RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 LRRD1A4D1F6 860 aa13.32□□□□□ -0.28
SCN3B-206ENST00000530277 ATF2P15336 505 aa13.32□□□□□ -0.28
SCN3B-206ENST00000530277 FXR2P51116 673 aaKnown RBP eCLIP13.32□□□□□ -0.28
SCN3B-206ENST00000530277 HMGCS2P54868 508 aa13.32□□□□□ -0.28
SCN3B-206ENST00000530277 MTMR2Q13614 643 aa13.32□□□□□ -0.28
SCN3B-206ENST00000530277 NPY5RQ15761 445 aa13.32□□□□□ -0.28
SCN3B-206ENST00000530277 GNPTABQ3T906 1256 aa13.32□□□□□ -0.28
SCN3B-206ENST00000530277 ARHGAP27Q6ZUM4 889 aa13.32□□□□□ -0.28
SCN3B-206ENST00000530277 ZNF354CQ86Y25 554 aa13.32□□□□□ -0.28
SCN3B-206ENST00000530277 ANKS1AQ92625 1134 aa13.32□□□□□ -0.28
SCN3B-206ENST00000530277 STMN4Q9H169 189 aaPredicted RBP13.32□□□□□ -0.28
SCN3B-206ENST00000530277 FAM208AQ9UK61 1670 aaKnown RBP13.32□□□□□ -0.28
SCN3B-206ENST00000530277 TMEM191BP0C7N4 346 aa13.32□□□□□ -0.28
SCN3B-206ENST00000530277 LACTBP83111 547 aaPredicted RBP13.32□□□□□ -0.28
SCN3B-206ENST00000530277 DGKZQ13574 1117 aa13.32□□□□□ -0.28
SCN3B-206ENST00000530277 FBXW10Q5XX13 1052 aa13.32□□□□□ -0.28
SCN3B-206ENST00000530277 SAMD7Q7Z3H4 446 aa13.32□□□□□ -0.28
SCN3B-206ENST00000530277 CCDC89Q8N998 374 aa13.32□□□□□ -0.28
SCN3B-206ENST00000530277 RNF146Q9NTX7 359 aa13.32□□□□□ -0.28
SCN3B-206ENST00000530277 FAM237AA0A1B0GTK4 181 aa13.31□□□□□ -0.28
SCN3B-206ENST00000530277 K7ERI5 159 aa13.31□□□□□ -0.28
SCN3B-206ENST00000530277 EML1O00423 815 aa13.31□□□□□ -0.28
SCN3B-206ENST00000530277 EYA4O95677 639 aa13.31□□□□□ -0.28
SCN3B-206ENST00000530277 FAM153BP0C7A2 387 aa13.31□□□□□ -0.28
SCN3B-206ENST00000530277 TRADDQ15628 312 aa13.31□□□□□ -0.28
SCN3B-206ENST00000530277 CDO1Q16878 200 aa13.31□□□□□ -0.28
SCN3B-206ENST00000530277 FAM153CQ494X1 144 aa13.31□□□□□ -0.28
SCN3B-206ENST00000530277 MDM1Q8TC05 714 aa13.31□□□□□ -0.28
SCN3B-206ENST00000530277 CPA5Q8WXQ8 436 aa13.31□□□□□ -0.28
SCN3B-206ENST00000530277 TMEM143Q96AN5 459 aa13.31□□□□□ -0.28
SCN3B-206ENST00000530277 CBWD1Q9BRT8 395 aa13.31□□□□□ -0.28
SCN3B-206ENST00000530277 MMTAG2Q9BU76 263 aaKnown RBP13.31□□□□□ -0.28
SCN3B-206ENST00000530277 CALN1Q9BXU9 219 aa13.31□□□□□ -0.28
SCN3B-206ENST00000530277 FAM153AQ9UHL3 310 aa13.31□□□□□ -0.28
SCN3B-206ENST00000530277 SGK1O00141 431 aa13.31□□□□□ -0.28
SCN3B-206ENST00000530277 ADRA2BP18089 450 aa13.31□□□□□ -0.28
SCN3B-206ENST00000530277 QARSP47897 775 aaKnown RBP13.31□□□□□ -0.28
SCN3B-206ENST00000530277 FMO5P49326 533 aa13.31□□□□□ -0.28
SCN3B-206ENST00000530277 TMED2Q15363 201 aa13.31□□□□□ -0.28
SCN3B-206ENST00000530277 HHATQ5VTY9 493 aa13.31□□□□□ -0.28
SCN3B-206ENST00000530277 RINT1Q6NUQ1 792 aa13.31□□□□□ -0.28
SCN3B-206ENST00000530277 PPP4R3CPQ6ZMV5 832 aa13.31□□□□□ -0.28
SCN3B-206ENST00000530277 ZNF571Q7Z3V5 609 aaPredicted RBP13.31□□□□□ -0.28
SCN3B-206ENST00000530277 SULF1Q8IWU6 871 aa13.31□□□□□ -0.28
SCN3B-206ENST00000530277 NEK9Q8TD19 979 aa13.31□□□□□ -0.28
SCN3B-206ENST00000530277 PBKQ96KB5 322 aa13.31□□□□□ -0.28
SCN3B-206ENST00000530277 CRAMP1Q96RY5 1269 aa13.31□□□□□ -0.28
SCN3B-206ENST00000530277 NUP85Q9BW27 656 aa13.31□□□□□ -0.28
SCN3B-206ENST00000530277 RIOX1Q9H6W3 641 aa13.31□□□□□ -0.28
SCN3B-206ENST00000530277 NAGPAQ9UK23 515 aa13.31□□□□□ -0.28
SCN3B-206ENST00000530277 RPA1P27694 616 aa13.31□□□□□ -0.28
SCN3B-206ENST00000530277 TNFAIP1Q13829 316 aa13.31□□□□□ -0.28
SCN3B-206ENST00000530277 BAATQ14032 418 aaPredicted RBP13.31□□□□□ -0.28
SCN3B-206ENST00000530277 RNF10Q8N5U6 811 aaKnown RBP13.31□□□□□ -0.28
SCN3B-206ENST00000530277 ACSF2Q96CM8 615 aaPredicted RBP13.31□□□□□ -0.28
SCN3B-206ENST00000530277 ZWILCHQ9H900 591 aa13.31□□□□□ -0.28
SCN3B-206ENST00000530277 FEZ2Q9UHY8 353 aaPredicted RBP13.31□□□□□ -0.28
SCN3B-206ENST00000530277 PASKQ96RG2 1323 aa13.31□□□□□ -0.28
SCN3B-206ENST00000530277 FOXN3O00409 490 aaPredicted RBP13.3□□□□□ -0.28
SCN3B-206ENST00000530277 ECEL1O95672 775 aa13.3□□□□□ -0.28
SCN3B-206ENST00000530277 EZRP15311 586 aaKnown RBP13.3□□□□□ -0.28
SCN3B-206ENST00000530277 SOX5P35711 763 aa13.3□□□□□ -0.28
SCN3B-206ENST00000530277 KLHDC7AQ5VTJ3 777 aa13.3□□□□□ -0.28
SCN3B-206ENST00000530277 TNFRSF25Q93038 417 aa13.3□□□□□ -0.28
SCN3B-206ENST00000530277 PURBQ96QR8 312 aaKnown RBP13.3□□□□□ -0.28
SCN3B-206ENST00000530277 IWS1Q96ST2 819 aa13.3□□□□□ -0.28
SCN3B-206ENST00000530277 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.3□□□□□ -0.28
SCN3B-206ENST00000530277 THAP2Q9H0W7 228 aa13.3□□□□□ -0.28
SCN3B-206ENST00000530277 TAF1DQ9H5J8 278 aaPredicted RBP13.3□□□□□ -0.28
SCN3B-206ENST00000530277 LCMT1Q9UIC8 334 aa13.3□□□□□ -0.28
SCN3B-206ENST00000530277 CACNA1FO60840 1977 aa13.3□□□□□ -0.28
SCN3B-206ENST00000530277 ACTN3Q08043 901 aaPredicted RBP13.3□□□□□ -0.28
SCN3B-206ENST00000530277 BFSP1Q12934 665 aa13.3□□□□□ -0.28
SCN3B-206ENST00000530277 C7orf31Q8N865 590 aa13.3□□□□□ -0.28
SCN3B-206ENST00000530277 PHF20L1A8MW92 1017 aa13.3□□□□□ -0.28
SCN3B-206ENST00000530277 RASGRF2O14827 1237 aa13.3□□□□□ -0.28
SCN3B-206ENST00000530277 PON1P27169 355 aa13.3□□□□□ -0.28
SCN3B-206ENST00000530277 IRAK1P51617 712 aa13.3□□□□□ -0.28
SCN3B-206ENST00000530277 GIT2Q14161 759 aa13.3□□□□□ -0.28
SCN3B-206ENST00000530277 CIAPIN1Q6FI81 312 aa13.3□□□□□ -0.28
SCN3B-206ENST00000530277 RNF169Q8NCN4 708 aa13.3□□□□□ -0.28
SCN3B-206ENST00000530277 HAS1Q92839 578 aa13.3□□□□□ -0.28
SCN3B-206ENST00000530277 ATP6V0A1Q93050 837 aa13.3□□□□□ -0.28
SCN3B-206ENST00000530277 VTI1AQ96AJ9 217 aa13.3□□□□□ -0.28
SCN3B-206ENST00000530277 PCSK1NQ9UHG2 260 aa13.3□□□□□ -0.28
SCN3B-206ENST00000530277 NFIBO00712 420 aa13.3□□□□□ -0.28
SCN3B-206ENST00000530277 PDXKO00764 312 aa13.3□□□□□ -0.28
SCN3B-206ENST00000530277 ZRANB2O95218 330 aaKnown RBP eCLIP13.3□□□□□ -0.28
SCN3B-206ENST00000530277 SESN3P58005 492 aa13.3□□□□□ -0.28
SCN3B-206ENST00000530277 HIBCHQ6NVY1 386 aaPredicted RBP13.3□□□□□ -0.28
SCN3B-206ENST00000530277 TAOK1Q7L7X3 1001 aa13.3□□□□□ -0.28
SCN3B-206ENST00000530277 WHAMMQ8TF30 809 aa13.3□□□□□ -0.28
SCN3B-206ENST00000530277 JPH2Q9BR39 696 aaPredicted RBP13.3□□□□□ -0.28
SCN3B-206ENST00000530277 TMEM206Q9H813 350 aa13.3□□□□□ -0.28
SCN3B-206ENST00000530277 RAB20Q9NX57 234 aa13.3□□□□□ -0.28
SCN3B-206ENST00000530277 XRN1Q8IZH2 1706 aaKnown RBP13.29□□□□□ -0.28
SCN3B-206ENST00000530277 CLDN3O15551 220 aa13.29□□□□□ -0.28
SCN3B-206ENST00000530277 SETDB1Q15047 1291 aa13.29□□□□□ -0.28
SCN3B-206ENST00000530277 ALS2CLQ60I27 953 aa13.29□□□□□ -0.28
SCN3B-206ENST00000530277 NUGGCQ68CJ6 796 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms