RNA–Protein interactions for RNA: ENST00000486335.1

CCDC142-208, Transcript of coiled-coil domain containing 142, humanhuman

TSL 5

Gene CCDC142, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-208ENST00000486335 TRDNQ13061 729 aa10.44□□□□□ -0.74
CCDC142-208ENST00000486335 TOB2Q14106 344 aaPredicted RBP10.44□□□□□ -0.74
CCDC142-208ENST00000486335 RSPO4Q2I0M5 234 aaPredicted RBP10.44□□□□□ -0.74
CCDC142-208ENST00000486335 LRRC43Q8N309 656 aa10.44□□□□□ -0.74
CCDC142-208ENST00000486335 CUL5Q93034 780 aa10.44□□□□□ -0.74
CCDC142-208ENST00000486335 INTS4Q96HW7 963 aaKnown RBP10.44□□□□□ -0.74
CCDC142-208ENST00000486335 TMX3Q96JJ7 454 aa10.44□□□□□ -0.74
CCDC142-208ENST00000486335 PGBD1Q96JS3 809 aa10.44□□□□□ -0.74
CCDC142-208ENST00000486335 AZI2Q9H6S1 392 aa10.44□□□□□ -0.74
CCDC142-208ENST00000486335 LY9Q9HBG7 655 aa10.44□□□□□ -0.74
CCDC142-208ENST00000486335 DBR1Q9UK59 544 aaKnown RBP10.44□□□□□ -0.74
CCDC142-208ENST00000486335 FANCMQ8IYD8 2048 aa10.44□□□□□ -0.74
CCDC142-208ENST00000486335 DENND4AQ7Z401 1863 aa10.43□□□□□ -0.74
CCDC142-208ENST00000486335 A0A0U1RQF3 1178 aa10.43□□□□□ -0.74
CCDC142-208ENST00000486335 MEIS3P2A8K0S8 358 aa10.43□□□□□ -0.74
CCDC142-208ENST00000486335 LRRN2O75325 713 aa10.43□□□□□ -0.74
CCDC142-208ENST00000486335 DCNP07585 359 aaKnown RBP10.43□□□□□ -0.74
CCDC142-208ENST00000486335 FGFR4P22455 802 aa10.43□□□□□ -0.74
CCDC142-208ENST00000486335 TGM1P22735 817 aa10.43□□□□□ -0.74
CCDC142-208ENST00000486335 PPM1AP35813 382 aa10.43□□□□□ -0.74
CCDC142-208ENST00000486335 METAP2P50579 478 aaKnown RBP eCLIP10.43□□□□□ -0.74
CCDC142-208ENST00000486335 RALYLQ86SE5 291 aaKnown RBP10.43□□□□□ -0.74
CCDC142-208ENST00000486335 SLC44A3Q8N4M1 653 aa10.43□□□□□ -0.74
CCDC142-208ENST00000486335 HELQQ8TDG4 1101 aa10.43□□□□□ -0.74
CCDC142-208ENST00000486335 KCNG4Q8TDN1 519 aa10.43□□□□□ -0.74
CCDC142-208ENST00000486335 RRP36Q96EU6 259 aaKnown RBP10.43□□□□□ -0.74
CCDC142-208ENST00000486335 ZNF668Q96K58 619 aaPredicted RBP10.43□□□□□ -0.74
CCDC142-208ENST00000486335 MAP3K14Q99558 947 aa10.43□□□□□ -0.74
CCDC142-208ENST00000486335 NRDE2Q9H7Z3 1164 aa10.43□□□□□ -0.74
CCDC142-208ENST00000486335 SH2B1Q9NRF2 756 aaPredicted RBP10.43□□□□□ -0.74
CCDC142-208ENST00000486335 RNF216Q9NWF9 866 aaPredicted RBP10.43□□□□□ -0.74
CCDC142-208ENST00000486335 WNT16Q9UBV4 365 aa10.43□□□□□ -0.74
CCDC142-208ENST00000486335 DOCK8Q8NF50 2099 aa10.42□□□□□ -0.74
CCDC142-208ENST00000486335 EDIL3O43854 480 aa10.42□□□□□ -0.74
CCDC142-208ENST00000486335 CSDE1O75534 798 aaKnown RBP10.42□□□□□ -0.74
CCDC142-208ENST00000486335 PAPLNO95428 1278 aa10.42□□□□□ -0.74
CCDC142-208ENST00000486335 GALTP07902 379 aa10.42□□□□□ -0.74
CCDC142-208ENST00000486335 CFHP08603 1231 aa10.42□□□□□ -0.74
CCDC142-208ENST00000486335 DDIT3P35638 169 aa10.42□□□□□ -0.74
CCDC142-208ENST00000486335 SLC26A2P50443 739 aa10.42□□□□□ -0.74
CCDC142-208ENST00000486335 CLCN4P51793 760 aa10.42□□□□□ -0.74
CCDC142-208ENST00000486335 ATXN1P54253 815 aaKnown RBP10.42□□□□□ -0.74
CCDC142-208ENST00000486335 NLRP11P59045 1033 aaKnown RBP10.42□□□□□ -0.74
CCDC142-208ENST00000486335 PTPN14Q15678 1187 aa10.42□□□□□ -0.74
CCDC142-208ENST00000486335 ZNF484Q5JVG2 852 aa10.42□□□□□ -0.74
CCDC142-208ENST00000486335 SWSAP1Q6NVH7 229 aa10.42□□□□□ -0.74
CCDC142-208ENST00000486335 Q6ZUG5 572 aa10.42□□□□□ -0.74
CCDC142-208ENST00000486335 DDX53Q86TM3 631 aaKnown RBP10.42□□□□□ -0.74
CCDC142-208ENST00000486335 ZNF654Q8IZM8 581 aa10.42□□□□□ -0.74
CCDC142-208ENST00000486335 IGSF21Q96ID5 467 aa10.42□□□□□ -0.74
CCDC142-208ENST00000486335 TMEM87BQ96K49 555 aa10.42□□□□□ -0.74
CCDC142-208ENST00000486335 KLHL5Q96PQ7 755 aa10.42□□□□□ -0.74
CCDC142-208ENST00000486335 MYADMQ96S97 322 aa10.42□□□□□ -0.74
CCDC142-208ENST00000486335 TBC1D17Q9HA65 648 aa10.42□□□□□ -0.74
CCDC142-208ENST00000486335 DZANK1Q9NVP4 752 aa10.42□□□□□ -0.74
CCDC142-208ENST00000486335 MAFBQ9Y5Q3 323 aaPredicted RBP10.42□□□□□ -0.74
CCDC142-208ENST00000486335 COL1A2P08123 1366 aa10.41□□□□□ -0.74
CCDC142-208ENST00000486335 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.41□□□□□ -0.74
CCDC142-208ENST00000486335 FAM86B1E9PN63 330 aa10.41□□□□□ -0.74
CCDC142-208ENST00000486335 HOXA2O43364 376 aa10.41□□□□□ -0.74
CCDC142-208ENST00000486335 PRC1O43663 620 aa10.41□□□□□ -0.74
CCDC142-208ENST00000486335 EFEMP2O95967 443 aa10.41□□□□□ -0.74
CCDC142-208ENST00000486335 CNPP09543 421 aaKnown RBP10.41□□□□□ -0.74
CCDC142-208ENST00000486335 FAM86B2P0C5J1 330 aa10.41□□□□□ -0.74
CCDC142-208ENST00000486335 RXRAP19793 462 aa10.41□□□□□ -0.74
CCDC142-208ENST00000486335 EIF4BP23588 611 aaKnown RBP10.41□□□□□ -0.74
CCDC142-208ENST00000486335 LIFRP42702 1097 aa10.41□□□□□ -0.74
CCDC142-208ENST00000486335 CLCN3P51790 818 aa10.41□□□□□ -0.74
CCDC142-208ENST00000486335 AFF1P51825 1210 aaKnown RBP10.41□□□□□ -0.74
CCDC142-208ENST00000486335 ME3Q16798 604 aa10.41□□□□□ -0.74
CCDC142-208ENST00000486335 LETM2Q2VYF4 491 aa10.41□□□□□ -0.74
CCDC142-208ENST00000486335 CEP55Q53EZ4 464 aa10.41□□□□□ -0.74
CCDC142-208ENST00000486335 OTOP3Q7RTS5 596 aa10.41□□□□□ -0.74
CCDC142-208ENST00000486335 CATIPQ7Z7H3 387 aa10.41□□□□□ -0.74
CCDC142-208ENST00000486335 ZNF280BQ86YH2 543 aa10.41□□□□□ -0.74
CCDC142-208ENST00000486335 ST13P5Q8NFI4 369 aaPredicted RBP10.41□□□□□ -0.74
CCDC142-208ENST00000486335 CRYGNQ8WXF5 182 aa10.41□□□□□ -0.74
CCDC142-208ENST00000486335 RUBCNQ92622 972 aa10.41□□□□□ -0.74
CCDC142-208ENST00000486335 ZNF274Q96GC6 653 aaPredicted RBP10.41□□□□□ -0.74
CCDC142-208ENST00000486335 RPP25Q9BUL9 199 aaKnown RBP10.41□□□□□ -0.74
CCDC142-208ENST00000486335 IGSF9Q9P2J2 1179 aa10.41□□□□□ -0.74
CCDC142-208ENST00000486335 DNAJB4Q9UDY4 337 aa10.41□□□□□ -0.74
CCDC142-208ENST00000486335 FBXL21Q9UKT6 434 aa10.41□□□□□ -0.74
CCDC142-208ENST00000486335 TPCN1Q9ULQ1 816 aa10.41□□□□□ -0.74
CCDC142-208ENST00000486335 CA14Q9ULX7 337 aa10.41□□□□□ -0.74
CCDC142-208ENST00000486335 C2orf16Q68DN1 1984 aa10.41□□□□□ -0.74
CCDC142-208ENST00000486335 COL4A3Q01955 1670 aa10.41□□□□□ -0.74
CCDC142-208ENST00000486335 IGLV3-22A0A075B6J6 115 aa10.4□□□□□ -0.74
CCDC142-208ENST00000486335 DDX39AO00148 427 aaKnown RBP10.4□□□□□ -0.74
CCDC142-208ENST00000486335 ZNF862O60290 1169 aa10.4□□□□□ -0.74
CCDC142-208ENST00000486335 OFD1O75665 1012 aa10.4□□□□□ -0.74
CCDC142-208ENST00000486335 DARSP14868 501 aaKnown RBP10.4□□□□□ -0.74
CCDC142-208ENST00000486335 SLC11A1P49279 550 aa10.4□□□□□ -0.74
CCDC142-208ENST00000486335 POLGP54098 1239 aaPredicted RBP10.4□□□□□ -0.74
CCDC142-208ENST00000486335 TBC1D8BQ0IIM8 1120 aa10.4□□□□□ -0.74
CCDC142-208ENST00000486335 FUT2Q10981 343 aa10.4□□□□□ -0.74
CCDC142-208ENST00000486335 DRP2Q13474 957 aa10.4□□□□□ -0.74
CCDC142-208ENST00000486335 PDXDC2PQ6P474 469 aa10.4□□□□□ -0.74
CCDC142-208ENST00000486335 CCDC149Q6ZUS6 474 aa10.4□□□□□ -0.74
CCDC142-208ENST00000486335 TAS1R1Q7RTX1 841 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms