RNA–Protein interactions for RNA: ENST00000535038.1

TNFRSF1A-206, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-206ENST00000535038 AEBP2Q6ZN18 517 aaPredicted RBP27.56■■■□□ 2
TNFRSF1A-206ENST00000535038 CHIC1Q5VXU3 224 aa26.31■■□□□ 1.8
TNFRSF1A-206ENST00000535038 SENP3Q9H4L4 574 aaPredicted RBP23.53■■□□□ 1.36
TNFRSF1A-206ENST00000535038 PHF23Q9BUL5 403 aaPredicted RBP23.23■■□□□ 1.31
TNFRSF1A-206ENST00000535038 FOXD1Q16676 465 aa21.88■■□□□ 1.09
TNFRSF1A-206ENST00000535038 PLPPR3Q6T4P5 718 aa21.1■□□□□ 0.97
TNFRSF1A-206ENST00000535038 PPP6R1Q9UPN7 881 aa20.55■□□□□ 0.88
TNFRSF1A-206ENST00000535038 PIAS4Q8N2W9 510 aaPredicted RBP20.51■□□□□ 0.87
TNFRSF1A-206ENST00000535038 ADRA2BP18089 450 aa20.5■□□□□ 0.87
TNFRSF1A-206ENST00000535038 MSH5O43196 834 aa20.47■□□□□ 0.87
TNFRSF1A-206ENST00000535038 POTEDQ86YR6 584 aa19.74■□□□□ 0.75
TNFRSF1A-206ENST00000535038 SCAF1Q9H7N4 1312 aaKnown RBP18.8■□□□□ 0.6
TNFRSF1A-206ENST00000535038 MAPK8IP2Q13387 824 aaPredicted RBP18.79■□□□□ 0.6
TNFRSF1A-206ENST00000535038 DMRT2Q9Y5R5 561 aa18.66■□□□□ 0.58
TNFRSF1A-206ENST00000535038 PPP4R3CPQ6ZMV5 832 aa18.5■□□□□ 0.55
TNFRSF1A-206ENST00000535038 CNKSR2Q8WXI2 1034 aa18.13■□□□□ 0.49
TNFRSF1A-206ENST00000535038 HOXD11P31277 338 aaPredicted RBP18.02■□□□□ 0.48
TNFRSF1A-206ENST00000535038 DCAF8L1A6NGE4 600 aa17.93■□□□□ 0.46
TNFRSF1A-206ENST00000535038 RNF216Q9NWF9 866 aaPredicted RBP17.93■□□□□ 0.46
TNFRSF1A-206ENST00000535038 NCBP3Q53F19 620 aaKnown RBP17.85■□□□□ 0.45
TNFRSF1A-206ENST00000535038 NPM3O75607 178 aaKnown RBP17.56■□□□□ 0.4
TNFRSF1A-206ENST00000535038 CACNB1Q02641 598 aaPredicted RBP17.49■□□□□ 0.39
TNFRSF1A-206ENST00000535038 RNF39Q9H2S5 420 aa17.45■□□□□ 0.38
TNFRSF1A-206ENST00000535038 DNAJC5BQ9UF47 199 aa17.38■□□□□ 0.37
TNFRSF1A-206ENST00000535038 KCNA4P22459 653 aa17.33■□□□□ 0.36
TNFRSF1A-206ENST00000535038 C1QBPQ07021 282 aaKnown RBP17.22■□□□□ 0.35
TNFRSF1A-206ENST00000535038 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.2■□□□□ 0.34
TNFRSF1A-206ENST00000535038 U3KPZ7 1027 aaPredicted RBP16.82■□□□□ 0.28
TNFRSF1A-206ENST00000535038 SLC4A2P04920 1241 aa16.72■□□□□ 0.27
TNFRSF1A-206ENST00000535038 SPINK5Q9NQ38 1064 aaPredicted RBP16.55■□□□□ 0.24
TNFRSF1A-206ENST00000535038 CAPN15O75808 1086 aa16.54■□□□□ 0.24
TNFRSF1A-206ENST00000535038 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.43■□□□□ 0.22
TNFRSF1A-206ENST00000535038 HNRNPUL2Q1KMD3 747 aaKnown RBP16.43■□□□□ 0.22
TNFRSF1A-206ENST00000535038 APLP2Q06481 763 aa16.42■□□□□ 0.22
TNFRSF1A-206ENST00000535038 SLC4A1APQ9BWU0 796 aaKnown RBP16.41■□□□□ 0.22
TNFRSF1A-206ENST00000535038 DSG3P32926 999 aa16.39■□□□□ 0.21
TNFRSF1A-206ENST00000535038 SAMD1Q6SPF0 538 aaPredicted RBP16.34■□□□□ 0.21
TNFRSF1A-206ENST00000535038 TRHP20396 242 aaPredicted RBP16.3■□□□□ 0.2
TNFRSF1A-206ENST00000535038 ZNF219Q9P2Y4 722 aaPredicted RBP16.29■□□□□ 0.2
TNFRSF1A-206ENST00000535038 MYCNP04198 464 aaPredicted RBP16.26■□□□□ 0.19
TNFRSF1A-206ENST00000535038 ABCB7O75027 752 aa16.16■□□□□ 0.18
TNFRSF1A-206ENST00000535038 FOXD4L1Q9NU39 408 aa16.16■□□□□ 0.18
TNFRSF1A-206ENST00000535038 ZBTB22O15209 634 aa15.92■□□□□ 0.14
TNFRSF1A-206ENST00000535038 POLA2Q14181 598 aa15.87■□□□□ 0.13
TNFRSF1A-206ENST00000535038 ATF5Q9Y2D1 282 aaPredicted RBP15.84■□□□□ 0.13
TNFRSF1A-206ENST00000535038 RBM42Q9BTD8 480 aaKnown RBP15.67■□□□□ 0.1
TNFRSF1A-206ENST00000535038 ATXN8OSP0DMR3 200 aa15.64■□□□□ 0.09
TNFRSF1A-206ENST00000535038 ZBTB12Q9Y330 459 aaPredicted RBP15.59■□□□□ 0.09
TNFRSF1A-206ENST00000535038 POTEHQ6S545 545 aa15.51■□□□□ 0.07
TNFRSF1A-206ENST00000535038 OSCARQ8IYS5 282 aa15.38■□□□□ 0.05
TNFRSF1A-206ENST00000535038 AKT1S1Q96B36 256 aa15.32■□□□□ 0.04
TNFRSF1A-206ENST00000535038 CSRNP3Q8WYN3 585 aa15.31■□□□□ 0.04
TNFRSF1A-206ENST00000535038 FBLN2P98095 1184 aa15.27■□□□□ 0.04
TNFRSF1A-206ENST00000535038 CHRDL2Q6WN34 429 aa15.26■□□□□ 0.03
TNFRSF1A-206ENST00000535038 EHMT2Q96KQ7 1210 aa15.21■□□□□ 0.03
TNFRSF1A-206ENST00000535038 REM2Q8IYK8 340 aaPredicted RBP15.16■□□□□ 0.02
TNFRSF1A-206ENST00000535038 MKRN4PQ13434 485 aaPredicted RBP15.12■□□□□ 0.01
TNFRSF1A-206ENST00000535038 SPDYE2BA6NHP3 402 aa15.11■□□□□ 0.01
TNFRSF1A-206ENST00000535038 SPDYE6P0CI01 402 aa15.11■□□□□ 0.01
TNFRSF1A-206ENST00000535038 SPDYE2Q495Y8 402 aa15.11■□□□□ 0.01
TNFRSF1A-206ENST00000535038 PITPNM1O00562 1244 aa15□□□□□ -0.01
TNFRSF1A-206ENST00000535038 ZNF692Q9BU19 519 aaPredicted RBP14.95□□□□□ -0.02
TNFRSF1A-206ENST00000535038 PIP4P2Q8N4L2 257 aa14.91□□□□□ -0.02
TNFRSF1A-206ENST00000535038 SSUH2Q9Y2M2 353 aa14.9□□□□□ -0.02
TNFRSF1A-206ENST00000535038 FXR2P51116 673 aaKnown RBP eCLIP14.84□□□□□ -0.03
TNFRSF1A-206ENST00000535038 SPDYE1Q8NFV5 336 aaPredicted RBP14.82□□□□□ -0.04
TNFRSF1A-206ENST00000535038 CLEC11AQ9Y240 323 aa14.8□□□□□ -0.04
TNFRSF1A-206ENST00000535038 PABPN1Q86U42 306 aaKnown RBP eCLIP14.73□□□□□ -0.05
TNFRSF1A-206ENST00000535038 HAX1O00165 279 aa14.63□□□□□ -0.07
TNFRSF1A-206ENST00000535038 PRKAR2AP13861 404 aaKnown RBP14.63□□□□□ -0.07
TNFRSF1A-206ENST00000535038 SP7Q8TDD2 431 aaPredicted RBP14.6□□□□□ -0.07
TNFRSF1A-206ENST00000535038 PRR29P0C7W0 189 aa14.57□□□□□ -0.08
TNFRSF1A-206ENST00000535038 SPDYE4A6NLX3 237 aa14.5□□□□□ -0.09
TNFRSF1A-206ENST00000535038 CHADLQ6NUI6 762 aa14.49□□□□□ -0.09
TNFRSF1A-206ENST00000535038 EVX2Q03828 476 aa14.41□□□□□ -0.1
TNFRSF1A-206ENST00000535038 STAG3Q9UJ98 1225 aa14.37□□□□□ -0.11
TNFRSF1A-206ENST00000535038 C19orf67A6NJJ6 358 aa14.36□□□□□ -0.11
TNFRSF1A-206ENST00000535038 FARP1Q9Y4F1 1045 aaPredicted RBP14.28□□□□□ -0.12
TNFRSF1A-206ENST00000535038 CREBZFQ9NS37 354 aa14.2□□□□□ -0.14
TNFRSF1A-206ENST00000535038 CD44P16070 742 aaKnown RBP14.18□□□□□ -0.14
TNFRSF1A-206ENST00000535038 PROM2Q8N271 834 aa14.14□□□□□ -0.15
TNFRSF1A-206ENST00000535038 GABBR2O75899 941 aa14.12□□□□□ -0.15
TNFRSF1A-206ENST00000535038 ZRANB1Q9UGI0 708 aa13.99□□□□□ -0.17
TNFRSF1A-206ENST00000535038 NPM1P06748 294 aaKnown RBP eCLIP13.98□□□□□ -0.17
TNFRSF1A-206ENST00000535038 MNX1P50219 401 aaPredicted RBP13.97□□□□□ -0.17
TNFRSF1A-206ENST00000535038 CLCN6P51797 869 aa13.97□□□□□ -0.17
TNFRSF1A-206ENST00000535038 ZNF579Q8NAF0 562 aaKnown RBP13.95□□□□□ -0.18
TNFRSF1A-206ENST00000535038 PAK3O75914 559 aaPredicted RBP13.94□□□□□ -0.18
TNFRSF1A-206ENST00000535038 FKBP8Q14318 412 aa13.91□□□□□ -0.18
TNFRSF1A-206ENST00000535038 PLEKHG5O94827 1062 aa13.84□□□□□ -0.19
TNFRSF1A-206ENST00000535038 MIER1Q8N108 512 aa13.83□□□□□ -0.2
TNFRSF1A-206ENST00000535038 POTEIP0CG38 1075 aa13.8□□□□□ -0.2
TNFRSF1A-206ENST00000535038 PHF12Q96QT6 1004 aa13.8□□□□□ -0.2
TNFRSF1A-206ENST00000535038 DCBLD2Q96PD2 775 aa13.79□□□□□ -0.2
TNFRSF1A-206ENST00000535038 GALR2O43603 387 aaPredicted RBP13.77□□□□□ -0.21
TNFRSF1A-206ENST00000535038 PLCD3Q8N3E9 789 aa13.75□□□□□ -0.21
TNFRSF1A-206ENST00000535038 TSPYL2Q9H2G4 693 aaPredicted RBP13.73□□□□□ -0.21
TNFRSF1A-206ENST00000535038 LHX8Q68G74 356 aa13.7□□□□□ -0.22
TNFRSF1A-206ENST00000535038 ZBTB47Q9UFB7 747 aaPredicted RBP13.64□□□□□ -0.23
TNFRSF1A-206ENST00000535038 CCDC61Q9Y6R9 512 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 143.7 ms