RNA–Protein interactions for RNA: ENST00000535038.1

TNFRSF1A-206, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-206ENST00000535038 ZNF532Q9HCE3 1301 aa6.8□□□□□ -1.32
TNFRSF1A-206ENST00000535038 A0A0G2JLL6 359 aaPredicted RBP6.8□□□□□ -1.32
TNFRSF1A-206ENST00000535038 GOLGA8BA8MQT2 603 aa6.8□□□□□ -1.32
TNFRSF1A-206ENST00000535038 GSG1L2A8MUP6 293 aa6.8□□□□□ -1.32
TNFRSF1A-206ENST00000535038 N4BP3O15049 544 aa6.8□□□□□ -1.32
TNFRSF1A-206ENST00000535038 RANBP6O60518 1105 aaKnown RBP6.8□□□□□ -1.32
TNFRSF1A-206ENST00000535038 GREM1O60565 184 aa6.8□□□□□ -1.32
TNFRSF1A-206ENST00000535038 TRIM13O60858 407 aa6.8□□□□□ -1.32
TNFRSF1A-206ENST00000535038 PPP6R2O75170 966 aa6.8□□□□□ -1.32
TNFRSF1A-206ENST00000535038 CAMTA2O94983 1202 aa6.8□□□□□ -1.32
TNFRSF1A-206ENST00000535038 CMA1P23946 247 aa6.8□□□□□ -1.32
TNFRSF1A-206ENST00000535038 GPTP24298 496 aa6.8□□□□□ -1.32
TNFRSF1A-206ENST00000535038 U2AF2P26368 475 aaKnown RBP eCLIP6.8□□□□□ -1.32
TNFRSF1A-206ENST00000535038 CCNFP41002 786 aa6.8□□□□□ -1.32
TNFRSF1A-206ENST00000535038 LIFRP42702 1097 aa6.8□□□□□ -1.32
TNFRSF1A-206ENST00000535038 NDUFA8P51970 172 aa6.8□□□□□ -1.32
TNFRSF1A-206ENST00000535038 RCAN1P53805 252 aa6.8□□□□□ -1.32
TNFRSF1A-206ENST00000535038 EPHB3P54753 998 aa6.8□□□□□ -1.32
TNFRSF1A-206ENST00000535038 GUCY1B3Q02153 619 aa6.8□□□□□ -1.32
TNFRSF1A-206ENST00000535038 NCAPHQ15003 741 aa6.8□□□□□ -1.32
TNFRSF1A-206ENST00000535038 SLC39A14Q15043 492 aa6.8□□□□□ -1.32
TNFRSF1A-206ENST00000535038 GORABQ5T7V8 394 aa6.8□□□□□ -1.32
TNFRSF1A-206ENST00000535038 SLC9C2Q5TAH2 1124 aa6.8□□□□□ -1.32
TNFRSF1A-206ENST00000535038 ANO1Q5XXA6 986 aa6.8□□□□□ -1.32
TNFRSF1A-206ENST00000535038 APOA5Q6Q788 366 aa6.8□□□□□ -1.32
TNFRSF1A-206ENST00000535038 CCDC73Q6ZRK6 1079 aa6.8□□□□□ -1.32
TNFRSF1A-206ENST00000535038 CCDC186Q7Z3E2 898 aa6.8□□□□□ -1.32
TNFRSF1A-206ENST00000535038 CACTINQ8WUQ7 758 aaKnown RBP6.8□□□□□ -1.32
TNFRSF1A-206ENST00000535038 ATG4CQ96DT6 458 aa6.8□□□□□ -1.32
TNFRSF1A-206ENST00000535038 OSBPL5Q9H0X9 879 aaPredicted RBP6.8□□□□□ -1.32
TNFRSF1A-206ENST00000535038 HSD3B7Q9H2F3 369 aa6.8□□□□□ -1.32
TNFRSF1A-206ENST00000535038 CNTD2Q9H8S5 307 aa6.8□□□□□ -1.32
TNFRSF1A-206ENST00000535038 ANO10Q9NW15 660 aa6.8□□□□□ -1.32
TNFRSF1A-206ENST00000535038 ORC3Q9UBD5 711 aaPredicted RBP6.8□□□□□ -1.32
TNFRSF1A-206ENST00000535038 TNFRSF10DQ9UBN6 386 aa6.8□□□□□ -1.32
TNFRSF1A-206ENST00000535038 NRBP1Q9UHY1 535 aa6.8□□□□□ -1.32
TNFRSF1A-206ENST00000535038 TRMT112Q9UI30 125 aaKnown RBP6.8□□□□□ -1.32
TNFRSF1A-206ENST00000535038 TUBE1Q9UJT0 475 aa6.8□□□□□ -1.32
TNFRSF1A-206ENST00000535038 COL1A1P02452 1464 aaPredicted RBP6.79□□□□□ -1.32
TNFRSF1A-206ENST00000535038 MROH7-TTC4A0A0A0MT08 1334 aa6.79□□□□□ -1.32
TNFRSF1A-206ENST00000535038 ABLIM1O14639 778 aa6.79□□□□□ -1.32
TNFRSF1A-206ENST00000535038 SPTLC2O15270 562 aa6.79□□□□□ -1.32
TNFRSF1A-206ENST00000535038 NEMFO60524 1076 aa6.79□□□□□ -1.32
TNFRSF1A-206ENST00000535038 KINO60870 393 aaKnown RBP6.79□□□□□ -1.32
TNFRSF1A-206ENST00000535038 WDHD1O75717 1129 aaPredicted RBP6.79□□□□□ -1.32
TNFRSF1A-206ENST00000535038 NTSR2O95665 410 aa6.79□□□□□ -1.32
TNFRSF1A-206ENST00000535038 IFNAR1P17181 557 aa6.79□□□□□ -1.32
TNFRSF1A-206ENST00000535038 ERCC3P19447 782 aa6.79□□□□□ -1.32
TNFRSF1A-206ENST00000535038 ENDOUP21128 410 aaKnown RBP6.79□□□□□ -1.32
TNFRSF1A-206ENST00000535038 CRKP46108 304 aa6.79□□□□□ -1.32
TNFRSF1A-206ENST00000535038 AFF3P51826 1226 aaKnown RBP6.79□□□□□ -1.32
TNFRSF1A-206ENST00000535038 ERVFRD-1P60508 538 aa6.79□□□□□ -1.32
TNFRSF1A-206ENST00000535038 YBX1P67809 324 aaKnown RBP6.79□□□□□ -1.32
TNFRSF1A-206ENST00000535038 CCZ1BP86790 482 aa6.79□□□□□ -1.32
TNFRSF1A-206ENST00000535038 CCZ1P86791 482 aaPredicted RBP6.79□□□□□ -1.32
TNFRSF1A-206ENST00000535038 LRMPQ12912 555 aa6.79□□□□□ -1.32
TNFRSF1A-206ENST00000535038 RASGRF1Q13972 1273 aa6.79□□□□□ -1.32
TNFRSF1A-206ENST00000535038 SYCP1Q15431 976 aa6.79□□□□□ -1.32
TNFRSF1A-206ENST00000535038 TAF7LQ5H9L4 462 aa6.79□□□□□ -1.32
TNFRSF1A-206ENST00000535038 SUSD4Q5VX71 490 aa6.79□□□□□ -1.32
TNFRSF1A-206ENST00000535038 GALNT18Q6P9A2 607 aa6.79□□□□□ -1.32
TNFRSF1A-206ENST00000535038 NLRC3Q7RTR2 1065 aa6.79□□□□□ -1.32
TNFRSF1A-206ENST00000535038 MTERF4Q7Z6M4 381 aaKnown RBP6.79□□□□□ -1.32
TNFRSF1A-206ENST00000535038 RALYLQ86SE5 291 aaKnown RBP6.79□□□□□ -1.32
TNFRSF1A-206ENST00000535038 IFNL3Q8IZI9 196 aa6.79□□□□□ -1.32
TNFRSF1A-206ENST00000535038 SPATA5Q8NB90 893 aa6.79□□□□□ -1.32
TNFRSF1A-206ENST00000535038 SPC24Q8NBT2 197 aa6.79□□□□□ -1.32
TNFRSF1A-206ENST00000535038 ZNF296Q8WUU4 475 aaPredicted RBP6.79□□□□□ -1.32
TNFRSF1A-206ENST00000535038 STAG1Q8WVM7 1258 aa6.79□□□□□ -1.32
TNFRSF1A-206ENST00000535038 ANKRD7Q92527 254 aa6.79□□□□□ -1.32
TNFRSF1A-206ENST00000535038 EHMT1Q9H9B1 1298 aa6.79□□□□□ -1.32
TNFRSF1A-206ENST00000535038 CHST7Q9NS84 486 aa6.79□□□□□ -1.32
TNFRSF1A-206ENST00000535038 GJB4Q9NTQ9 266 aa6.79□□□□□ -1.32
TNFRSF1A-206ENST00000535038 ANAPC4Q9UJX5 808 aa6.79□□□□□ -1.32
TNFRSF1A-206ENST00000535038 MINPP1Q9UNW1 487 aa6.79□□□□□ -1.32
TNFRSF1A-206ENST00000535038 MYH6P13533 1939 aa6.79□□□□□ -1.32
TNFRSF1A-206ENST00000535038 MAST2Q6P0Q8 1798 aa6.79□□□□□ -1.32
TNFRSF1A-206ENST00000535038 LTBP4Q8N2S1 1624 aa6.79□□□□□ -1.32
TNFRSF1A-206ENST00000535038 SPATA31A1Q5TZJ5 1347 aa6.78□□□□□ -1.32
TNFRSF1A-206ENST00000535038 DUOX1Q9NRD9 1551 aa6.78□□□□□ -1.32
TNFRSF1A-206ENST00000535038 LAMB1P07942 1786 aa6.78□□□□□ -1.32
TNFRSF1A-206ENST00000535038 A0A1B0GVL5 298 aa6.78□□□□□ -1.32
TNFRSF1A-206ENST00000535038 FADS2P1A8MWK0 482 aa6.78□□□□□ -1.32
TNFRSF1A-206ENST00000535038 IKBKBO14920 756 aa6.78□□□□□ -1.32
TNFRSF1A-206ENST00000535038 FOXD2O60548 495 aaPredicted RBP6.78□□□□□ -1.32
TNFRSF1A-206ENST00000535038 CDKL5O76039 1030 aa6.78□□□□□ -1.32
TNFRSF1A-206ENST00000535038 MPOP05164 745 aa6.78□□□□□ -1.32
TNFRSF1A-206ENST00000535038 FGRP09769 529 aa6.78□□□□□ -1.32
TNFRSF1A-206ENST00000535038 SLC5A1P13866 664 aa6.78□□□□□ -1.32
TNFRSF1A-206ENST00000535038 ARL4AP40617 200 aa6.78□□□□□ -1.32
TNFRSF1A-206ENST00000535038 KCNJ6P48051 423 aa6.78□□□□□ -1.32
TNFRSF1A-206ENST00000535038 ME1P48163 572 aa6.78□□□□□ -1.32
TNFRSF1A-206ENST00000535038 CEBPZQ03701 1054 aaKnown RBP6.78□□□□□ -1.32
TNFRSF1A-206ENST00000535038 ITPK1Q13572 414 aa6.78□□□□□ -1.32
TNFRSF1A-206ENST00000535038 NFIXQ14938 502 aa6.78□□□□□ -1.32
TNFRSF1A-206ENST00000535038 HSF5Q4G112 596 aaPredicted RBP6.78□□□□□ -1.32
TNFRSF1A-206ENST00000535038 PARP10Q53GL7 1025 aa6.78□□□□□ -1.32
TNFRSF1A-206ENST00000535038 RESP18Q5W5W9 173 aa6.78□□□□□ -1.32
TNFRSF1A-206ENST00000535038 KRT40Q6A162 431 aa6.78□□□□□ -1.32
TNFRSF1A-206ENST00000535038 SHC4Q6S5L8 630 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms