RNA–Protein interactions for RNA: ENST00000512243.5

SNF8-211, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 863 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-211ENST00000512243 PCSK7Q16549 785 aa10.66□□□□□ -0.7
SNF8-211ENST00000512243 CEP55Q53EZ4 464 aa10.66□□□□□ -0.7
SNF8-211ENST00000512243 TTC38Q5R3I4 469 aa10.66□□□□□ -0.7
SNF8-211ENST00000512243 SEPT14Q6ZU15 432 aa10.66□□□□□ -0.7
SNF8-211ENST00000512243 NIPA1Q7RTP0 329 aa10.66□□□□□ -0.7
SNF8-211ENST00000512243 DMRTC2Q8IXT2 367 aaPredicted RBP10.66□□□□□ -0.7
SNF8-211ENST00000512243 SCFD2Q8WU76 684 aa10.66□□□□□ -0.7
SNF8-211ENST00000512243 CRYGNQ8WXF5 182 aa10.66□□□□□ -0.7
SNF8-211ENST00000512243 GPRASP2Q96D09 838 aa10.66□□□□□ -0.7
SNF8-211ENST00000512243 CDHR1Q96JP9 859 aa10.66□□□□□ -0.7
SNF8-211ENST00000512243 INPP4AQ96PE3 977 aaPredicted RBP10.66□□□□□ -0.7
SNF8-211ENST00000512243 MXRA8Q9BRK3 442 aa10.66□□□□□ -0.7
SNF8-211ENST00000512243 RTEL1Q9NZ71 1219 aa10.66□□□□□ -0.7
SNF8-211ENST00000512243 SEPT3Q9UH03 358 aa10.66□□□□□ -0.7
SNF8-211ENST00000512243 UBIAD1Q9Y5Z9 338 aa10.66□□□□□ -0.7
SNF8-211ENST00000512243 MRVI1Q9Y6F6 885 aa10.66□□□□□ -0.7
SNF8-211ENST00000512243 FIBPO43427 364 aa10.65□□□□□ -0.7
SNF8-211ENST00000512243 TDP2O95551 362 aa10.65□□□□□ -0.7
SNF8-211ENST00000512243 BRD1O95696 1058 aa10.65□□□□□ -0.7
SNF8-211ENST00000512243 ZNF865P0CJ78 1059 aaPredicted RBP10.65□□□□□ -0.7
SNF8-211ENST00000512243 AKR1A1P14550 325 aa10.65□□□□□ -0.7
SNF8-211ENST00000512243 CNGA1P29973 690 aa10.65□□□□□ -0.7
SNF8-211ENST00000512243 ORC2Q13416 577 aaPredicted RBP10.65□□□□□ -0.7
SNF8-211ENST00000512243 MTMR1Q13613 665 aa10.65□□□□□ -0.7
SNF8-211ENST00000512243 PKP1Q13835 747 aa10.65□□□□□ -0.7
SNF8-211ENST00000512243 TTLL4Q14679 1199 aa10.65□□□□□ -0.7
SNF8-211ENST00000512243 PRR16Q569H4 304 aa10.65□□□□□ -0.7
SNF8-211ENST00000512243 RILPL1Q5EBL4 403 aa10.65□□□□□ -0.7
SNF8-211ENST00000512243 PRAMEF19Q5SWL8 479 aa10.65□□□□□ -0.7
SNF8-211ENST00000512243 MAP3K21Q5TCX8 1036 aa10.65□□□□□ -0.7
SNF8-211ENST00000512243 KCNV1Q6PIU1 500 aa10.65□□□□□ -0.7
SNF8-211ENST00000512243 ELMSAN1Q6PJG2 1045 aa10.65□□□□□ -0.7
SNF8-211ENST00000512243 PLA2G4DQ86XP0 818 aa10.65□□□□□ -0.7
SNF8-211ENST00000512243 MCOLN1Q9GZU1 580 aa10.65□□□□□ -0.7
SNF8-211ENST00000512243 KATNBL1Q9H079 304 aa10.65□□□□□ -0.7
SNF8-211ENST00000512243 JADE2Q9NQC1 790 aa10.65□□□□□ -0.7
SNF8-211ENST00000512243 DDX25Q9UHL0 483 aaKnown RBP10.65□□□□□ -0.7
SNF8-211ENST00000512243 FAM184BQ9ULE4 1060 aa10.65□□□□□ -0.7
SNF8-211ENST00000512243 CYP3A7-CYP3A51PA0A087WV96 503 aa10.64□□□□□ -0.71
SNF8-211ENST00000512243 RBM47A0AV96 593 aaKnown RBP10.64□□□□□ -0.71
SNF8-211ENST00000512243 FAM86B1E9PN63 330 aa10.64□□□□□ -0.71
SNF8-211ENST00000512243 NKRFO15226 690 aaKnown RBP eCLIP10.64□□□□□ -0.71
SNF8-211ENST00000512243 SEPT4O43236 478 aa10.64□□□□□ -0.71
SNF8-211ENST00000512243 NEMFO60524 1076 aa10.64□□□□□ -0.71
SNF8-211ENST00000512243 MMP20O60882 483 aa10.64□□□□□ -0.71
SNF8-211ENST00000512243 FAM86B2P0C5J1 330 aa10.64□□□□□ -0.71
SNF8-211ENST00000512243 ITGB5P18084 799 aa10.64□□□□□ -0.71
SNF8-211ENST00000512243 CYP3A7P24462 503 aa10.64□□□□□ -0.71
SNF8-211ENST00000512243 ICAM3P32942 547 aa10.64□□□□□ -0.71
SNF8-211ENST00000512243 MCM7P33993 719 aa10.64□□□□□ -0.71
SNF8-211ENST00000512243 DDIT3P35638 169 aa10.64□□□□□ -0.71
SNF8-211ENST00000512243 SCNN1AP37088 669 aa10.64□□□□□ -0.71
SNF8-211ENST00000512243 ADCYAP1R1P41586 468 aa10.64□□□□□ -0.71
SNF8-211ENST00000512243 CCDC144BQ3MJ40 725 aa10.64□□□□□ -0.71
SNF8-211ENST00000512243 Q4G0T1 1027 aa10.64□□□□□ -0.71
SNF8-211ENST00000512243 PPP4R3AQ6IN85 833 aa10.64□□□□□ -0.71
SNF8-211ENST00000512243 TAPT1Q6NXT6 567 aa10.64□□□□□ -0.71
SNF8-211ENST00000512243 TRPV1Q8NER1 839 aa10.64□□□□□ -0.71
SNF8-211ENST00000512243 ARMC5Q96C12 935 aa10.64□□□□□ -0.71
SNF8-211ENST00000512243 NSUN5Q96P11 429 aaKnown RBP10.64□□□□□ -0.71
SNF8-211ENST00000512243 WDR11Q9BZH6 1224 aa10.64□□□□□ -0.71
SNF8-211ENST00000512243 PDGFCQ9NRA1 345 aa10.64□□□□□ -0.71
SNF8-211ENST00000512243 TCEAL9Q9UHQ7 104 aa10.64□□□□□ -0.71
SNF8-211ENST00000512243 IGLV3-22A0A075B6J6 115 aa10.63□□□□□ -0.71
SNF8-211ENST00000512243 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.63□□□□□ -0.71
SNF8-211ENST00000512243 MEIS1O00470 390 aa10.63□□□□□ -0.71
SNF8-211ENST00000512243 ZBTB39O15060 712 aa10.63□□□□□ -0.71
SNF8-211ENST00000512243 MAFGO15525 162 aa10.63□□□□□ -0.71
SNF8-211ENST00000512243 SLC37A4O43826 429 aa10.63□□□□□ -0.71
SNF8-211ENST00000512243 EDIL3O43854 480 aa10.63□□□□□ -0.71
SNF8-211ENST00000512243 MARCH6O60337 910 aa10.63□□□□□ -0.71
SNF8-211ENST00000512243 MSCO60682 206 aa10.63□□□□□ -0.71
SNF8-211ENST00000512243 ARIH2O95376 493 aa10.63□□□□□ -0.71
SNF8-211ENST00000512243 TXNP10599 105 aaKnown RBP10.63□□□□□ -0.71
SNF8-211ENST00000512243 TGFB3P10600 412 aa10.63□□□□□ -0.71
SNF8-211ENST00000512243 RARBP10826 455 aa10.63□□□□□ -0.71
SNF8-211ENST00000512243 UBA1P22314 1058 aaKnown RBP10.63□□□□□ -0.71
SNF8-211ENST00000512243 CCND3P30281 292 aaPredicted RBP10.63□□□□□ -0.71
SNF8-211ENST00000512243 NRLP54845 237 aa10.63□□□□□ -0.71
SNF8-211ENST00000512243 RAC1P63000 192 aa10.63□□□□□ -0.71
SNF8-211ENST00000512243 TNFAIP2Q03169 654 aa10.63□□□□□ -0.71
SNF8-211ENST00000512243 ZNF174Q15697 407 aa10.63□□□□□ -0.71
SNF8-211ENST00000512243 CALCRLQ16602 461 aa10.63□□□□□ -0.71
SNF8-211ENST00000512243 IQSEC1Q6DN90 963 aa10.63□□□□□ -0.71
SNF8-211ENST00000512243 CYP2W1Q8TAV3 490 aa10.63□□□□□ -0.71
SNF8-211ENST00000512243 ZNF333Q96JL9 665 aa10.63□□□□□ -0.71
SNF8-211ENST00000512243 MBOAT7Q96N66 472 aa10.63□□□□□ -0.71
SNF8-211ENST00000512243 ZNF396Q96N95 335 aaPredicted RBP10.63□□□□□ -0.71
SNF8-211ENST00000512243 ZNF577Q9BSK1 485 aa10.63□□□□□ -0.71
SNF8-211ENST00000512243 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.63□□□□□ -0.71
SNF8-211ENST00000512243 SMG9Q9H0W8 520 aaKnown RBP10.63□□□□□ -0.71
SNF8-211ENST00000512243 AGO4Q9HCK5 861 aaKnown RBP10.63□□□□□ -0.71
SNF8-211ENST00000512243 KCNH7Q9NS40 1196 aa10.63□□□□□ -0.71
SNF8-211ENST00000512243 CHMP5Q9NZZ3 219 aa10.63□□□□□ -0.71
SNF8-211ENST00000512243 CEP131Q9UPN4 1083 aa10.63□□□□□ -0.71
SNF8-211ENST00000512243 ATP6V1DQ9Y5K8 247 aa10.63□□□□□ -0.71
SNF8-211ENST00000512243 KAT6AQ92794 2004 aa10.63□□□□□ -0.71
SNF8-211ENST00000512243 J3QW42 95 aa10.62□□□□□ -0.71
SNF8-211ENST00000512243 BAG4O95429 457 aaKnown RBP10.62□□□□□ -0.71
SNF8-211ENST00000512243 GGPS1O95749 300 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms