RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 ARHGEF38Q9NXL2 777 aa6.59□□□□□ -1.35
SNHG1-211ENST00000539921 NKX1-2Q9UD57 310 aaPredicted RBP6.59□□□□□ -1.35
SNHG1-211ENST00000539921 CNOT8Q9UFF9 292 aaKnown RBP6.59□□□□□ -1.35
SNHG1-211ENST00000539921 KCNH3Q9ULD8 1083 aa6.59□□□□□ -1.35
SNHG1-211ENST00000539921 SPG7Q9UQ90 795 aa6.59□□□□□ -1.35
SNHG1-211ENST00000539921 NOSIPQ9Y314 301 aaKnown RBP6.59□□□□□ -1.35
SNHG1-211ENST00000539921 NOC2LQ9Y3T9 749 aaKnown RBP6.59□□□□□ -1.35
SNHG1-211ENST00000539921 SQORQ9Y6N5 450 aa6.59□□□□□ -1.35
SNHG1-211ENST00000539921 MROH1Q8NDA8 1641 aa6.58□□□□□ -1.36
SNHG1-211ENST00000539921 WNK3Q9BYP7 1800 aa6.58□□□□□ -1.36
SNHG1-211ENST00000539921 RGS13O14921 159 aa6.58□□□□□ -1.36
SNHG1-211ENST00000539921 GPR37O15354 613 aa6.58□□□□□ -1.36
SNHG1-211ENST00000539921 NDUFB5O43674 189 aa6.58□□□□□ -1.36
SNHG1-211ENST00000539921 ATP2C2O75185 946 aa6.58□□□□□ -1.36
SNHG1-211ENST00000539921 FARP2O94887 1054 aaPredicted RBP6.58□□□□□ -1.36
SNHG1-211ENST00000539921 NAT2P11245 290 aa6.58□□□□□ -1.36
SNHG1-211ENST00000539921 UBL4AP11441 157 aa6.58□□□□□ -1.36
SNHG1-211ENST00000539921 CPA1P15085 419 aa6.58□□□□□ -1.36
SNHG1-211ENST00000539921 CHN1P15882 459 aa6.58□□□□□ -1.36
SNHG1-211ENST00000539921 BMP6P22004 513 aa6.58□□□□□ -1.36
SNHG1-211ENST00000539921 NFKBIAP25963 317 aa6.58□□□□□ -1.36
SNHG1-211ENST00000539921 PTPN4P29074 926 aa6.58□□□□□ -1.36
SNHG1-211ENST00000539921 TKTP29401 623 aaKnown RBP6.58□□□□□ -1.36
SNHG1-211ENST00000539921 ECHS1P30084 290 aa6.58□□□□□ -1.36
SNHG1-211ENST00000539921 CSTF2P33240 577 aaKnown RBP eCLIP6.58□□□□□ -1.36
SNHG1-211ENST00000539921 RPS3AP61247 264 aaKnown RBP6.58□□□□□ -1.36
SNHG1-211ENST00000539921 ATP6V0D1P61421 351 aa6.58□□□□□ -1.36
SNHG1-211ENST00000539921 IRX4P78413 519 aa6.58□□□□□ -1.36
SNHG1-211ENST00000539921 DR1Q01658 176 aa6.58□□□□□ -1.36
SNHG1-211ENST00000539921 DSG1Q02413 1049 aa6.58□□□□□ -1.36
SNHG1-211ENST00000539921 FMR1Q06787 632 aaKnown RBP eCLIP6.58□□□□□ -1.36
SNHG1-211ENST00000539921 DHX9Q08211 1270 aaKnown RBP6.58□□□□□ -1.36
SNHG1-211ENST00000539921 DMPKQ09013 629 aa6.58□□□□□ -1.36
SNHG1-211ENST00000539921 DNAJC3Q13217 504 aa6.58□□□□□ -1.36
SNHG1-211ENST00000539921 LPIN1Q14693 890 aa6.58□□□□□ -1.36
SNHG1-211ENST00000539921 PTPAQ15257 358 aa6.58□□□□□ -1.36
SNHG1-211ENST00000539921 SPA17Q15506 151 aa6.58□□□□□ -1.36
SNHG1-211ENST00000539921 CCDC6Q16204 474 aa6.58□□□□□ -1.36
SNHG1-211ENST00000539921 UAP1Q16222 522 aaPredicted RBP6.58□□□□□ -1.36
SNHG1-211ENST00000539921 KRT71Q3SY84 523 aa6.58□□□□□ -1.36
SNHG1-211ENST00000539921 ANKDD1AQ495B1 522 aa6.58□□□□□ -1.36
SNHG1-211ENST00000539921 ZNF362Q5T0B9 420 aaPredicted RBP6.58□□□□□ -1.36
SNHG1-211ENST00000539921 ZFYVE27Q5T4F4 411 aa6.58□□□□□ -1.36
SNHG1-211ENST00000539921 CCNJQ5T5M9 372 aa6.58□□□□□ -1.36
SNHG1-211ENST00000539921 TCERG1LQ5VWI1 586 aa6.58□□□□□ -1.36
SNHG1-211ENST00000539921 FAM91A1Q658Y4 838 aa6.58□□□□□ -1.36
SNHG1-211ENST00000539921 SNRNP48Q6IEG0 339 aaKnown RBP6.58□□□□□ -1.36
SNHG1-211ENST00000539921 LVRNQ6Q4G3 990 aa6.58□□□□□ -1.36
SNHG1-211ENST00000539921 INTS8Q75QN2 995 aaKnown RBP6.58□□□□□ -1.36
SNHG1-211ENST00000539921 KRT28Q7Z3Y7 464 aa6.58□□□□□ -1.36
SNHG1-211ENST00000539921 TMC3Q7Z5M5 1100 aa6.58□□□□□ -1.36
SNHG1-211ENST00000539921 ITIH5Q86UX2 942 aa6.58□□□□□ -1.36
SNHG1-211ENST00000539921 TRIM50Q86XT4 487 aa6.58□□□□□ -1.36
SNHG1-211ENST00000539921 TREML1Q86YW5 311 aa6.58□□□□□ -1.36
SNHG1-211ENST00000539921 GRAMD2AQ8IUY3 354 aa6.58□□□□□ -1.36
SNHG1-211ENST00000539921 ERI1Q8IV48 349 aaKnown RBP6.58□□□□□ -1.36
SNHG1-211ENST00000539921 WDR75Q8IWA0 830 aaKnown RBP6.58□□□□□ -1.36
SNHG1-211ENST00000539921 TERB1Q8NA31 727 aa6.58□□□□□ -1.36
SNHG1-211ENST00000539921 MINDY2Q8NBR6 621 aa6.58□□□□□ -1.36
SNHG1-211ENST00000539921 GABPB2Q8TAK5 448 aaPredicted RBP6.58□□□□□ -1.36
SNHG1-211ENST00000539921 OXER1Q8TDS5 423 aa6.58□□□□□ -1.36
SNHG1-211ENST00000539921 SCG3Q8WXD2 468 aaKnown RBP6.58□□□□□ -1.36
SNHG1-211ENST00000539921 CASKIN2Q8WXE0 1202 aa6.58□□□□□ -1.36
SNHG1-211ENST00000539921 SLC39A7Q92504 469 aa6.58□□□□□ -1.36
SNHG1-211ENST00000539921 CDKL2Q92772 493 aa6.58□□□□□ -1.36
SNHG1-211ENST00000539921 MPP4Q96JB8 637 aa6.58□□□□□ -1.36
SNHG1-211ENST00000539921 CAPZA3Q96KX2 299 aa6.58□□□□□ -1.36
SNHG1-211ENST00000539921 INPP4AQ96PE3 977 aaPredicted RBP6.58□□□□□ -1.36
SNHG1-211ENST00000539921 TCF12Q99081 682 aa6.58□□□□□ -1.36
SNHG1-211ENST00000539921 ELAC2Q9BQ52 826 aaKnown RBP6.58□□□□□ -1.36
SNHG1-211ENST00000539921 TXLNGYQ9BZA5 131 aa6.58□□□□□ -1.36
SNHG1-211ENST00000539921 PPP1R12CQ9BZL4 782 aa6.58□□□□□ -1.36
SNHG1-211ENST00000539921 EDEM3Q9BZQ6 932 aa6.58□□□□□ -1.36
SNHG1-211ENST00000539921 RBM38Q9H0Z9 239 aaKnown RBP6.58□□□□□ -1.36
SNHG1-211ENST00000539921 GGNBP2Q9H3C7 697 aa6.58□□□□□ -1.36
SNHG1-211ENST00000539921 C17orf75Q9HAS0 396 aa6.58□□□□□ -1.36
SNHG1-211ENST00000539921 SLC38A10Q9HBR0 1119 aa6.58□□□□□ -1.36
SNHG1-211ENST00000539921 GPAMQ9HCL2 828 aa6.58□□□□□ -1.36
SNHG1-211ENST00000539921 EPB41L5Q9HCM4 733 aa6.58□□□□□ -1.36
SNHG1-211ENST00000539921 NLRC4Q9NPP4 1024 aa6.58□□□□□ -1.36
SNHG1-211ENST00000539921 GINM1Q9NU53 330 aa6.58□□□□□ -1.36
SNHG1-211ENST00000539921 ARMC1Q9NVT9 282 aa6.58□□□□□ -1.36
SNHG1-211ENST00000539921 BABAM1Q9NWV8 329 aa6.58□□□□□ -1.36
SNHG1-211ENST00000539921 RASAL2Q9UJF2 1139 aa6.58□□□□□ -1.36
SNHG1-211ENST00000539921 METRNQ9UJH8 293 aa6.58□□□□□ -1.36
SNHG1-211ENST00000539921 ZMYND8Q9ULU4 1186 aaPredicted RBP6.58□□□□□ -1.36
SNHG1-211ENST00000539921 NOVA2Q9UNW9 492 aaKnown RBP6.58□□□□□ -1.36
SNHG1-211ENST00000539921 B3GNT3Q9Y2A9 372 aa6.58□□□□□ -1.36
SNHG1-211ENST00000539921 USH1CQ9Y6N9 552 aa6.58□□□□□ -1.36
SNHG1-211ENST00000539921 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.58□□□□□ -1.36
SNHG1-211ENST00000539921 DLG5Q8TDM6 1919 aa6.58□□□□□ -1.36
SNHG1-211ENST00000539921 DISP2A7MBM2 1401 aa6.58□□□□□ -1.36
SNHG1-211ENST00000539921 SOS2Q07890 1332 aaPredicted RBP6.57□□□□□ -1.36
SNHG1-211ENST00000539921 A0A087WWV3 80 aa6.57□□□□□ -1.36
SNHG1-211ENST00000539921 LGALS16A8MUM7 142 aa6.57□□□□□ -1.36
SNHG1-211ENST00000539921 BTNL10A8MVZ5 291 aa6.57□□□□□ -1.36
SNHG1-211ENST00000539921 BTBD18B2RXH4 712 aa6.57□□□□□ -1.36
SNHG1-211ENST00000539921 KIF28PB7ZC32 967 aa6.57□□□□□ -1.36
SNHG1-211ENST00000539921 ENC1O14682 589 aa6.57□□□□□ -1.36
SNHG1-211ENST00000539921 MAGEB2O15479 319 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms