RNA–Protein interactions for RNA: ENST00000540555.1

TSG101-205, Transcript of tumor susceptibility 101, humanhuman

TSL 2

Gene TSG101, Length 571 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSG101-205ENST00000540555 AEBP2Q6ZN18 517 aaPredicted RBP16.66■□□□□ 0.26
TSG101-205ENST00000540555 CHIC1Q5VXU3 224 aa15.66■□□□□ 0.1
TSG101-205ENST00000540555 SENP3Q9H4L4 574 aaPredicted RBP14.33□□□□□ -0.12
TSG101-205ENST00000540555 PHF23Q9BUL5 403 aaPredicted RBP14.07□□□□□ -0.16
TSG101-205ENST00000540555 FOXD1Q16676 465 aa13.35□□□□□ -0.27
TSG101-205ENST00000540555 POTEDQ86YR6 584 aa13.09□□□□□ -0.31
TSG101-205ENST00000540555 PLPPR3Q6T4P5 718 aa12.67□□□□□ -0.38
TSG101-205ENST00000540555 MSH5O43196 834 aa12.65□□□□□ -0.38
TSG101-205ENST00000540555 PIAS4Q8N2W9 510 aaPredicted RBP12.36□□□□□ -0.43
TSG101-205ENST00000540555 PPP6R1Q9UPN7 881 aa12.26□□□□□ -0.45
TSG101-205ENST00000540555 ADRA2BP18089 450 aa12.17□□□□□ -0.46
TSG101-205ENST00000540555 DMRT2Q9Y5R5 561 aa11.33□□□□□ -0.6
TSG101-205ENST00000540555 SCAF1Q9H7N4 1312 aaKnown RBP11.28□□□□□ -0.6
TSG101-205ENST00000540555 MAPK8IP2Q13387 824 aaPredicted RBP11.24□□□□□ -0.61
TSG101-205ENST00000540555 PPP4R3CPQ6ZMV5 832 aa11.19□□□□□ -0.62
TSG101-205ENST00000540555 CACNB1Q02641 598 aaPredicted RBP11.13□□□□□ -0.63
TSG101-205ENST00000540555 KCNA4P22459 653 aa11.05□□□□□ -0.64
TSG101-205ENST00000540555 NCBP3Q53F19 620 aaKnown RBP10.88□□□□□ -0.67
TSG101-205ENST00000540555 HOXD11P31277 338 aaPredicted RBP10.85□□□□□ -0.67
TSG101-205ENST00000540555 CNKSR2Q8WXI2 1034 aa10.85□□□□□ -0.67
TSG101-205ENST00000540555 DCAF8L1A6NGE4 600 aa10.81□□□□□ -0.68
TSG101-205ENST00000540555 NPM3O75607 178 aaKnown RBP10.78□□□□□ -0.68
TSG101-205ENST00000540555 RNF39Q9H2S5 420 aa10.76□□□□□ -0.69
TSG101-205ENST00000540555 RNF216Q9NWF9 866 aaPredicted RBP10.69□□□□□ -0.7
TSG101-205ENST00000540555 DNAJC5BQ9UF47 199 aa10.65□□□□□ -0.7
TSG101-205ENST00000540555 C1QBPQ07021 282 aaKnown RBP10.61□□□□□ -0.71
TSG101-205ENST00000540555 SLC4A1APQ9BWU0 796 aaKnown RBP10.5□□□□□ -0.73
TSG101-205ENST00000540555 EHMT2Q96KQ7 1210 aa10.3□□□□□ -0.76
TSG101-205ENST00000540555 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.24□□□□□ -0.77
TSG101-205ENST00000540555 CSRNP3Q8WYN3 585 aa10.21□□□□□ -0.77
TSG101-205ENST00000540555 NISCHQ9Y2I1 1504 aa10.21□□□□□ -0.78
TSG101-205ENST00000540555 ZBTB22O15209 634 aa10.2□□□□□ -0.78
TSG101-205ENST00000540555 SLC4A2P04920 1241 aa10.19□□□□□ -0.78
TSG101-205ENST00000540555 POTEHQ6S545 545 aa10.17□□□□□ -0.78
TSG101-205ENST00000540555 FOXD4L1Q9NU39 408 aa10.12□□□□□ -0.79
TSG101-205ENST00000540555 U3KPZ7 1027 aaPredicted RBP10□□□□□ -0.81
TSG101-205ENST00000540555 DSG3P32926 999 aa9.95□□□□□ -0.82
TSG101-205ENST00000540555 MYCNP04198 464 aaPredicted RBP9.91□□□□□ -0.82
TSG101-205ENST00000540555 SPINK5Q9NQ38 1064 aaPredicted RBP9.89□□□□□ -0.83
TSG101-205ENST00000540555 CAPN15O75808 1086 aa9.88□□□□□ -0.83
TSG101-205ENST00000540555 ABCC9O60706 1549 aa9.87□□□□□ -0.83
TSG101-205ENST00000540555 APLP2Q06481 763 aa9.8□□□□□ -0.84
TSG101-205ENST00000540555 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.76□□□□□ -0.85
TSG101-205ENST00000540555 HNRNPUL2Q1KMD3 747 aaKnown RBP9.76□□□□□ -0.85
TSG101-205ENST00000540555 ATXN8OSP0DMR3 200 aa9.75□□□□□ -0.85
TSG101-205ENST00000540555 SAMD1Q6SPF0 538 aaPredicted RBP9.74□□□□□ -0.85
TSG101-205ENST00000540555 ZNF219Q9P2Y4 722 aaPredicted RBP9.73□□□□□ -0.85
TSG101-205ENST00000540555 ATF5Q9Y2D1 282 aaPredicted RBP9.71□□□□□ -0.86
TSG101-205ENST00000540555 TRHP20396 242 aaPredicted RBP9.65□□□□□ -0.86
TSG101-205ENST00000540555 ABCB7O75027 752 aa9.62□□□□□ -0.87
TSG101-205ENST00000540555 RBM42Q9BTD8 480 aaKnown RBP9.55□□□□□ -0.88
TSG101-205ENST00000540555 DNAJC5Q9H3Z4 198 aa9.47□□□□□ -0.89
TSG101-205ENST00000540555 CHRDL2Q6WN34 429 aa9.46□□□□□ -0.9
TSG101-205ENST00000540555 POLA2Q14181 598 aa9.4□□□□□ -0.9
TSG101-205ENST00000540555 CCDC180Q9P1Z9 1646 aa9.34□□□□□ -0.91
TSG101-205ENST00000540555 SP7Q8TDD2 431 aaPredicted RBP9.33□□□□□ -0.92
TSG101-205ENST00000540555 MKRN4PQ13434 485 aaPredicted RBP9.29□□□□□ -0.92
TSG101-205ENST00000540555 AKT1S1Q96B36 256 aa9.28□□□□□ -0.92
TSG101-205ENST00000540555 ZBTB12Q9Y330 459 aaPredicted RBP9.28□□□□□ -0.92
TSG101-205ENST00000540555 FBLN2P98095 1184 aa9.21□□□□□ -0.94
TSG101-205ENST00000540555 RB1CC1Q8TDY2 1594 aa9.18□□□□□ -0.94
TSG101-205ENST00000540555 FKBP8Q14318 412 aa9.17□□□□□ -0.94
TSG101-205ENST00000540555 REM2Q8IYK8 340 aaPredicted RBP9.15□□□□□ -0.94
TSG101-205ENST00000540555 PIP4P2Q8N4L2 257 aa9.13□□□□□ -0.95
TSG101-205ENST00000540555 PABPN1Q86U42 306 aaKnown RBP eCLIP9.1□□□□□ -0.95
TSG101-205ENST00000540555 HAX1O00165 279 aa9.09□□□□□ -0.95
TSG101-205ENST00000540555 SPDYE4A6NLX3 237 aa9.07□□□□□ -0.96
TSG101-205ENST00000540555 OSCARQ8IYS5 282 aa9.07□□□□□ -0.96
TSG101-205ENST00000540555 FXR2P51116 673 aaKnown RBP eCLIP9.05□□□□□ -0.96
TSG101-205ENST00000540555 NACADO15069 1562 aa9.03□□□□□ -0.96
TSG101-205ENST00000540555 PITPNM1O00562 1244 aa9.01□□□□□ -0.97
TSG101-205ENST00000540555 CECR2Q9BXF3 1484 aa9□□□□□ -0.97
TSG101-205ENST00000540555 SPDYE2BA6NHP3 402 aa8.99□□□□□ -0.97
TSG101-205ENST00000540555 SPDYE6P0CI01 402 aa8.99□□□□□ -0.97
TSG101-205ENST00000540555 SPDYE2Q495Y8 402 aa8.99□□□□□ -0.97
TSG101-205ENST00000540555 PROM2Q8N271 834 aa8.99□□□□□ -0.97
TSG101-205ENST00000540555 ZNF692Q9BU19 519 aaPredicted RBP8.97□□□□□ -0.97
TSG101-205ENST00000540555 BICRAQ9NZM4 1560 aa8.96□□□□□ -0.97
TSG101-205ENST00000540555 SSUH2Q9Y2M2 353 aa8.96□□□□□ -0.98
TSG101-205ENST00000540555 EVX2Q03828 476 aa8.94□□□□□ -0.98
TSG101-205ENST00000540555 SHROOM4Q9ULL8 1493 aa8.89□□□□□ -0.99
TSG101-205ENST00000540555 CC2D2AQ9P2K1 1620 aa8.89□□□□□ -0.99
TSG101-205ENST00000540555 SPDYE1Q8NFV5 336 aaPredicted RBP8.83□□□□□ -1
TSG101-205ENST00000540555 CUX2O14529 1486 aa8.83□□□□□ -1
TSG101-205ENST00000540555 UNC13AQ9UPW8 1703 aa8.83□□□□□ -1
TSG101-205ENST00000540555 MYO15BQ96JP2 1530 aa8.82□□□□□ -1
TSG101-205ENST00000540555 FBXO3Q9UK99 471 aa8.79□□□□□ -1
TSG101-205ENST00000540555 EIF4G1Q04637 1599 aaKnown RBP8.78□□□□□ -1
TSG101-205ENST00000540555 C19orf67A6NJJ6 358 aa8.77□□□□□ -1.01
TSG101-205ENST00000540555 PRKAR2AP13861 404 aaKnown RBP8.77□□□□□ -1.01
TSG101-205ENST00000540555 LHX8Q68G74 356 aa8.75□□□□□ -1.01
TSG101-205ENST00000540555 GABBR2O75899 941 aa8.72□□□□□ -1.01
TSG101-205ENST00000540555 CLEC11AQ9Y240 323 aa8.72□□□□□ -1.01
TSG101-205ENST00000540555 STAG3Q9UJ98 1225 aa8.7□□□□□ -1.02
TSG101-205ENST00000540555 VASPP50552 380 aaPredicted RBP8.69□□□□□ -1.02
TSG101-205ENST00000540555 DCAF8L2P0C7V8 631 aa8.68□□□□□ -1.02
TSG101-205ENST00000540555 TRIM41Q8WV44 630 aa8.67□□□□□ -1.02
TSG101-205ENST00000540555 CLCN6P51797 869 aa8.62□□□□□ -1.03
TSG101-205ENST00000540555 IFNLR1Q8IU57 520 aaPredicted RBP8.62□□□□□ -1.03
TSG101-205ENST00000540555 PRR29P0C7W0 189 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms