
GABRB3-204ENST00000541819 AP1B1Q10567 949 aa11.43□□□□□ -0.58
GABRB3-204ENST00000541819 PKN3Q6P5Z2 889 aa11.43□□□□□ -0.58
GABRB3-204ENST00000541819 RUBCNLQ9H714 662 aa11.43□□□□□ -0.58
GABRB3-204ENST00000541819 PSMC1P62191 440 aaKnown RBP11.43□□□□□ -0.58
GABRB3-204ENST00000541819 TBC1D9BQ66K14 1250 aa11.43□□□□□ -0.58
GABRB3-204ENST00000541819 HEATR6Q6AI08 1181 aaKnown RBP11.43□□□□□ -0.58
GABRB3-204ENST00000541819 TMEM179Q6ZVK1 233 aa11.43□□□□□ -0.58
GABRB3-204ENST00000541819 PLEKHM3Q6ZWE6 761 aa11.43□□□□□ -0.58
GABRB3-204ENST00000541819 MFN1Q8IWA4 741 aa11.43□□□□□ -0.58
GABRB3-204ENST00000541819 DDIASQ8IXT1 998 aa11.43□□□□□ -0.58
GABRB3-204ENST00000541819 BTN2A2Q8WVV5 523 aa11.43□□□□□ -0.58
GABRB3-204ENST00000541819 NDST4Q9H3R1 872 aa11.43□□□□□ -0.58
GABRB3-204ENST00000541819 RRAGDQ9NQL2 400 aaPredicted RBP11.43□□□□□ -0.58
GABRB3-204ENST00000541819 SPTLC3Q9NUV7 552 aa11.43□□□□□ -0.58
GABRB3-204ENST00000541819 GIMAP4Q9NUV9 329 aa11.43□□□□□ -0.58
GABRB3-204ENST00000541819 CNOT8Q9UFF9 292 aaKnown RBP11.43□□□□□ -0.58
GABRB3-204ENST00000541819 CCDC195A0A1B0GUA6 201 aa11.43□□□□□ -0.58
GABRB3-204ENST00000541819 FGGP02679 453 aa11.43□□□□□ -0.58
GABRB3-204ENST00000541819 GSNP06396 782 aa11.43□□□□□ -0.58
GABRB3-204ENST00000541819 ADD2P35612 726 aa11.43□□□□□ -0.58
GABRB3-204ENST00000541819 CARSP49589 748 aaKnown RBP11.43□□□□□ -0.58
GABRB3-204ENST00000541819 PRELPP51888 382 aa11.43□□□□□ -0.58
GABRB3-204ENST00000541819 ZNF235Q14590 738 aa11.43□□□□□ -0.58
GABRB3-204ENST00000541819 MAPRE2Q15555 327 aa11.43□□□□□ -0.58
GABRB3-204ENST00000541819 NBPF20Q3BBV1 942 aa11.43□□□□□ -0.58
GABRB3-204ENST00000541819 ZNF394Q53GI3 561 aa11.43□□□□□ -0.58
GABRB3-204ENST00000541819 C1orf146Q5VVC0 180 aa11.43□□□□□ -0.58
GABRB3-204ENST00000541819 NBPF10Q6P3W6 841 aaKnown RBP11.43□□□□□ -0.58
GABRB3-204ENST00000541819 TTC39CQ8N584 583 aa11.43□□□□□ -0.58
GABRB3-204ENST00000541819 ADA2Q9NZK5 511 aa11.43□□□□□ -0.58
GABRB3-204ENST00000541819 FEM1BQ9UK73 627 aa11.43□□□□□ -0.58
GABRB3-204ENST00000541819 UGGT2Q9NYU1 1516 aa11.42□□□□□ -0.58
GABRB3-204ENST00000541819 HDLBPQ00341 1268 aaKnown RBP11.42□□□□□ -0.58
GABRB3-204ENST00000541819 MRPL28Q13084 256 aaKnown RBP11.42□□□□□ -0.58
GABRB3-204ENST00000541819 TTLL4Q14679 1199 aa11.42□□□□□ -0.58
GABRB3-204ENST00000541819 ZC3H18Q86VM9 953 aaKnown RBP11.42□□□□□ -0.58
GABRB3-204ENST00000541819 PPHLN1Q8NEY8 458 aaKnown RBP11.42□□□□□ -0.58
GABRB3-204ENST00000541819 ZNF302Q9NR11 478 aa11.42□□□□□ -0.58
GABRB3-204ENST00000541819 MIF4GDA9UHW6 222 aaKnown RBP11.42□□□□□ -0.58
GABRB3-204ENST00000541819 C5orf58C9J3I9 102 aa11.42□□□□□ -0.58
GABRB3-204ENST00000541819 CCDC188H7C350 402 aa11.42□□□□□ -0.58
GABRB3-204ENST00000541819 MAFGO15525 162 aa11.42□□□□□ -0.58
GABRB3-204ENST00000541819 TCF3P15923 654 aa11.42□□□□□ -0.58
GABRB3-204ENST00000541819 TBXAS1P24557 533 aaPredicted RBP11.42□□□□□ -0.58
GABRB3-204ENST00000541819 MAP4P27816 1152 aaKnown RBP11.42□□□□□ -0.58
GABRB3-204ENST00000541819 CATSPER3Q86XQ3 398 aa11.42□□□□□ -0.58
GABRB3-204ENST00000541819 BICRAQ9NZM4 1560 aa11.42□□□□□ -0.58
GABRB3-204ENST00000541819 SOWAHDA6NJG2 315 aa11.42□□□□□ -0.58
GABRB3-204ENST00000541819 ASMTLO95671 621 aa11.42□□□□□ -0.58
GABRB3-204ENST00000541819 SNAP25P60880 206 aa11.42□□□□□ -0.58
GABRB3-204ENST00000541819 TDRD7Q8NHU6 1098 aaKnown RBP11.42□□□□□ -0.58
GABRB3-204ENST00000541819 RGL1Q9NZL6 768 aa11.42□□□□□ -0.58
GABRB3-204ENST00000541819 DNAJC12Q9UKB3 198 aa11.42□□□□□ -0.58
GABRB3-204ENST00000541819 RASA4BC9J798 803 aa11.42□□□□□ -0.58
GABRB3-204ENST00000541819 RASA4O43374 803 aa11.42□□□□□ -0.58
GABRB3-204ENST00000541819 MOCS2O96007 188 aaPredicted RBP11.42□□□□□ -0.58
GABRB3-204ENST00000541819 ASNSP08243 561 aa11.42□□□□□ -0.58
GABRB3-204ENST00000541819 ST8SIA6P61647 398 aa11.42□□□□□ -0.58
GABRB3-204ENST00000541819 CYP27A1Q02318 531 aa11.42□□□□□ -0.58
GABRB3-204ENST00000541819 NME3Q13232 169 aa11.42□□□□□ -0.58
GABRB3-204ENST00000541819 EPM2AIP1Q7L775 607 aaPredicted RBP11.42□□□□□ -0.58
GABRB3-204ENST00000541819 GRAMD1CQ8IYS0 662 aa11.42□□□□□ -0.58
GABRB3-204ENST00000541819 SPON2Q9BUD6 331 aa11.42□□□□□ -0.58
GABRB3-204ENST00000541819 SH3GLB2Q9NR46 395 aa11.42□□□□□ -0.58
GABRB3-204ENST00000541819 ATF5Q9Y2D1 282 aaPredicted RBP11.42□□□□□ -0.58
GABRB3-204ENST00000541819 A0A087WUV0 522 aaPredicted RBP11.42□□□□□ -0.58
GABRB3-204ENST00000541819 ROR1Q01973 937 aa11.42□□□□□ -0.58
GABRB3-204ENST00000541819 BTBD8Q5XKL5 378 aa11.42□□□□□ -0.58
GABRB3-204ENST00000541819 LCORLQ8N3X6 602 aa11.42□□□□□ -0.58
GABRB3-204ENST00000541819 COA1Q9GZY4 146 aa11.42□□□□□ -0.58
GABRB3-204ENST00000541819 AIPL1Q9NZN9 384 aa11.42□□□□□ -0.58
GABRB3-204ENST00000541819 SH2B2O14492 632 aaPredicted RBP11.41□□□□□ -0.58
GABRB3-204ENST00000541819 HMGB3O15347 200 aaKnown RBP11.41□□□□□ -0.58
GABRB3-204ENST00000541819 ABCC4O15439 1325 aa11.41□□□□□ -0.58
GABRB3-204ENST00000541819 PLXNC1O60486 1568 aa11.41□□□□□ -0.58
GABRB3-204ENST00000541819 ALDH1A1P00352 501 aa11.41□□□□□ -0.58
GABRB3-204ENST00000541819 ALKBH5Q6P6C2 394 aaKnown RBP11.41□□□□□ -0.58
GABRB3-204ENST00000541819 PASD1Q8IV76 773 aa11.41□□□□□ -0.58
GABRB3-204ENST00000541819 RMDN1Q96DB5 314 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms