RNA–Protein interactions for RNA: ENST00000517709.1

MCM4-202, Transcript of minichromosome maintenance complex component 4, humanhuman

TSL 2

Gene MCM4, Length 842 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM4-202ENST00000517709 PCDHA12Q9UN75 941 aa13.25□□□□□ -0.29
MCM4-202ENST00000517709 PCDHB6Q9Y5E3 794 aa13.25□□□□□ -0.29
MCM4-202ENST00000517709 PLXNA3P51805 1871 aa13.25□□□□□ -0.29
MCM4-202ENST00000517709 B4GALT3O60512 393 aa13.24□□□□□ -0.29
MCM4-202ENST00000517709 LYPLA2O95372 231 aa13.24□□□□□ -0.29
MCM4-202ENST00000517709 BAG4O95429 457 aaKnown RBP13.24□□□□□ -0.29
MCM4-202ENST00000517709 STAG3L1P0CL83 205 aa13.24□□□□□ -0.29
MCM4-202ENST00000517709 BMP1P13497 986 aa13.24□□□□□ -0.29
MCM4-202ENST00000517709 U2AF2P26368 475 aaKnown RBP eCLIP13.24□□□□□ -0.29
MCM4-202ENST00000517709 TECP42680 631 aa13.24□□□□□ -0.29
MCM4-202ENST00000517709 RARRES1P49788 294 aa13.24□□□□□ -0.29
MCM4-202ENST00000517709 MRPS5P82675 430 aaKnown RBP13.24□□□□□ -0.29
MCM4-202ENST00000517709 LAMTOR4Q0VGL1 99 aa13.24□□□□□ -0.29
MCM4-202ENST00000517709 SAFBQ15424 915 aaKnown RBP eCLIP13.24□□□□□ -0.29
MCM4-202ENST00000517709 IL17AQ16552 155 aa13.24□□□□□ -0.29
MCM4-202ENST00000517709 LONRF3Q496Y0 759 aa13.24□□□□□ -0.29
MCM4-202ENST00000517709 ZNF410Q86VK4 478 aa13.24□□□□□ -0.29
MCM4-202ENST00000517709 FAM184AQ8NB25 1140 aa13.24□□□□□ -0.29
MCM4-202ENST00000517709 RNF169Q8NCN4 708 aa13.24□□□□□ -0.29
MCM4-202ENST00000517709 PRPF31Q8WWY3 499 aaKnown RBP13.24□□□□□ -0.29
MCM4-202ENST00000517709 C11orf84Q9BUA3 381 aaPredicted RBP13.24□□□□□ -0.29
MCM4-202ENST00000517709 UBE2ZQ9H832 354 aaPredicted RBP13.24□□□□□ -0.29
MCM4-202ENST00000517709 GPRC5CQ9NQ84 441 aa13.24□□□□□ -0.29
MCM4-202ENST00000517709 PLAGL2Q9UPG8 496 aa13.24□□□□□ -0.29
MCM4-202ENST00000517709 PIN4Q9Y237 131 aaKnown RBP13.24□□□□□ -0.29
MCM4-202ENST00000517709 PCDHB7Q9Y5E2 793 aa13.24□□□□□ -0.29
MCM4-202ENST00000517709 PDCD11Q14690 1871 aaKnown RBP13.24□□□□□ -0.29
MCM4-202ENST00000517709 TRIOO75962 3097 aa13.24□□□□□ -0.29
MCM4-202ENST00000517709 PP2D1A8MPX8 630 aa13.23□□□□□ -0.29
MCM4-202ENST00000517709 LINC01565O15544 149 aa13.23□□□□□ -0.29
MCM4-202ENST00000517709 ST18O60284 1047 aa13.23□□□□□ -0.29
MCM4-202ENST00000517709 USO1O60763 962 aaKnown RBP13.23□□□□□ -0.29
MCM4-202ENST00000517709 GJB2P29033 226 aa13.23□□□□□ -0.29
MCM4-202ENST00000517709 RFC5P40937 340 aa13.23□□□□□ -0.29
MCM4-202ENST00000517709 HYAL1Q12794 435 aa13.23□□□□□ -0.29
MCM4-202ENST00000517709 CAPSQ13938 189 aa13.23□□□□□ -0.29
MCM4-202ENST00000517709 COL19A1Q14993 1142 aa13.23□□□□□ -0.29
MCM4-202ENST00000517709 TIGD5Q53EQ6 642 aa13.23□□□□□ -0.29
MCM4-202ENST00000517709 FERMT3Q86UX7 667 aa13.23□□□□□ -0.29
MCM4-202ENST00000517709 CATSPER3Q86XQ3 398 aa13.23□□□□□ -0.29
MCM4-202ENST00000517709 COLGALT1Q8NBJ5 622 aa13.23□□□□□ -0.29
MCM4-202ENST00000517709 SPPL3Q8TCT6 385 aa13.23□□□□□ -0.29
MCM4-202ENST00000517709 HELQQ8TDG4 1101 aa13.23□□□□□ -0.29
MCM4-202ENST00000517709 SLC7A3Q8WY07 619 aa13.23□□□□□ -0.29
MCM4-202ENST00000517709 MTRQ99707 1265 aa13.23□□□□□ -0.29
MCM4-202ENST00000517709 GCOM2Q9BZD3 368 aaPredicted RBP13.23□□□□□ -0.29
MCM4-202ENST00000517709 NSUN3Q9H649 340 aaKnown RBP13.23□□□□□ -0.29
MCM4-202ENST00000517709 AGPAT5Q9NUQ2 364 aa13.23□□□□□ -0.29
MCM4-202ENST00000517709 TYW1Q9NV66 732 aaKnown RBP13.23□□□□□ -0.29
MCM4-202ENST00000517709 BDP1A6H8Y1 2624 aa13.23□□□□□ -0.29
MCM4-202ENST00000517709 H3BQ06 376 aaPredicted RBP13.22□□□□□ -0.29
MCM4-202ENST00000517709 TBX10O75333 385 aa13.22□□□□□ -0.29
MCM4-202ENST00000517709 EDN1P05305 212 aa13.22□□□□□ -0.29
MCM4-202ENST00000517709 SRGAP2CP0DJJ0 459 aa13.22□□□□□ -0.29
MCM4-202ENST00000517709 GLRA2P23416 452 aa13.22□□□□□ -0.29
MCM4-202ENST00000517709 LTBRP36941 435 aa13.22□□□□□ -0.29
MCM4-202ENST00000517709 PHKA2P46019 1235 aa13.22□□□□□ -0.29
MCM4-202ENST00000517709 AFF1P51825 1210 aaKnown RBP13.22□□□□□ -0.29
MCM4-202ENST00000517709 RBM10P98175 930 aaKnown RBP13.22□□□□□ -0.29
MCM4-202ENST00000517709 DLX2Q07687 328 aaPredicted RBP13.22□□□□□ -0.29
MCM4-202ENST00000517709 UBXN11Q5T124 520 aa13.22□□□□□ -0.29
MCM4-202ENST00000517709 TMEM173Q86WV6 379 aaPredicted RBP13.22□□□□□ -0.29
MCM4-202ENST00000517709 RNF149Q8NC42 400 aa13.22□□□□□ -0.29
MCM4-202ENST00000517709 NEK9Q8TD19 979 aa13.22□□□□□ -0.29
MCM4-202ENST00000517709 PSPC1Q8WXF1 523 aaKnown RBP13.22□□□□□ -0.29
MCM4-202ENST00000517709 BSNDQ8WZ55 320 aa13.22□□□□□ -0.29
MCM4-202ENST00000517709 HLA-CQ95604 372 aa13.22□□□□□ -0.29
MCM4-202ENST00000517709 ELAC1Q9H777 363 aaKnown RBP13.22□□□□□ -0.29
MCM4-202ENST00000517709 ATP6V0A4Q9HBG4 840 aa13.22□□□□□ -0.29
MCM4-202ENST00000517709 DENND4AQ7Z401 1863 aa13.21□□□□□ -0.29
MCM4-202ENST00000517709 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.21□□□□□ -0.29
MCM4-202ENST00000517709 A0A0U1RQF3 1178 aa13.21□□□□□ -0.29
MCM4-202ENST00000517709 DKC1O60832 514 aaKnown RBP eCLIP13.21□□□□□ -0.29
MCM4-202ENST00000517709 RB1P06400 928 aa13.21□□□□□ -0.29
MCM4-202ENST00000517709 IL9P15248 144 aa13.21□□□□□ -0.29
MCM4-202ENST00000517709 KCNA5P22460 613 aa13.21□□□□□ -0.29
MCM4-202ENST00000517709 SFPQP23246 707 aaKnown RBP eCLIP13.21□□□□□ -0.29
MCM4-202ENST00000517709 HOXA11P31270 313 aaPredicted RBP13.21□□□□□ -0.29
MCM4-202ENST00000517709 ARL2P36404 184 aa13.21□□□□□ -0.29
MCM4-202ENST00000517709 DNM2P50570 870 aa13.21□□□□□ -0.29
MCM4-202ENST00000517709 AMHR2Q16671 573 aa13.21□□□□□ -0.29
MCM4-202ENST00000517709 PTPROQ16827 1216 aa13.21□□□□□ -0.29
MCM4-202ENST00000517709 ODR4Q5SWX8 454 aa13.21□□□□□ -0.29
MCM4-202ENST00000517709 MAEAQ7L5Y9 396 aa13.21□□□□□ -0.29
MCM4-202ENST00000517709 CATSPER4Q7RTX7 472 aa13.21□□□□□ -0.29
MCM4-202ENST00000517709 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.21□□□□□ -0.29
MCM4-202ENST00000517709 BCL7CQ8WUZ0 217 aaPredicted RBP13.21□□□□□ -0.29
MCM4-202ENST00000517709 POF1BQ8WVV4 589 aa13.21□□□□□ -0.29
MCM4-202ENST00000517709 P2RX5Q93086 422 aa13.21□□□□□ -0.29
MCM4-202ENST00000517709 CPB2Q96IY4 423 aa13.21□□□□□ -0.29
MCM4-202ENST00000517709 UHRF1Q96T88 793 aaPredicted RBP13.21□□□□□ -0.29
MCM4-202ENST00000517709 PLVAPQ9BX97 442 aa13.21□□□□□ -0.29
MCM4-202ENST00000517709 TMEM117Q9H0C3 514 aa13.21□□□□□ -0.29
MCM4-202ENST00000517709 POLR3FQ9H1D9 316 aaPredicted RBP13.21□□□□□ -0.29
MCM4-202ENST00000517709 ANKEF1Q9NU02 776 aa13.21□□□□□ -0.29
MCM4-202ENST00000517709 FAM105AQ9NUU6 356 aa13.21□□□□□ -0.29
MCM4-202ENST00000517709 RWDD3Q9Y3V2 267 aa13.21□□□□□ -0.29
MCM4-202ENST00000517709 C2orf16Q68DN1 1984 aa13.21□□□□□ -0.29
MCM4-202ENST00000517709 VWA8A3KMH1 1905 aa13.2□□□□□ -0.3
MCM4-202ENST00000517709 TTLL13PA6NNM8 815 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms