RNA–Protein interactions for RNA: ENST00000513326.5

HTT-211, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 373 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-211ENST00000513326 GFRA2O00451 464 aa5.78□□□□□ -1.48
HTT-211ENST00000513326 DCXO43602 365 aa5.78□□□□□ -1.48
HTT-211ENST00000513326 IDH1O75874 414 aaKnown RBP5.78□□□□□ -1.48
HTT-211ENST00000513326 WISP1O95388 367 aa5.78□□□□□ -1.48
HTT-211ENST00000513326 SLC25A27O95847 323 aa5.78□□□□□ -1.48
HTT-211ENST00000513326 CHGBP05060 677 aa5.78□□□□□ -1.48
HTT-211ENST00000513326 SSBP05455 408 aaKnown RBP eCLIP5.78□□□□□ -1.48
HTT-211ENST00000513326 SPATA31C1P0DKV0 1188 aa5.78□□□□□ -1.48
HTT-211ENST00000513326 PTPRZ1P23471 2315 aaPredicted RBP5.78□□□□□ -1.48
HTT-211ENST00000513326 DEFB103AP81534 67 aa5.78□□□□□ -1.48
HTT-211ENST00000513326 CNTN2Q02246 1040 aa5.78□□□□□ -1.48
HTT-211ENST00000513326 ICA1Q05084 483 aa5.78□□□□□ -1.48
HTT-211ENST00000513326 ZP2Q05996 745 aa5.78□□□□□ -1.48
HTT-211ENST00000513326 INPP5AQ14642 412 aa5.78□□□□□ -1.48
HTT-211ENST00000513326 GPNMBQ14956 572 aa5.78□□□□□ -1.48
HTT-211ENST00000513326 ZC3H12AQ5D1E8 599 aaKnown RBP5.78□□□□□ -1.48
HTT-211ENST00000513326 WIPI1Q5MNZ9 446 aaPredicted RBP5.78□□□□□ -1.48
HTT-211ENST00000513326 TTC39AQ5SRH9 613 aa5.78□□□□□ -1.48
HTT-211ENST00000513326 LRFN4Q6PJG9 635 aa5.78□□□□□ -1.48
HTT-211ENST00000513326 ATF7IPQ6VMQ6 1270 aa5.78□□□□□ -1.48
HTT-211ENST00000513326 ACAD11Q709F0 780 aa5.78□□□□□ -1.48
HTT-211ENST00000513326 CCDC144CPQ8IYA2 1237 aa5.78□□□□□ -1.48
HTT-211ENST00000513326 TMEM130Q8N3G9 435 aa5.78□□□□□ -1.48
HTT-211ENST00000513326 PCSK9Q8NBP7 692 aaKnown RBP5.78□□□□□ -1.48
HTT-211ENST00000513326 SDR42E1Q8WUS8 393 aa5.78□□□□□ -1.48
HTT-211ENST00000513326 ELMO3Q96BJ8 720 aa5.78□□□□□ -1.48
HTT-211ENST00000513326 PLPPR2Q96GM1 343 aa5.78□□□□□ -1.48
HTT-211ENST00000513326 ALDH8A1Q9H2A2 487 aaPredicted RBP5.78□□□□□ -1.48
HTT-211ENST00000513326 CYP4F12Q9HCS2 524 aa5.78□□□□□ -1.48
HTT-211ENST00000513326 BRMS1Q9HCU9 246 aa5.78□□□□□ -1.48
HTT-211ENST00000513326 PDGFCQ9NRA1 345 aa5.78□□□□□ -1.48
HTT-211ENST00000513326 MUTYHQ9UIF7 546 aa5.78□□□□□ -1.48
HTT-211ENST00000513326 DBNLQ9UJU6 430 aaKnown RBP5.78□□□□□ -1.48
HTT-211ENST00000513326 PPP1R9AQ9ULJ8 1098 aa5.78□□□□□ -1.48
HTT-211ENST00000513326 TMX2Q9Y320 296 aa5.78□□□□□ -1.48
HTT-211ENST00000513326 COL4A6Q14031 1691 aa5.78□□□□□ -1.48
HTT-211ENST00000513326 DCHS1Q96JQ0 3298 aa5.77□□□□□ -1.49
HTT-211ENST00000513326 PLXNA3P51805 1871 aa5.77□□□□□ -1.49
HTT-211ENST00000513326 KMT2EQ8IZD2 1858 aa5.77□□□□□ -1.49
HTT-211ENST00000513326 C5orf42Q9H799 3197 aa5.77□□□□□ -1.49
HTT-211ENST00000513326 WDR46O15213 610 aaKnown RBP5.77□□□□□ -1.49
HTT-211ENST00000513326 PRKAB2O43741 272 aa5.77□□□□□ -1.49
HTT-211ENST00000513326 UQCRFS1P1P0C7P4 283 aa5.77□□□□□ -1.49
HTT-211ENST00000513326 EEF2P13639 858 aaKnown RBP5.77□□□□□ -1.49
HTT-211ENST00000513326 SELPP16109 830 aa5.77□□□□□ -1.49
HTT-211ENST00000513326 GTF2F1P35269 517 aaKnown RBP eCLIP5.77□□□□□ -1.49
HTT-211ENST00000513326 NKX3-2P78367 333 aa5.77□□□□□ -1.49
HTT-211ENST00000513326 ID3Q02535 119 aa5.77□□□□□ -1.49
HTT-211ENST00000513326 MTX1Q13505 466 aa5.77□□□□□ -1.49
HTT-211ENST00000513326 FSCN1Q16658 493 aaKnown RBP5.77□□□□□ -1.49
HTT-211ENST00000513326 TNNI3KQ59H18 835 aa5.77□□□□□ -1.49
HTT-211ENST00000513326 SNRNP48Q6IEG0 339 aaKnown RBP5.77□□□□□ -1.49
HTT-211ENST00000513326 CYFIP1Q7L576 1253 aa5.77□□□□□ -1.49
HTT-211ENST00000513326 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.77□□□□□ -1.49
HTT-211ENST00000513326 TLK2Q86UE8 772 aa5.77□□□□□ -1.49
HTT-211ENST00000513326 SMG8Q8ND04 991 aaKnown RBP5.77□□□□□ -1.49
HTT-211ENST00000513326 CPLX3Q8WVH0 158 aa5.77□□□□□ -1.49
HTT-211ENST00000513326 EHMT1Q9H9B1 1298 aa5.77□□□□□ -1.49
HTT-211ENST00000513326 RAVER2Q9HCJ3 691 aaKnown RBP5.77□□□□□ -1.49
HTT-211ENST00000513326 NOB1Q9ULX3 412 aaKnown RBP5.77□□□□□ -1.49
HTT-211ENST00000513326 PCDHGC5Q9Y5F6 944 aa5.77□□□□□ -1.49
HTT-211ENST00000513326 FPGT-TNNI3KV9GXZ4 949 aa5.77□□□□□ -1.49
HTT-211ENST00000513326 LCTP09848 1927 aa5.77□□□□□ -1.49
HTT-211ENST00000513326 ATG2AQ2TAZ0 1938 aa5.77□□□□□ -1.49
HTT-211ENST00000513326 ZNF536O15090 1300 aa5.76□□□□□ -1.49
HTT-211ENST00000513326 TNKSO95271 1327 aa5.76□□□□□ -1.49
HTT-211ENST00000513326 SIP14410 1827 aa5.76□□□□□ -1.49
HTT-211ENST00000513326 CACNA1BQ00975 2339 aa5.76□□□□□ -1.49
HTT-211ENST00000513326 MYH8P13535 1937 aa5.76□□□□□ -1.49
HTT-211ENST00000513326 BAZ2AQ9UIF9 1905 aaKnown RBP5.76□□□□□ -1.49
HTT-211ENST00000513326 LINC01553A4QN01 128 aa5.76□□□□□ -1.49
HTT-211ENST00000513326 DYNC1LI2O43237 492 aaPredicted RBP5.76□□□□□ -1.49
HTT-211ENST00000513326 ATE1O95260 518 aa5.76□□□□□ -1.49
HTT-211ENST00000513326 IMPDH2P12268 514 aa5.76□□□□□ -1.49
HTT-211ENST00000513326 ALADP13716 330 aa5.76□□□□□ -1.49
HTT-211ENST00000513326 CDK8P49336 464 aa5.76□□□□□ -1.49
HTT-211ENST00000513326 VCPP55072 806 aaKnown RBP5.76□□□□□ -1.49
HTT-211ENST00000513326 WDR5P61964 334 aaKnown RBP5.76□□□□□ -1.49
HTT-211ENST00000513326 TNFAIP2Q03169 654 aa5.76□□□□□ -1.49
HTT-211ENST00000513326 CLUL1Q15846 466 aa5.76□□□□□ -1.49
HTT-211ENST00000513326 GRIK4Q16099 956 aa5.76□□□□□ -1.49
HTT-211ENST00000513326 GK5Q6ZS86 529 aa5.76□□□□□ -1.49
HTT-211ENST00000513326 TMEM179Q6ZVK1 233 aa5.76□□□□□ -1.49
HTT-211ENST00000513326 NOL8Q76FK4 1167 aaKnown RBP5.76□□□□□ -1.49
HTT-211ENST00000513326 EEPD1Q7L9B9 569 aa5.76□□□□□ -1.49
HTT-211ENST00000513326 TTC6Q86TZ1 520 aa5.76□□□□□ -1.49
HTT-211ENST00000513326 FBXO16Q8IX29 292 aaPredicted RBP5.76□□□□□ -1.49
HTT-211ENST00000513326 RPUSD2Q8IZ73 545 aaKnown RBP5.76□□□□□ -1.49
HTT-211ENST00000513326 CPXCR1Q8N123 301 aa5.76□□□□□ -1.49
HTT-211ENST00000513326 LCORLQ8N3X6 602 aa5.76□□□□□ -1.49
HTT-211ENST00000513326 MSL3Q8N5Y2 521 aaKnown RBP5.76□□□□□ -1.49
HTT-211ENST00000513326 NEK9Q8TD19 979 aa5.76□□□□□ -1.49
HTT-211ENST00000513326 DHX38Q92620 1227 aaKnown RBP5.76□□□□□ -1.49
HTT-211ENST00000513326 DDX11Q96FC9 970 aa5.76□□□□□ -1.49
HTT-211ENST00000513326 NACC1Q96RE7 527 aa5.76□□□□□ -1.49
HTT-211ENST00000513326 FERD3LQ96RJ6 166 aa5.76□□□□□ -1.49
HTT-211ENST00000513326 SLC9A7Q96T83 725 aa5.76□□□□□ -1.49
HTT-211ENST00000513326 C17orf80Q9BSJ5 609 aa5.76□□□□□ -1.49
HTT-211ENST00000513326 SRRTQ9BXP5 876 aaKnown RBP5.76□□□□□ -1.49
HTT-211ENST00000513326 TEX13BQ9BXU2 312 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms