RNA–Protein interactions for RNA: ENST00000528729.1

FDFT1-213, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 3

Gene FDFT1, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-213ENST00000528729 NCOA1Q15788 1441 aa8.05□□□□□ -1.12
FDFT1-213ENST00000528729 PREX2Q70Z35 1606 aa8.05□□□□□ -1.12
FDFT1-213ENST00000528729 PI4KAP2A4QPH2 592 aa8.05□□□□□ -1.12
FDFT1-213ENST00000528729 PI4K2BG5E9Z4 385 aa8.05□□□□□ -1.12
FDFT1-213ENST00000528729 HAX1O00165 279 aa8.05□□□□□ -1.12
FDFT1-213ENST00000528729 DDX3XO00571 662 aaKnown RBP eCLIP8.05□□□□□ -1.12
FDFT1-213ENST00000528729 B3GALNT1O75752 331 aa8.05□□□□□ -1.12
FDFT1-213ENST00000528729 GSNP06396 782 aa8.05□□□□□ -1.12
FDFT1-213ENST00000528729 EFR3AQ14156 821 aa8.05□□□□□ -1.12
FDFT1-213ENST00000528729 BECN1Q14457 450 aa8.05□□□□□ -1.12
FDFT1-213ENST00000528729 SMAD2Q15796 467 aaKnown RBP8.05□□□□□ -1.12
FDFT1-213ENST00000528729 PRSS53Q2L4Q9 553 aa8.05□□□□□ -1.12
FDFT1-213ENST00000528729 ARL13BQ3SXY8 428 aa8.05□□□□□ -1.12
FDFT1-213ENST00000528729 WDR44Q5JSH3 913 aa8.05□□□□□ -1.12
FDFT1-213ENST00000528729 VARS2Q5ST30 1063 aaKnown RBP8.05□□□□□ -1.12
FDFT1-213ENST00000528729 HAUS3Q68CZ6 603 aa8.05□□□□□ -1.12
FDFT1-213ENST00000528729 RPUSD3Q6P087 351 aaKnown RBP8.05□□□□□ -1.12
FDFT1-213ENST00000528729 LBX2Q6XYB7 198 aa8.05□□□□□ -1.12
FDFT1-213ENST00000528729 BTN2A1Q7KYR7 527 aa8.05□□□□□ -1.12
FDFT1-213ENST00000528729 VN1R5Q7Z5H4 357 aa8.05□□□□□ -1.12
FDFT1-213ENST00000528729 EPHX4Q8IUS5 362 aa8.05□□□□□ -1.12
FDFT1-213ENST00000528729 CPOQ8IVL8 374 aa8.05□□□□□ -1.12
FDFT1-213ENST00000528729 ZNF687Q8N1G0 1237 aa8.05□□□□□ -1.12
FDFT1-213ENST00000528729 RNF152Q8N8N0 203 aa8.05□□□□□ -1.12
FDFT1-213ENST00000528729 NAT8LQ8N9F0 302 aa8.05□□□□□ -1.12
FDFT1-213ENST00000528729 PCDH19Q8TAB3 1148 aa8.05□□□□□ -1.12
FDFT1-213ENST00000528729 TGFBRAP1Q8WUH2 860 aa8.05□□□□□ -1.12
FDFT1-213ENST00000528729 COA7Q96BR5 231 aa8.05□□□□□ -1.12
FDFT1-213ENST00000528729 GAS2L1Q99501 681 aaPredicted RBP8.05□□□□□ -1.12
FDFT1-213ENST00000528729 DESI2Q9BSY9 194 aa8.05□□□□□ -1.12
FDFT1-213ENST00000528729 C22orf23Q9BZE7 217 aa8.05□□□□□ -1.12
FDFT1-213ENST00000528729 UNKQ9C0B0 810 aaKnown RBP8.05□□□□□ -1.12
FDFT1-213ENST00000528729 PNPLA8Q9NP80 782 aa8.05□□□□□ -1.12
FDFT1-213ENST00000528729 HAUS2Q9NVX0 235 aa8.05□□□□□ -1.12
FDFT1-213ENST00000528729 BLOC1S6Q9UL45 172 aa8.05□□□□□ -1.12
FDFT1-213ENST00000528729 HDAC5Q9UQL6 1122 aa8.05□□□□□ -1.12
FDFT1-213ENST00000528729 CEP83Q9Y592 693 aa8.05□□□□□ -1.12
FDFT1-213ENST00000528729 PTPRKQ15262 1439 aa8.04□□□□□ -1.12
FDFT1-213ENST00000528729 SIGLEC1Q9BZZ2 1709 aa8.04□□□□□ -1.12
FDFT1-213ENST00000528729 A0A1B0GTH6 734 aa8.04□□□□□ -1.12
FDFT1-213ENST00000528729 FIGNL2A6NMB9 653 aa8.04□□□□□ -1.12
FDFT1-213ENST00000528729 GOLGA6L22H0YM25 854 aa8.04□□□□□ -1.12
FDFT1-213ENST00000528729 ADRB2P07550 413 aa8.04□□□□□ -1.12
FDFT1-213ENST00000528729 ITGA4P13612 1032 aa8.04□□□□□ -1.12
FDFT1-213ENST00000528729 ALOX15P16050 662 aaPredicted RBP8.04□□□□□ -1.12
FDFT1-213ENST00000528729 NFKB1P19838 968 aa8.04□□□□□ -1.12
FDFT1-213ENST00000528729 ALAS2P22557 587 aa8.04□□□□□ -1.12
FDFT1-213ENST00000528729 MSX1P28360 303 aa8.04□□□□□ -1.12
FDFT1-213ENST00000528729 CASQ1P31415 396 aa8.04□□□□□ -1.12
FDFT1-213ENST00000528729 GRK4P32298 578 aa8.04□□□□□ -1.12
FDFT1-213ENST00000528729 HOXD13P35453 343 aa8.04□□□□□ -1.12
FDFT1-213ENST00000528729 ACTN2P35609 894 aa8.04□□□□□ -1.12
FDFT1-213ENST00000528729 SERPINF1P36955 418 aa8.04□□□□□ -1.12
FDFT1-213ENST00000528729 ECI1P42126 302 aa8.04□□□□□ -1.12
FDFT1-213ENST00000528729 RNASE9P60153 205 aaKnown RBP8.04□□□□□ -1.12
FDFT1-213ENST00000528729 VAMP2P63027 116 aa8.04□□□□□ -1.12
FDFT1-213ENST00000528729 SMAD3P84022 425 aaKnown RBP8.04□□□□□ -1.12
FDFT1-213ENST00000528729 SRSF2Q01130 221 aaKnown RBP8.04□□□□□ -1.12
FDFT1-213ENST00000528729 CALD1Q05682 793 aaKnown RBP8.04□□□□□ -1.12
FDFT1-213ENST00000528729 MAPK7Q13164 816 aa8.04□□□□□ -1.12
FDFT1-213ENST00000528729 MOGSQ13724 837 aa8.04□□□□□ -1.12
FDFT1-213ENST00000528729 ERV3-1Q14264 604 aa8.04□□□□□ -1.12
FDFT1-213ENST00000528729 ASIC2Q16515 512 aa8.04□□□□□ -1.12
FDFT1-213ENST00000528729 SLC35G1Q2M3R5 365 aa8.04□□□□□ -1.12
FDFT1-213ENST00000528729 OTOP1Q7RTM1 612 aa8.04□□□□□ -1.12
FDFT1-213ENST00000528729 LIX1LQ8IVB5 337 aa8.04□□□□□ -1.12
FDFT1-213ENST00000528729 TRMT2AQ8IZ69 625 aaKnown RBP8.04□□□□□ -1.12
FDFT1-213ENST00000528729 CCDC33Q8N5R6 958 aa8.04□□□□□ -1.12
FDFT1-213ENST00000528729 ADCY4Q8NFM4 1077 aa8.04□□□□□ -1.12
FDFT1-213ENST00000528729 OR10H5Q8NGA6 315 aa8.04□□□□□ -1.12
FDFT1-213ENST00000528729 LILRB1Q8NHL6 650 aaPredicted RBP8.04□□□□□ -1.12
FDFT1-213ENST00000528729 SPPL3Q8TCT6 385 aa8.04□□□□□ -1.12
FDFT1-213ENST00000528729 ZNF516Q92618 1163 aa8.04□□□□□ -1.12
FDFT1-213ENST00000528729 POP1Q99575 1024 aaKnown RBP8.04□□□□□ -1.12
FDFT1-213ENST00000528729 GPATCH1Q9BRR8 931 aaKnown RBP8.04□□□□□ -1.12
FDFT1-213ENST00000528729 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.04□□□□□ -1.12
FDFT1-213ENST00000528729 GRPEL1Q9HAV7 217 aa8.04□□□□□ -1.12
FDFT1-213ENST00000528729 PICK1Q9NRD5 415 aa8.04□□□□□ -1.12
FDFT1-213ENST00000528729 SOX13Q9UN79 622 aa8.04□□□□□ -1.12
FDFT1-213ENST00000528729 ATP6V0A2Q9Y487 856 aa8.04□□□□□ -1.12
FDFT1-213ENST00000528729 SPO11Q9Y5K1 396 aa8.04□□□□□ -1.12
FDFT1-213ENST00000528729 FER1L4A9Z1Z3 1794 aa8.04□□□□□ -1.12
FDFT1-213ENST00000528729 SYCP2Q9BX26 1530 aa8.03□□□□□ -1.12
FDFT1-213ENST00000528729 KIDINS220Q9ULH0 1771 aa8.03□□□□□ -1.12
FDFT1-213ENST00000528729 CCDC196A0A1B0GTZ2 297 aa8.03□□□□□ -1.12
FDFT1-213ENST00000528729 LGALS16A8MUM7 142 aa8.03□□□□□ -1.12
FDFT1-213ENST00000528729 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.03□□□□□ -1.12
FDFT1-213ENST00000528729 IPO5O00410 1097 aaKnown RBP8.03□□□□□ -1.12
FDFT1-213ENST00000528729 APOL1O14791 398 aa8.03□□□□□ -1.12
FDFT1-213ENST00000528729 NPC1O15118 1278 aa8.03□□□□□ -1.12
FDFT1-213ENST00000528729 COBLO75128 1261 aa8.03□□□□□ -1.12
FDFT1-213ENST00000528729 RTN3O95197 1032 aaPredicted RBP8.03□□□□□ -1.12
FDFT1-213ENST00000528729 ALDH1A1P00352 501 aa8.03□□□□□ -1.12
FDFT1-213ENST00000528729 ESRRAP11474 423 aaPredicted RBP8.03□□□□□ -1.12
FDFT1-213ENST00000528729 HARSP12081 509 aaKnown RBP8.03□□□□□ -1.12
FDFT1-213ENST00000528729 P4HA1P13674 534 aa8.03□□□□□ -1.12
FDFT1-213ENST00000528729 TNNT2P45379 298 aaPredicted RBP8.03□□□□□ -1.12
FDFT1-213ENST00000528729 UBXN2AP68543 259 aa8.03□□□□□ -1.12
FDFT1-213ENST00000528729 PAK1Q13153 545 aa8.03□□□□□ -1.12
FDFT1-213ENST00000528729 DAG1Q14118 895 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms