RNA–Protein interactions for RNA: ENST00000537965.5

SNHG1-207, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-207ENST00000537965 TANC1Q9C0D5 1861 aa6.28□□□□□ -1.4
SNHG1-207ENST00000537965 MUC6Q6W4X9 2439 aa6.28□□□□□ -1.4
SNHG1-207ENST00000537965 PIEZO1Q92508 2521 aa6.28□□□□□ -1.4
SNHG1-207ENST00000537965 MYO7AQ13402 2215 aa6.28□□□□□ -1.4
SNHG1-207ENST00000537965 IGKV6D-41A0A0C4DH26 115 aa6.28□□□□□ -1.4
SNHG1-207ENST00000537965 SCO2A0A1W2PP80 73 aa6.28□□□□□ -1.4
SNHG1-207ENST00000537965 HMX2A2RU54 273 aa6.28□□□□□ -1.4
SNHG1-207ENST00000537965 TMEM232C9JQI7 657 aa6.28□□□□□ -1.4
SNHG1-207ENST00000537965 NKRFO15226 690 aaKnown RBP eCLIP6.28□□□□□ -1.4
SNHG1-207ENST00000537965 IGLV1-40P01703 118 aa6.28□□□□□ -1.4
SNHG1-207ENST00000537965 ATP2A2P16615 1042 aaKnown RBP6.28□□□□□ -1.4
SNHG1-207ENST00000537965 PLA2G5P39877 138 aa6.28□□□□□ -1.4
SNHG1-207ENST00000537965 SLC1A4P43007 532 aa6.28□□□□□ -1.4
SNHG1-207ENST00000537965 CPT1AP50416 773 aa6.28□□□□□ -1.4
SNHG1-207ENST00000537965 CCL23P55773 120 aa6.28□□□□□ -1.4
SNHG1-207ENST00000537965 BEX3Q00994 111 aa6.28□□□□□ -1.4
SNHG1-207ENST00000537965 CNTN2Q02246 1040 aa6.28□□□□□ -1.4
SNHG1-207ENST00000537965 RNF43Q68DV7 783 aa6.28□□□□□ -1.4
SNHG1-207ENST00000537965 RCSD1Q6JBY9 416 aa6.28□□□□□ -1.4
SNHG1-207ENST00000537965 TRIM42Q8IWZ5 723 aa6.28□□□□□ -1.4
SNHG1-207ENST00000537965 KBTBD3Q8NAB2 608 aa6.28□□□□□ -1.4
SNHG1-207ENST00000537965 CEP95Q96GE4 821 aa6.28□□□□□ -1.4
SNHG1-207ENST00000537965 SLC9A7Q96T83 725 aa6.28□□□□□ -1.4
SNHG1-207ENST00000537965 NOC4LQ9BVI4 516 aaKnown RBP6.28□□□□□ -1.4
SNHG1-207ENST00000537965 KATNBL1Q9H079 304 aa6.28□□□□□ -1.4
SNHG1-207ENST00000537965 A1CFQ9NQ94 594 aaKnown RBP6.28□□□□□ -1.4
SNHG1-207ENST00000537965 HOMER2Q9NSB8 354 aa6.28□□□□□ -1.4
SNHG1-207ENST00000537965 ECHDC1Q9NTX5 307 aa6.28□□□□□ -1.4
SNHG1-207ENST00000537965 RNF146Q9NTX7 359 aa6.28□□□□□ -1.4
SNHG1-207ENST00000537965 LRRC37A2A6NM11 1700 aa6.28□□□□□ -1.4
SNHG1-207ENST00000537965 SIP14410 1827 aa6.27□□□□□ -1.41
SNHG1-207ENST00000537965 ERC2O15083 957 aa6.27□□□□□ -1.41
SNHG1-207ENST00000537965 CTAGE5O15320 804 aa6.27□□□□□ -1.41
SNHG1-207ENST00000537965 RNF113AO15541 343 aaKnown RBP6.27□□□□□ -1.41
SNHG1-207ENST00000537965 GPAA1O43292 621 aa6.27□□□□□ -1.41
SNHG1-207ENST00000537965 ADCY6O43306 1168 aa6.27□□□□□ -1.41
SNHG1-207ENST00000537965 GAS2O43903 313 aaKnown RBP6.27□□□□□ -1.41
SNHG1-207ENST00000537965 B4GALT4O60513 344 aa6.27□□□□□ -1.41
SNHG1-207ENST00000537965 PARNO95453 639 aaKnown RBP6.27□□□□□ -1.41
SNHG1-207ENST00000537965 CTSBP07858 339 aa6.27□□□□□ -1.41
SNHG1-207ENST00000537965 ALAS1P13196 640 aa6.27□□□□□ -1.41
SNHG1-207ENST00000537965 PDIA4P13667 645 aaKnown RBP6.27□□□□□ -1.41
SNHG1-207ENST00000537965 DRD2P14416 443 aa6.27□□□□□ -1.41
SNHG1-207ENST00000537965 TFAP4Q01664 338 aa6.27□□□□□ -1.41
SNHG1-207ENST00000537965 PTPN11Q06124 597 aaPredicted RBP6.27□□□□□ -1.41
SNHG1-207ENST00000537965 SOX4Q06945 474 aaPredicted RBP6.27□□□□□ -1.41
SNHG1-207ENST00000537965 BFSP2Q13515 415 aa6.27□□□□□ -1.41
SNHG1-207ENST00000537965 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.27□□□□□ -1.414e-12■■□□□ 12.4
SNHG1-207ENST00000537965 DUSP28Q4G0W2 176 aa6.27□□□□□ -1.41
SNHG1-207ENST00000537965 HP1BP3Q5SSJ5 553 aaPredicted RBP6.27□□□□□ -1.41
SNHG1-207ENST00000537965 BEND4Q6ZU67 534 aa6.27□□□□□ -1.41
SNHG1-207ENST00000537965 STK11IPQ8N1F8 1099 aa6.27□□□□□ -1.41
SNHG1-207ENST00000537965 FGD4Q96M96 766 aa6.27□□□□□ -1.41
SNHG1-207ENST00000537965 CORO1BQ9BR76 489 aa6.27□□□□□ -1.41
SNHG1-207ENST00000537965 BCO2Q9BYV7 579 aa6.27□□□□□ -1.41
SNHG1-207ENST00000537965 NAPBQ9H115 298 aa6.27□□□□□ -1.41
SNHG1-207ENST00000537965 ALDH8A1Q9H2A2 487 aaPredicted RBP6.27□□□□□ -1.41
SNHG1-207ENST00000537965 KCNF1Q9H3M0 494 aa6.27□□□□□ -1.41
SNHG1-207ENST00000537965 CYP39A1Q9NYL5 469 aa6.27□□□□□ -1.41
SNHG1-207ENST00000537965 LMCD1Q9NZU5 365 aa6.27□□□□□ -1.41
SNHG1-207ENST00000537965 PLIN4Q96Q06 1357 aa6.27□□□□□ -1.41
SNHG1-207ENST00000537965 NLRC5Q86WI3 1866 aa6.26□□□□□ -1.41
SNHG1-207ENST00000537965 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.26□□□□□ -1.41
SNHG1-207ENST00000537965 TSPY2A6NKD2 308 aa6.26□□□□□ -1.41
SNHG1-207ENST00000537965 SMIM22K7EJ46 135 aa6.26□□□□□ -1.41
SNHG1-207ENST00000537965 BAIAP3O94812 1187 aa6.26□□□□□ -1.41
SNHG1-207ENST00000537965 MCCP23508 829 aa6.26□□□□□ -1.41
SNHG1-207ENST00000537965 AP3B2Q13367 1082 aa6.26□□□□□ -1.41
SNHG1-207ENST00000537965 LRP8Q14114 963 aa6.26□□□□□ -1.41
SNHG1-207ENST00000537965 SGO2Q562F6 1265 aa6.26□□□□□ -1.41
SNHG1-207ENST00000537965 TAPT1Q6NXT6 567 aa6.26□□□□□ -1.41
SNHG1-207ENST00000537965 NFRKBQ6P4R8 1299 aa6.26□□□□□ -1.41
SNHG1-207ENST00000537965 NSMFQ6X4W1 530 aa6.26□□□□□ -1.41
SNHG1-207ENST00000537965 DTHD1Q6ZMT9 781 aa6.26□□□□□ -1.41
SNHG1-207ENST00000537965 SIRT2Q8IXJ6 389 aa6.26□□□□□ -1.41
SNHG1-207ENST00000537965 IFNL3Q8IZI9 196 aa6.26□□□□□ -1.41
SNHG1-207ENST00000537965 LRRC47Q8N1G4 583 aaKnown RBP6.26□□□□□ -1.41
SNHG1-207ENST00000537965 MORC4Q8TE76 937 aa6.26□□□□□ -1.41
SNHG1-207ENST00000537965 FBF1Q8TES7 1133 aa6.26□□□□□ -1.41
SNHG1-207ENST00000537965 OSBP2Q969R2 916 aa6.26□□□□□ -1.41
SNHG1-207ENST00000537965 MTG1Q9BT17 334 aaPredicted RBP6.26□□□□□ -1.41
SNHG1-207ENST00000537965 WDR11Q9BZH6 1224 aa6.26□□□□□ -1.41
SNHG1-207ENST00000537965 FTOQ9C0B1 505 aaKnown RBP eCLIP6.26□□□□□ -1.41
SNHG1-207ENST00000537965 MAF1Q9H063 256 aa6.26□□□□□ -1.41
SNHG1-207ENST00000537965 TRPV6Q9H1D0 765 aa6.26□□□□□ -1.41
SNHG1-207ENST00000537965 WNT8AQ9H1J5 351 aa6.26□□□□□ -1.41
SNHG1-207ENST00000537965 ZFP64Q9NPA5 681 aa6.26□□□□□ -1.41
SNHG1-207ENST00000537965 CCPG1Q9ULG6 757 aa6.26□□□□□ -1.41
SNHG1-207ENST00000537965 STX8Q9UNK0 236 aa6.26□□□□□ -1.41
SNHG1-207ENST00000537965 YBX2Q9Y2T7 364 aaKnown RBP6.26□□□□□ -1.41
SNHG1-207ENST00000537965 PTPRSQ13332 1948 aa6.26□□□□□ -1.41
SNHG1-207ENST00000537965 ASTN1O14525 1302 aa6.25□□□□□ -1.41
SNHG1-207ENST00000537965 GRIN2DO15399 1336 aa6.25□□□□□ -1.41
SNHG1-207ENST00000537965 TNKSO95271 1327 aa6.25□□□□□ -1.41
SNHG1-207ENST00000537965 SPTBN5Q9NRC6 3674 aaKnown RBP6.25□□□□□ -1.41
SNHG1-207ENST00000537965 RBM47A0AV96 593 aaKnown RBP6.25□□□□□ -1.41
SNHG1-207ENST00000537965 EFCAB14O75071 495 aa6.25□□□□□ -1.41
SNHG1-207ENST00000537965 PRDM1O75626 825 aa6.25□□□□□ -1.41
SNHG1-207ENST00000537965 ECEL1O95672 775 aa6.25□□□□□ -1.41
SNHG1-207ENST00000537965 ICAM1P05362 532 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms