RNA–Protein interactions for RNA: ENST00000540555.1

TSG101-205, Transcript of tumor susceptibility 101, humanhuman

TSL 2

Gene TSG101, Length 571 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSG101-205ENST00000540555 PUM1Q14671 1186 aaKnown RBP eCLIP4.82□□□□□ -1.64
TSG101-205ENST00000540555 ZYXQ15942 572 aaKnown RBP4.82□□□□□ -1.64
TSG101-205ENST00000540555 NKPD1Q17RQ9 610 aa4.82□□□□□ -1.64
TSG101-205ENST00000540555 FAM47AQ5JRC9 791 aa4.82□□□□□ -1.64
TSG101-205ENST00000540555 SFRP5Q5T4F7 317 aa4.82□□□□□ -1.64
TSG101-205ENST00000540555 LCE1DQ5T752 114 aa4.82□□□□□ -1.64
TSG101-205ENST00000540555 CCSAPQ6IQ19 270 aaPredicted RBP4.82□□□□□ -1.64
TSG101-205ENST00000540555 CDC42EP5Q6NZY7 148 aa4.82□□□□□ -1.64
TSG101-205ENST00000540555 UNC5AQ6ZN44 842 aa4.82□□□□□ -1.64
TSG101-205ENST00000540555 SUGP1Q8IWZ8 645 aaKnown RBP4.82□□□□□ -1.64
TSG101-205ENST00000540555 PLD6Q8N2A8 252 aaKnown RBP4.82□□□□□ -1.64
TSG101-205ENST00000540555 NPLOC4Q8TAT6 608 aa4.82□□□□□ -1.64
TSG101-205ENST00000540555 CRBNQ96SW2 442 aa4.82□□□□□ -1.64
TSG101-205ENST00000540555 IDI2Q9BXS1 227 aa4.82□□□□□ -1.64
TSG101-205ENST00000540555 TNKS2Q9H2K2 1166 aa4.82□□□□□ -1.64
TSG101-205ENST00000540555 GTF2IRD1Q9UHL9 959 aa4.82□□□□□ -1.64
TSG101-205ENST00000540555 TPX2Q9ULW0 747 aaKnown RBP4.82□□□□□ -1.64
TSG101-205ENST00000540555 MRVI1Q9Y6F6 885 aa4.82□□□□□ -1.64
TSG101-205ENST00000540555 COL4A6Q14031 1691 aa4.82□□□□□ -1.64
TSG101-205ENST00000540555 MAP1BP46821 2468 aaKnown RBP4.82□□□□□ -1.64
TSG101-205ENST00000540555 ZNF536O15090 1300 aa4.81□□□□□ -1.64
TSG101-205ENST00000540555 ELP1O95163 1332 aa4.81□□□□□ -1.64
TSG101-205ENST00000540555 MROH7Q68CQ1 1323 aa4.81□□□□□ -1.64
TSG101-205ENST00000540555 CHL1O00533 1208 aa4.81□□□□□ -1.64
TSG101-205ENST00000540555 COBLO75128 1261 aa4.81□□□□□ -1.64
TSG101-205ENST00000540555 ADAMTS4O75173 837 aa4.81□□□□□ -1.64
TSG101-205ENST00000540555 LRRN2O75325 713 aa4.81□□□□□ -1.64
TSG101-205ENST00000540555 ENTPD3O75355 529 aa4.81□□□□□ -1.64
TSG101-205ENST00000540555 CNMDO75829 334 aa4.81□□□□□ -1.64
TSG101-205ENST00000540555 CD4P01730 458 aa4.81□□□□□ -1.64
TSG101-205ENST00000540555 CA3P07451 260 aa4.81□□□□□ -1.64
TSG101-205ENST00000540555 ATP2A2P16615 1042 aaKnown RBP4.81□□□□□ -1.64
TSG101-205ENST00000540555 KCNA5P22460 613 aa4.81□□□□□ -1.64
TSG101-205ENST00000540555 HMGCS2P54868 508 aa4.81□□□□□ -1.64
TSG101-205ENST00000540555 IRX3P78415 501 aaPredicted RBP4.81□□□□□ -1.64
TSG101-205ENST00000540555 CNGB1Q14028 1251 aaPredicted RBP4.81□□□□□ -1.64
TSG101-205ENST00000540555 UBE4AQ14139 1066 aa4.81□□□□□ -1.64
TSG101-205ENST00000540555 KRT24Q2M2I5 525 aa4.81□□□□□ -1.64
TSG101-205ENST00000540555 TMEM67Q5HYA8 995 aa4.81□□□□□ -1.64
TSG101-205ENST00000540555 ZNF746Q6NUN9 644 aaPredicted RBP4.81□□□□□ -1.64
TSG101-205ENST00000540555 LBX2Q6XYB7 198 aa4.81□□□□□ -1.64
TSG101-205ENST00000540555 RNF180Q86T96 592 aa4.81□□□□□ -1.64
TSG101-205ENST00000540555 ZFPM1Q8IX07 1006 aa4.81□□□□□ -1.64
TSG101-205ENST00000540555 SPACA3Q8IXA5 215 aa4.81□□□□□ -1.64
TSG101-205ENST00000540555 ADSSL1Q8N142 457 aa4.81□□□□□ -1.64
TSG101-205ENST00000540555 C19orf47Q8N9M1 422 aaKnown RBP4.81□□□□□ -1.64
TSG101-205ENST00000540555 OR6P1Q8NGX9 317 aa4.81□□□□□ -1.64
TSG101-205ENST00000540555 PHOSPHO2Q8TCD6 241 aa4.81□□□□□ -1.64
TSG101-205ENST00000540555 RNF141Q8WVD5 230 aa4.81□□□□□ -1.64
TSG101-205ENST00000540555 CPLX3Q8WVH0 158 aa4.81□□□□□ -1.64
TSG101-205ENST00000540555 ANAPC16Q96DE5 110 aa4.81□□□□□ -1.64
TSG101-205ENST00000540555 KREMEN1Q96MU8 473 aa4.81□□□□□ -1.64
TSG101-205ENST00000540555 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.81□□□□□ -1.64
TSG101-205ENST00000540555 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.81□□□□□ -1.64
TSG101-205ENST00000540555 RABGAP1Q9Y3P9 1069 aa4.81□□□□□ -1.64
TSG101-205ENST00000540555 LRRFIP2Q9Y608 721 aaKnown RBP4.81□□□□□ -1.64
TSG101-205ENST00000540555 SLC4A7Q9Y6M7 1214 aa4.81□□□□□ -1.64
TSG101-205ENST00000540555 CAPN6Q9Y6Q1 641 aa4.81□□□□□ -1.64
TSG101-205ENST00000540555 MYO9BQ13459 2157 aa4.81□□□□□ -1.64
TSG101-205ENST00000540555 FRMPD3Q5JV73 1810 aa4.81□□□□□ -1.64
TSG101-205ENST00000540555 EP300Q09472 2414 aaPredicted RBP4.81□□□□□ -1.64
TSG101-205ENST00000540555 CEP250Q9BV73 2442 aa4.81□□□□□ -1.64
TSG101-205ENST00000540555 PLXNA3P51805 1871 aa4.8□□□□□ -1.64
TSG101-205ENST00000540555 A0A1W2PQH9 124 aa4.8□□□□□ -1.64
TSG101-205ENST00000540555 KIAA1324LA8MWY0 1029 aaPredicted RBP4.8□□□□□ -1.64
TSG101-205ENST00000540555 CBX7O95931 251 aa4.8□□□□□ -1.64
TSG101-205ENST00000540555 SSBP05455 408 aaKnown RBP eCLIP4.8□□□□□ -1.64
TSG101-205ENST00000540555 CEACAM5P06731 702 aa4.8□□□□□ -1.64
TSG101-205ENST00000540555 PFKMP08237 780 aa4.8□□□□□ -1.64
TSG101-205ENST00000540555 SPINK2P20155 84 aa4.8□□□□□ -1.64
TSG101-205ENST00000540555 CYP7A1P22680 504 aa4.8□□□□□ -1.64
TSG101-205ENST00000540555 AVPR2P30518 371 aa4.8□□□□□ -1.64
TSG101-205ENST00000540555 GRIK1P39086 918 aa4.8□□□□□ -1.64
TSG101-205ENST00000540555 KIR3DL1P43629 444 aa4.8□□□□□ -1.64
TSG101-205ENST00000540555 ACLYP53396 1101 aa4.8□□□□□ -1.64
TSG101-205ENST00000540555 VCPP55072 806 aaKnown RBP4.8□□□□□ -1.64
TSG101-205ENST00000540555 TNK2Q07912 1038 aa4.8□□□□□ -1.64
TSG101-205ENST00000540555 TCP10Q12799 353 aa4.8□□□□□ -1.64
TSG101-205ENST00000540555 MCTP2Q6DN12 878 aa4.8□□□□□ -1.64
TSG101-205ENST00000540555 TTC6Q86TZ1 520 aa4.8□□□□□ -1.64
TSG101-205ENST00000540555 DTX1Q86Y01 620 aa4.8□□□□□ -1.64
TSG101-205ENST00000540555 FAM126BQ8IXS8 530 aa4.8□□□□□ -1.64
TSG101-205ENST00000540555 KLHDC9Q8NEP7 349 aa4.8□□□□□ -1.64
TSG101-205ENST00000540555 NETO1Q8TDF5 533 aa4.8□□□□□ -1.64
TSG101-205ENST00000540555 NUP133Q8WUM0 1156 aa4.8□□□□□ -1.64
TSG101-205ENST00000540555 ARNTL2Q8WYA1 636 aa4.8□□□□□ -1.64
TSG101-205ENST00000540555 NKD2Q969F2 451 aaPredicted RBP4.8□□□□□ -1.64
TSG101-205ENST00000540555 ASIC4Q96FT7 647 aa4.8□□□□□ -1.64
TSG101-205ENST00000540555 COX4I2Q96KJ9 171 aa4.8□□□□□ -1.64
TSG101-205ENST00000540555 SLC6A18Q96N87 628 aa4.8□□□□□ -1.64
TSG101-205ENST00000540555 OSBPL5Q9H0X9 879 aaPredicted RBP4.8□□□□□ -1.64
TSG101-205ENST00000540555 PNNQ9H307 717 aaKnown RBP4.8□□□□□ -1.64
TSG101-205ENST00000540555 XPNPEP3Q9NQH7 507 aa4.8□□□□□ -1.64
TSG101-205ENST00000540555 STARD7Q9NQZ5 370 aa4.8□□□□□ -1.64
TSG101-205ENST00000540555 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.8□□□□□ -1.64
TSG101-205ENST00000540555 MUTYHQ9UIF7 546 aa4.8□□□□□ -1.64
TSG101-205ENST00000540555 FAM50BQ9Y247 325 aa4.8□□□□□ -1.64
TSG101-205ENST00000540555 ST14Q9Y5Y6 855 aa4.8□□□□□ -1.64
TSG101-205ENST00000540555 LOC285556D6RIA3 1793 aa4.8□□□□□ -1.64
TSG101-205ENST00000540555 GCN1Q92616 2671 aaKnown RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms